RNA–Protein interactions for RNA: ENST00000452490.3

CASP7-207, Transcript of caspase 7, humanhuman

TSL 2 BASIC

Gene CASP7, Length 2,271 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7-207ENST00000452490 LAMC3Q9Y6N6 1575 aa12.86□□□□□ -0.35
CASP7-207ENST00000452490 YTHDC1Q96MU7 727 aaKnown RBP12.85□□□□□ -0.35
CASP7-207ENST00000452490 RANGAP1P46060 587 aaPredicted RBP12.85□□□□□ -0.35
CASP7-207ENST00000452490 ARHGAP35Q9NRY4 1499 aa12.84□□□□□ -0.35
CASP7-207ENST00000452490 MIER1Q8N108 512 aa12.84□□□□□ -0.35
CASP7-207ENST00000452490 CARMIL1Q5VZK9 1371 aa12.84□□□□□ -0.35
CASP7-207ENST00000452490 ABCA10Q8WWZ4 1543 aa12.83□□□□□ -0.36
CASP7-207ENST00000452490 TOPBP1Q92547 1522 aa12.83□□□□□ -0.36
CASP7-207ENST00000452490 POLA1P09884 1462 aaPredicted RBP12.79□□□□□ -0.36
CASP7-207ENST00000452490 NESP48681 1621 aa12.79□□□□□ -0.36
CASP7-207ENST00000452490 CUL7Q14999 1698 aa12.79□□□□□ -0.36
CASP7-207ENST00000452490 MAP3K1Q13233 1512 aa12.78□□□□□ -0.36
CASP7-207ENST00000452490 HNRNPUL2Q1KMD3 747 aaKnown RBP12.76□□□□□ -0.37
CASP7-207ENST00000452490 WDR97A6NE52 1622 aa12.76□□□□□ -0.37
CASP7-207ENST00000452490 RRBP1Q9P2E9 1410 aaKnown RBP12.75□□□□□ -0.37
CASP7-207ENST00000452490 RAD54L2Q9Y4B4 1467 aa12.75□□□□□ -0.37
CASP7-207ENST00000452490 PDS5BQ9NTI5 1447 aa12.74□□□□□ -0.37
CASP7-207ENST00000452490 RTN4Q9NQC3 1192 aaKnown RBP12.73□□□□□ -0.37
CASP7-207ENST00000452490 URB2Q14146 1524 aaKnown RBP12.73□□□□□ -0.37
CASP7-207ENST00000452490 TIAM1Q13009 1591 aa12.72□□□□□ -0.37
CASP7-207ENST00000452490 EFCAB5A4FU69 1503 aa12.72□□□□□ -0.37
CASP7-207ENST00000452490 FHAD1B1AJZ9 1412 aa12.72□□□□□ -0.37
CASP7-207ENST00000452490 KANK4Q5T7N3 995 aaPredicted RBP12.72□□□□□ -0.37
CASP7-207ENST00000452490 CTTNBP2Q8WZ74 1663 aa12.71□□□□□ -0.38
CASP7-207ENST00000452490 ABCA5Q8WWZ7 1642 aa12.7□□□□□ -0.38
CASP7-207ENST00000452490 CLSPNQ9HAW4 1339 aa12.68□□□□□ -0.38
CASP7-207ENST00000452490 CFAP43Q8NDM7 1665 aa12.68□□□□□ -0.38
CASP7-207ENST00000452490 CCNB3Q8WWL7 1395 aa12.66□□□□□ -0.38
CASP7-207ENST00000452490 KIF21AQ7Z4S6 1674 aa12.66□□□□□ -0.38
CASP7-207ENST00000452490 AQRO60306 1485 aaKnown RBP eCLIP12.65□□□□□ -0.38
CASP7-207ENST00000452490 PCF11O94913 1555 aaKnown RBP12.65□□□□□ -0.38
CASP7-207ENST00000452490 LRRC9Q6ZRR7 1453 aa12.64□□□□□ -0.39
CASP7-207ENST00000452490 FYCO1Q9BQS8 1478 aa12.64□□□□□ -0.39
CASP7-207ENST00000452490 SUPT16HQ9Y5B9 1047 aaKnown RBP12.63□□□□□ -0.39
CASP7-207ENST00000452490 GAPVD1Q14C86 1478 aa12.63□□□□□ -0.39
CASP7-207ENST00000452490 CASKIN1Q8WXD9 1431 aa12.61□□□□□ -0.39
CASP7-207ENST00000452490 TARBP1Q13395 1621 aaKnown RBP12.61□□□□□ -0.39
CASP7-207ENST00000452490 DHX57Q6P158 1386 aaKnown RBP12.6□□□□□ -0.39
CASP7-207ENST00000452490 CNKSR2Q8WXI2 1034 aa12.59□□□□□ -0.39
CASP7-207ENST00000452490 FHOD3Q2V2M9 1422 aa12.59□□□□□ -0.39
CASP7-207ENST00000452490 FMN1Q68DA7 1419 aa12.59□□□□□ -0.39
CASP7-207ENST00000452490 AMER1Q5JTC6 1135 aaPredicted RBP12.59□□□□□ -0.39
CASP7-207ENST00000452490 SAMD9Q5K651 1589 aa12.59□□□□□ -0.39
CASP7-207ENST00000452490 TDRD9Q8NDG6 1382 aaKnown RBP12.58□□□□□ -0.4
CASP7-207ENST00000452490 TSHZ2Q9NRE2 1034 aa12.56□□□□□ -0.4
CASP7-207ENST00000452490 MRC2Q9UBG0 1479 aa12.56□□□□□ -0.4
CASP7-207ENST00000452490 PBRM1Q86U86 1689 aa12.55□□□□□ -0.4
CASP7-207ENST00000452490 DNAJC5BQ9UF47 199 aa12.54□□□□□ -0.4
CASP7-207ENST00000452490 THOC2Q8NI27 1593 aaKnown RBP12.54□□□□□ -0.4
CASP7-207ENST00000452490 SNAPC4Q5SXM2 1469 aa12.54□□□□□ -0.4
CASP7-207ENST00000452490 P3H3Q8IVL6 736 aa12.54□□□□□ -0.4
CASP7-207ENST00000452490 ANP32EQ9BTT0 268 aa12.54□□□□□ -0.4
CASP7-207ENST00000452490 FOXD4L1Q9NU39 408 aa12.54□□□□□ -0.4
CASP7-207ENST00000452490 PHLDB1Q86UU1 1377 aa12.53□□□□□ -0.4
CASP7-207ENST00000452490 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.53□□□□□ -0.4
CASP7-207ENST00000452490 ADAMTS12P58397 1594 aa12.5□□□□□ -0.41
CASP7-207ENST00000452490 SETD5Q9C0A6 1442 aa12.49□□□□□ -0.41
CASP7-207ENST00000452490 GRIN2BQ13224 1484 aa12.48□□□□□ -0.41
CASP7-207ENST00000452490 RAB3GAP2Q9H2M9 1393 aa12.48□□□□□ -0.41
CASP7-207ENST00000452490 ATP1B4Q9UN42 357 aaPredicted RBP12.48□□□□□ -0.41
CASP7-207ENST00000452490 IFT140Q96RY7 1462 aa12.47□□□□□ -0.41
CASP7-207ENST00000452490 WDR62O43379 1518 aa12.47□□□□□ -0.41
CASP7-207ENST00000452490 ITGAEP38570 1179 aa12.46□□□□□ -0.42
CASP7-207ENST00000452490 IQGAP2Q13576 1575 aa12.46□□□□□ -0.42
CASP7-207ENST00000452490 LRRIQ1Q96JM4 1722 aa12.45□□□□□ -0.42
CASP7-207ENST00000452490 CCDC18Q5T9S5 1454 aa12.45□□□□□ -0.42
CASP7-207ENST00000452490 EHBP1L1Q8N3D4 1523 aa12.45□□□□□ -0.42
CASP7-207ENST00000452490 FAM50AQ14320 339 aaKnown RBP12.44□□□□□ -0.42
CASP7-207ENST00000452490 MTUS2Q5JR59 1369 aa12.44□□□□□ -0.42
CASP7-207ENST00000452490 FGD6Q6ZV73 1430 aa12.44□□□□□ -0.42
CASP7-207ENST00000452490 SUPT6HQ7KZ85 1726 aaKnown RBP12.43□□□□□ -0.42
CASP7-207ENST00000452490 HECW1Q76N89 1606 aa12.43□□□□□ -0.42
CASP7-207ENST00000452490 MAPKBP1O60336 1514 aa12.43□□□□□ -0.42
CASP7-207ENST00000452490 BCL11AQ9H165 835 aa12.42□□□□□ -0.42
CASP7-207ENST00000452490 UGGT2Q9NYU1 1516 aa12.4□□□□□ -0.42
CASP7-207ENST00000452490 NCOA2Q15596 1464 aa12.39□□□□□ -0.43
CASP7-207ENST00000452490 MYOM3Q5VTT5 1437 aa12.39□□□□□ -0.43
CASP7-207ENST00000452490 ARHGEF11O15085 1522 aa12.38□□□□□ -0.43
CASP7-207ENST00000452490 PRKCSHP14314 528 aaPredicted RBP12.36□□□□□ -0.43
CASP7-207ENST00000452490 ZNF608Q9ULD9 1512 aaPredicted RBP12.36□□□□□ -0.43
CASP7-207ENST00000452490 EIF4G3O43432 1585 aaKnown RBP12.36□□□□□ -0.43
CASP7-207ENST00000452490 KIAA0586Q9BVV6 1533 aa12.36□□□□□ -0.43
CASP7-207ENST00000452490 TIMELESSQ9UNS1 1208 aa12.35□□□□□ -0.43
CASP7-207ENST00000452490 PTPN23Q9H3S7 1636 aa12.34□□□□□ -0.43
CASP7-207ENST00000452490 EPRSP07814 1512 aaKnown RBP12.34□□□□□ -0.43
CASP7-207ENST00000452490 KCNH8Q96L42 1107 aa12.34□□□□□ -0.43
CASP7-207ENST00000452490 HFM1A2PYH4 1435 aa12.34□□□□□ -0.43
CASP7-207ENST00000452490 MAGI3Q5TCQ9 1506 aa12.33□□□□□ -0.44
CASP7-207ENST00000452490 ERCC6Q03468 1493 aa12.33□□□□□ -0.44
CASP7-207ENST00000452490 TCOF1Q13428 1488 aaKnown RBP12.33□□□□□ -0.44
CASP7-207ENST00000452490 KIAA0556O60303 1618 aa12.33□□□□□ -0.44
CASP7-207ENST00000452490 GRIN2AQ12879 1464 aa12.32□□□□□ -0.44
CASP7-207ENST00000452490 MAGI1Q96QZ7 1491 aaPredicted RBP12.32□□□□□ -0.44
CASP7-207ENST00000452490 ERICH6Q7L0X2 663 aa12.3□□□□□ -0.44
CASP7-207ENST00000452490 MIA2Q96PC5 1412 aa12.3□□□□□ -0.44
CASP7-207ENST00000452490 PTPRKQ15262 1439 aa12.29□□□□□ -0.44
CASP7-207ENST00000452490 DISP1Q96F81 1524 aa12.29□□□□□ -0.44
CASP7-207ENST00000452490 UACAQ9BZF9 1416 aa12.29□□□□□ -0.44
CASP7-207ENST00000452490 AKNAQ7Z591 1439 aa12.28□□□□□ -0.44
CASP7-207ENST00000452490 BCANQ96GW7 911 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms