RNA–Protein interactions for RNA: ENST00000453246.5

ABCA13-205, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 4,275 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-205ENST00000453246 SUPT16HQ9Y5B9 1047 aaKnown RBP13.59□□□□□ -0.23
ABCA13-205ENST00000453246 ANP32EQ9BTT0 268 aa13.56□□□□□ -0.24
ABCA13-205ENST00000453246 RAB3GAP2Q9H2M9 1393 aa13.55□□□□□ -0.24
ABCA13-205ENST00000453246 DHX57Q6P158 1386 aaKnown RBP13.53□□□□□ -0.24
ABCA13-205ENST00000453246 MRS2Q9HD23 443 aa13.52□□□□□ -0.25
ABCA13-205ENST00000453246 EIF4G2P78344 907 aaKnown RBP eCLIP13.51□□□□□ -0.25
ABCA13-205ENST00000453246 RTL5Q5HYW3 569 aaPredicted RBP13.51□□□□□ -0.25
ABCA13-205ENST00000453246 SETD5Q9C0A6 1442 aa13.51□□□□□ -0.25
ABCA13-205ENST00000453246 FHAD1B1AJZ9 1412 aa13.5□□□□□ -0.25
ABCA13-205ENST00000453246 DAXXQ9UER7 740 aaPredicted RBP13.49□□□□□ -0.25
ABCA13-205ENST00000453246 SENP3-EIF4A1A0A087X0R7 540 aa13.48□□□□□ -0.25
ABCA13-205ENST00000453246 KCNH8Q96L42 1107 aa13.48□□□□□ -0.25
ABCA13-205ENST00000453246 SALL2Q9Y467 1007 aaPredicted RBP13.47□□□□□ -0.25
ABCA13-205ENST00000453246 BCL11AQ9H165 835 aa13.46□□□□□ -0.25
ABCA13-205ENST00000453246 KDM2AQ9Y2K7 1162 aa13.45□□□□□ -0.26
ABCA13-205ENST00000453246 SYNJ1O43426 1573 aa13.43□□□□□ -0.26
ABCA13-205ENST00000453246 KIF21BO75037 1637 aa13.42□□□□□ -0.26
ABCA13-205ENST00000453246 TMC1Q8TDI8 760 aa13.41□□□□□ -0.26
ABCA13-205ENST00000453246 FHOD3Q2V2M9 1422 aa13.4□□□□□ -0.26
ABCA13-205ENST00000453246 TIMELESSQ9UNS1 1208 aa13.4□□□□□ -0.26
ABCA13-205ENST00000453246 ARHGAP35Q9NRY4 1499 aa13.4□□□□□ -0.27
ABCA13-205ENST00000453246 PPP1R15AO75807 674 aaPredicted RBP13.39□□□□□ -0.27
ABCA13-205ENST00000453246 TDRD9Q8NDG6 1382 aaKnown RBP13.39□□□□□ -0.27
ABCA13-205ENST00000453246 CADPSQ9ULU8 1353 aa13.38□□□□□ -0.27
ABCA13-205ENST00000453246 FOXD1Q16676 465 aa13.38□□□□□ -0.27
ABCA13-205ENST00000453246 CHMP7Q8WUX9 453 aaPredicted RBP13.38□□□□□ -0.27
ABCA13-205ENST00000453246 NBR1Q14596 966 aa13.38□□□□□ -0.27
ABCA13-205ENST00000453246 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.38□□□□□ -0.27
ABCA13-205ENST00000453246 TSHZ2Q9NRE2 1034 aa13.37□□□□□ -0.27
ABCA13-205ENST00000453246 TSPY4P0CV99 314 aa13.36□□□□□ -0.27
ABCA13-205ENST00000453246 TSPY10P0CW01 314 aa13.36□□□□□ -0.27
ABCA13-205ENST00000453246 NPM2Q86SE8 214 aaKnown RBP13.36□□□□□ -0.27
ABCA13-205ENST00000453246 CCDC136Q96JN2 1154 aa13.36□□□□□ -0.27
ABCA13-205ENST00000453246 IGF1RP08069 1367 aa13.34□□□□□ -0.27
ABCA13-205ENST00000453246 PLPPR3Q6T4P5 718 aa13.34□□□□□ -0.27
ABCA13-205ENST00000453246 CFDP1Q9UEE9 299 aaPredicted RBP13.34□□□□□ -0.27
ABCA13-205ENST00000453246 ARAP1Q96P48 1450 aa13.34□□□□□ -0.27
ABCA13-205ENST00000453246 ANP32AP39687 249 aaKnown RBP13.33□□□□□ -0.27
ABCA13-205ENST00000453246 CCER2I3L3R5 266 aa13.33□□□□□ -0.28
ABCA13-205ENST00000453246 HSPA5P11021 654 aaKnown RBP13.33□□□□□ -0.28
ABCA13-205ENST00000453246 EIF4G1Q04637 1599 aaKnown RBP13.33□□□□□ -0.28
ABCA13-205ENST00000453246 SLC24A1O60721 1099 aa13.3□□□□□ -0.28
ABCA13-205ENST00000453246 RGL3Q3MIN7 710 aa13.3□□□□□ -0.28
ABCA13-205ENST00000453246 FMN1Q68DA7 1419 aa13.29□□□□□ -0.28
ABCA13-205ENST00000453246 RBM19Q9Y4C8 960 aaKnown RBP13.28□□□□□ -0.28
ABCA13-205ENST00000453246 PLEKHD1A6NEE1 506 aa13.27□□□□□ -0.28
ABCA13-205ENST00000453246 PHLDB1Q86UU1 1377 aa13.27□□□□□ -0.28
ABCA13-205ENST00000453246 B4GALNT3Q6L9W6 998 aa13.26□□□□□ -0.29
ABCA13-205ENST00000453246 PRXQ9BXM0 1461 aa13.26□□□□□ -0.29
ABCA13-205ENST00000453246 MPHOSPH9Q99550 1183 aa13.25□□□□□ -0.29
ABCA13-205ENST00000453246 CARD11Q9BXL7 1154 aa13.25□□□□□ -0.29
ABCA13-205ENST00000453246 FGD5Q6ZNL6 1462 aa13.24□□□□□ -0.29
ABCA13-205ENST00000453246 L3MBTL2Q969R5 705 aa13.24□□□□□ -0.29
ABCA13-205ENST00000453246 NCAPD3P42695 1498 aa13.24□□□□□ -0.29
ABCA13-205ENST00000453246 PPP4R2Q9NY27 417 aa13.22□□□□□ -0.29
ABCA13-205ENST00000453246 FANCD2Q9BXW9 1451 aa13.22□□□□□ -0.29
ABCA13-205ENST00000453246 RRBP1Q9P2E9 1410 aaKnown RBP13.21□□□□□ -0.29
ABCA13-205ENST00000453246 RAD54L2Q9Y4B4 1467 aa13.21□□□□□ -0.29
ABCA13-205ENST00000453246 CANXP27824 592 aaKnown RBP13.21□□□□□ -0.29
ABCA13-205ENST00000453246 ERICH3Q5RHP9 1530 aa13.21□□□□□ -0.3
ABCA13-205ENST00000453246 TOP2BQ02880 1626 aa13.2□□□□□ -0.3
ABCA13-205ENST00000453246 EIF5BO60841 1220 aaKnown RBP13.19□□□□□ -0.3
ABCA13-205ENST00000453246 CHGAP10645 457 aaKnown RBP13.19□□□□□ -0.3
ABCA13-205ENST00000453246 LRRC9Q6ZRR7 1453 aa13.19□□□□□ -0.3
ABCA13-205ENST00000453246 BICRAQ9NZM4 1560 aa13.18□□□□□ -0.3
ABCA13-205ENST00000453246 CUX1P39880 1505 aa13.18□□□□□ -0.3
ABCA13-205ENST00000453246 ZBTB47Q9UFB7 747 aaPredicted RBP13.18□□□□□ -0.3
ABCA13-205ENST00000453246 PKD2Q13563 968 aa13.17□□□□□ -0.3
ABCA13-205ENST00000453246 CFTRP13569 1480 aa13.16□□□□□ -0.3
ABCA13-205ENST00000453246 DCAF11Q8TEB1 546 aa13.16□□□□□ -0.3
ABCA13-205ENST00000453246 CCDC18Q5T9S5 1454 aa13.15□□□□□ -0.3
ABCA13-205ENST00000453246 PDS5BQ9NTI5 1447 aa13.15□□□□□ -0.3
ABCA13-205ENST00000453246 WDR43Q15061 677 aaKnown RBP eCLIP13.13□□□□□ -0.31
ABCA13-205ENST00000453246 FGD6Q6ZV73 1430 aa13.12□□□□□ -0.31
ABCA13-205ENST00000453246 RTN4Q9NQC3 1192 aaKnown RBP13.11□□□□□ -0.31
ABCA13-205ENST00000453246 CC2D1BQ5T0F9 858 aaKnown RBP13.1□□□□□ -0.31
ABCA13-205ENST00000453246 DEKP35659 375 aaKnown RBP13.07□□□□□ -0.32
ABCA13-205ENST00000453246 SENP3Q9H4L4 574 aaPredicted RBP13.07□□□□□ -0.32
ABCA13-205ENST00000453246 PRKRIP1Q9H875 184 aaPredicted RBP13.07□□□□□ -0.32
ABCA13-205ENST00000453246 NUP155O75694 1391 aa13.06□□□□□ -0.32
ABCA13-205ENST00000453246 ZNF644Q9H582 1327 aaPredicted RBP13.06□□□□□ -0.32
ABCA13-205ENST00000453246 ESF1Q9H501 851 aaKnown RBP13.05□□□□□ -0.32
ABCA13-205ENST00000453246 UACAQ9BZF9 1416 aa13.05□□□□□ -0.32
ABCA13-205ENST00000453246 ERCC6Q03468 1493 aa13.05□□□□□ -0.32
ABCA13-205ENST00000453246 CASKIN1Q8WXD9 1431 aa13.05□□□□□ -0.32
ABCA13-205ENST00000453246 GAPVD1Q14C86 1478 aa13.04□□□□□ -0.32
ABCA13-205ENST00000453246 MYOM3Q5VTT5 1437 aa13.04□□□□□ -0.32
ABCA13-205ENST00000453246 UNC13AQ9UPW8 1703 aa13.04□□□□□ -0.32
ABCA13-205ENST00000453246 KNSTRNQ9Y448 316 aa13.03□□□□□ -0.32
ABCA13-205ENST00000453246 TIAM1Q13009 1591 aa13.03□□□□□ -0.32
ABCA13-205ENST00000453246 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.03□□□□□ -0.32
ABCA13-205ENST00000453246 WDR97A6NE52 1622 aa13.03□□□□□ -0.32
ABCA13-205ENST00000453246 PEG3Q9GZU2 1588 aa13.03□□□□□ -0.32
ABCA13-205ENST00000453246 WASHC2AQ641Q2 1341 aa13.02□□□□□ -0.33
ABCA13-205ENST00000453246 NESP48681 1621 aa13.02□□□□□ -0.33
ABCA13-205ENST00000453246 HMGXB3Q12766 1538 aa13.02□□□□□ -0.33
ABCA13-205ENST00000453246 NCOA2Q15596 1464 aa13.01□□□□□ -0.33
ABCA13-205ENST00000453246 HNRNPMP52272 730 aaKnown RBP eCLIP13.01□□□□□ -0.33
ABCA13-205ENST00000453246 NOP58Q9Y2X3 529 aaKnown RBP13.01□□□□□ -0.33
ABCA13-205ENST00000453246 ANKRD30AQ9BXX3 1397 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms