RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 ARHGEF11O15085 1522 aa23.98■■□□□ 1.43
NCKIPSD-207ENST00000453349 KIF21BO75037 1637 aa23.97■■□□□ 1.43
NCKIPSD-207ENST00000453349 RIMBP3CA6NJZ7 1639 aa23.95■■□□□ 1.43
NCKIPSD-207ENST00000453349 RIMBP3BA6NNM3 1639 aa23.95■■□□□ 1.43
NCKIPSD-207ENST00000453349 RIMBP3Q9UFD9 1639 aa23.95■■□□□ 1.43
NCKIPSD-207ENST00000453349 EHMT2Q96KQ7 1210 aa23.94■■□□□ 1.42
NCKIPSD-207ENST00000453349 SHROOM2Q13796 1616 aa23.94■■□□□ 1.42
NCKIPSD-207ENST00000453349 IQGAP2Q13576 1575 aa23.93■■□□□ 1.42
NCKIPSD-207ENST00000453349 PRG4Q92954 1404 aaPredicted RBP23.92■■□□□ 1.42
NCKIPSD-207ENST00000453349 CTTNBP2Q8WZ74 1663 aa23.91■■□□□ 1.42
NCKIPSD-207ENST00000453349 UBTFP17480 764 aaKnown RBP23.9■■□□□ 1.42
NCKIPSD-207ENST00000453349 GOLGA3Q08378 1498 aa23.88■■□□□ 1.41
NCKIPSD-207ENST00000453349 CYB5RLQ6IPT4 315 aa23.85■■□□□ 1.41
NCKIPSD-207ENST00000453349 CARMIL2Q6F5E8 1435 aa23.84■■□□□ 1.41
NCKIPSD-207ENST00000453349 ERCC6L2Q5T890 1561 aa23.83■■□□□ 1.41
NCKIPSD-207ENST00000453349 UGGT2Q9NYU1 1516 aa23.8■■□□□ 1.4
NCKIPSD-207ENST00000453349 ARAP1Q96P48 1450 aa23.79■■□□□ 1.4
NCKIPSD-207ENST00000453349 RANGAP1P46060 587 aaPredicted RBP23.76■■□□□ 1.39
NCKIPSD-207ENST00000453349 DISP1Q96F81 1524 aa23.73■■□□□ 1.39
NCKIPSD-207ENST00000453349 TNIKQ9UKE5 1360 aa23.72■■□□□ 1.39
NCKIPSD-207ENST00000453349 TTBK1Q5TCY1 1321 aaPredicted RBP23.71■■□□□ 1.39
NCKIPSD-207ENST00000453349 PTPRGP23470 1445 aa23.69■■□□□ 1.38
NCKIPSD-207ENST00000453349 KIAA0556O60303 1618 aa23.68■■□□□ 1.38
NCKIPSD-207ENST00000453349 P3H3Q8IVL6 736 aa23.67■■□□□ 1.38
NCKIPSD-207ENST00000453349 LOC105371045A0A1W2PR82 267 aa23.64■■□□□ 1.37
NCKIPSD-207ENST00000453349 SAMD9Q5K651 1589 aa23.6■■□□□ 1.37
NCKIPSD-207ENST00000453349 EFCAB5A4FU69 1503 aa23.57■■□□□ 1.36
NCKIPSD-207ENST00000453349 NPM1P06748 294 aaKnown RBP eCLIP23.54■■□□□ 1.36
NCKIPSD-207ENST00000453349 UACAQ9BZF9 1416 aa23.52■■□□□ 1.36
NCKIPSD-207ENST00000453349 FHOD3Q2V2M9 1422 aa23.5■■□□□ 1.35
NCKIPSD-207ENST00000453349 ARHGAP35Q9NRY4 1499 aa23.49■■□□□ 1.35
NCKIPSD-207ENST00000453349 CLIP1P30622 1438 aa23.47■■□□□ 1.35
NCKIPSD-207ENST00000453349 UHRF1BP1LA0JNW5 1464 aa23.46■■□□□ 1.35
NCKIPSD-207ENST00000453349 ADCY10Q96PN6 1610 aa23.46■■□□□ 1.35
NCKIPSD-207ENST00000453349 PLB1Q6P1J6 1458 aa23.44■■□□□ 1.34
NCKIPSD-207ENST00000453349 ABCC2Q92887 1545 aa23.43■■□□□ 1.34
NCKIPSD-207ENST00000453349 ABCA8O94911 1581 aa23.41■■□□□ 1.34
NCKIPSD-207ENST00000453349 CEP162Q5TB80 1403 aa23.41■■□□□ 1.34
NCKIPSD-207ENST00000453349 FMN1Q68DA7 1419 aa23.4■■□□□ 1.34
NCKIPSD-207ENST00000453349 RAPGEF6Q8TEU7 1601 aa23.36■■□□□ 1.33
NCKIPSD-207ENST00000453349 ATP1B4Q9UN42 357 aaPredicted RBP23.34■■□□□ 1.33
NCKIPSD-207ENST00000453349 KDM5BQ9UGL1 1544 aa23.33■■□□□ 1.33
NCKIPSD-207ENST00000453349 TRHP20396 242 aaPredicted RBP23.32■■□□□ 1.32
NCKIPSD-207ENST00000453349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.31■■□□□ 1.32
NCKIPSD-207ENST00000453349 HNRNPUL2Q1KMD3 747 aaKnown RBP23.31■■□□□ 1.32
NCKIPSD-207ENST00000453349 ARID3CA6NKF2 412 aa23.3■■□□□ 1.32
NCKIPSD-207ENST00000453349 ZCCHC11Q5TAX3 1644 aaKnown RBP23.28■■□□□ 1.32
NCKIPSD-207ENST00000453349 MAPKBP1O60336 1514 aa23.28■■□□□ 1.32
NCKIPSD-207ENST00000453349 ATP10BO94823 1461 aa23.26■■□□□ 1.31
NCKIPSD-207ENST00000453349 NUP153P49790 1475 aaKnown RBP23.25■■□□□ 1.31
NCKIPSD-207ENST00000453349 ASXL2Q76L83 1435 aa23.24■■□□□ 1.31
NCKIPSD-207ENST00000453349 CASKIN1Q8WXD9 1431 aa23.22■■□□□ 1.31
NCKIPSD-207ENST00000453349 HECW1Q76N89 1606 aa23.22■■□□□ 1.31
NCKIPSD-207ENST00000453349 PLEKHD1A6NEE1 506 aa23.18■■□□□ 1.3
NCKIPSD-207ENST00000453349 FAM69CQ0P6D2 419 aa23.18■■□□□ 1.3
NCKIPSD-207ENST00000453349 PCF11O94913 1555 aaKnown RBP23.16■■□□□ 1.3
NCKIPSD-207ENST00000453349 KCNH8Q96L42 1107 aa23.16■■□□□ 1.3
NCKIPSD-207ENST00000453349 ABCC10Q5T3U5 1492 aa23.16■■□□□ 1.3
NCKIPSD-207ENST00000453349 FYCO1Q9BQS8 1478 aa23.16■■□□□ 1.3
NCKIPSD-207ENST00000453349 EPRSP07814 1512 aaKnown RBP23.15■■□□□ 1.3
NCKIPSD-207ENST00000453349 CDK11AQ9UQ88 783 aaPredicted RBP23.15■■□□□ 1.3
NCKIPSD-207ENST00000453349 WDR7Q9Y4E6 1490 aa23.14■■□□□ 1.29
NCKIPSD-207ENST00000453349 CDK13Q14004 1512 aaKnown RBP23.12■■□□□ 1.29
NCKIPSD-207ENST00000453349 VPS8Q8N3P4 1428 aa23.11■■□□□ 1.29
NCKIPSD-207ENST00000453349 CCDC18Q5T9S5 1454 aa23.11■■□□□ 1.29
NCKIPSD-207ENST00000453349 DIP2BQ9P265 1576 aa23.09■■□□□ 1.29
NCKIPSD-207ENST00000453349 KIF13AQ9H1H9 1805 aa23.06■■□□□ 1.28
NCKIPSD-207ENST00000453349 LRRIQ1Q96JM4 1722 aa23.06■■□□□ 1.28
NCKIPSD-207ENST00000453349 GLI2P10070 1586 aa23.05■■□□□ 1.28
NCKIPSD-207ENST00000453349 APLP2Q06481 763 aa23■■□□□ 1.27
NCKIPSD-207ENST00000453349 TROQ12816 1431 aaPredicted RBP22.98■■□□□ 1.27
NCKIPSD-207ENST00000453349 CD109Q6YHK3 1445 aa22.95■■□□□ 1.26
NCKIPSD-207ENST00000453349 MAP3K4Q9Y6R4 1608 aa22.93■■□□□ 1.26
NCKIPSD-207ENST00000453349 MTUS2Q5JR59 1369 aa22.93■■□□□ 1.26
NCKIPSD-207ENST00000453349 CFAP43Q8NDM7 1665 aa22.93■■□□□ 1.26
NCKIPSD-207ENST00000453349 TSPOAP1O95153 1857 aa22.92■■□□□ 1.26
NCKIPSD-207ENST00000453349 ABCA9Q8IUA7 1624 aa22.91■■□□□ 1.26
NCKIPSD-207ENST00000453349 KIF14Q15058 1648 aa22.9■■□□□ 1.26
NCKIPSD-207ENST00000453349 TIAM1Q13009 1591 aa22.89■■□□□ 1.26
NCKIPSD-207ENST00000453349 MAP3K1Q13233 1512 aa22.89■■□□□ 1.26
NCKIPSD-207ENST00000453349 MAGI3Q5TCQ9 1506 aa22.89■■□□□ 1.26
NCKIPSD-207ENST00000453349 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.89■■□□□ 1.26
NCKIPSD-207ENST00000453349 TEX14Q8IWB6 1497 aa22.87■■□□□ 1.25
NCKIPSD-207ENST00000453349 EHBP1L1Q8N3D4 1523 aa22.83■■□□□ 1.25
NCKIPSD-207ENST00000453349 PPRC1Q5VV67 1664 aaKnown RBP22.82■■□□□ 1.24
NCKIPSD-207ENST00000453349 TTC37Q6PGP7 1564 aa22.81■■□□□ 1.24
NCKIPSD-207ENST00000453349 LRRC9Q6ZRR7 1453 aa22.81■■□□□ 1.24
NCKIPSD-207ENST00000453349 KANK4Q5T7N3 995 aaPredicted RBP22.81■■□□□ 1.24
NCKIPSD-207ENST00000453349 PLCH2O75038 1416 aa22.8■■□□□ 1.24
NCKIPSD-207ENST00000453349 EFCAB2Q5VUJ9 269 aa22.77■■□□□ 1.24
NCKIPSD-207ENST00000453349 PHLDB1Q86UU1 1377 aa22.76■■□□□ 1.23
NCKIPSD-207ENST00000453349 MYO5CQ9NQX4 1742 aa22.76■■□□□ 1.23
NCKIPSD-207ENST00000453349 CCNB3Q8WWL7 1395 aa22.76■■□□□ 1.23
NCKIPSD-207ENST00000453349 SUPT6HQ7KZ85 1726 aaKnown RBP22.75■■□□□ 1.23
NCKIPSD-207ENST00000453349 FANCAO15360 1455 aa22.73■■□□□ 1.23
NCKIPSD-207ENST00000453349 NEO1Q92859 1461 aa22.73■■□□□ 1.23
NCKIPSD-207ENST00000453349 ARAP3Q8WWN8 1544 aa22.72■■□□□ 1.23
NCKIPSD-207ENST00000453349 NCOA2Q15596 1464 aa22.71■■□□□ 1.23
NCKIPSD-207ENST00000453349 ARHGAP5Q13017 1502 aa22.71■■□□□ 1.23
NCKIPSD-207ENST00000453349 CFAP74Q9C0B2 1584 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms