RNA–Protein interactions for RNA: ENST00000450829.5

TM9SF4-205, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 550 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-205ENST00000450829 GOLGA3Q08378 1498 aa9.38□□□□□ -0.91
TM9SF4-205ENST00000450829 GRIN2AQ12879 1464 aa9.38□□□□□ -0.91
TM9SF4-205ENST00000450829 ERCC6L2Q5T890 1561 aa9.37□□□□□ -0.91
TM9SF4-205ENST00000450829 SHROOM2Q13796 1616 aa9.37□□□□□ -0.91
TM9SF4-205ENST00000450829 ERICH3Q5RHP9 1530 aa9.36□□□□□ -0.91
TM9SF4-205ENST00000450829 CHMP7Q8WUX9 453 aaPredicted RBP9.36□□□□□ -0.91
TM9SF4-205ENST00000450829 NUP160Q12769 1436 aa9.35□□□□□ -0.91
TM9SF4-205ENST00000450829 KIF27Q86VH2 1401 aa9.32□□□□□ -0.92
TM9SF4-205ENST00000450829 FHAD1B1AJZ9 1412 aa9.31□□□□□ -0.92
TM9SF4-205ENST00000450829 CSRNP3Q8WYN3 585 aa9.31□□□□□ -0.92
TM9SF4-205ENST00000450829 CUL7Q14999 1698 aa9.31□□□□□ -0.92
TM9SF4-205ENST00000450829 PRXQ9BXM0 1461 aa9.3□□□□□ -0.92
TM9SF4-205ENST00000450829 TNIKQ9UKE5 1360 aa9.3□□□□□ -0.92
TM9SF4-205ENST00000450829 RAPGEF2Q9Y4G8 1499 aa9.29□□□□□ -0.92
TM9SF4-205ENST00000450829 CEP162Q5TB80 1403 aa9.29□□□□□ -0.92
TM9SF4-205ENST00000450829 CTTNBP2Q8WZ74 1663 aa9.29□□□□□ -0.92
TM9SF4-205ENST00000450829 TRHP20396 242 aaPredicted RBP9.27□□□□□ -0.93
TM9SF4-205ENST00000450829 KIF13AQ9H1H9 1805 aa9.26□□□□□ -0.93
TM9SF4-205ENST00000450829 EHMT2Q96KQ7 1210 aa9.25□□□□□ -0.93
TM9SF4-205ENST00000450829 PRG4Q92954 1404 aaPredicted RBP9.21□□□□□ -0.94
TM9SF4-205ENST00000450829 ADCY10Q96PN6 1610 aa9.2□□□□□ -0.94
TM9SF4-205ENST00000450829 IGF1RP08069 1367 aa9.18□□□□□ -0.94
TM9SF4-205ENST00000450829 CLIP1P30622 1438 aa9.18□□□□□ -0.94
TM9SF4-205ENST00000450829 UBTFP17480 764 aaKnown RBP9.17□□□□□ -0.94
TM9SF4-205ENST00000450829 DIP2BQ9P265 1576 aa9.16□□□□□ -0.94
TM9SF4-205ENST00000450829 MAPKBP1O60336 1514 aa9.16□□□□□ -0.94
TM9SF4-205ENST00000450829 KIAA0586Q9BVV6 1533 aa9.16□□□□□ -0.94
TM9SF4-205ENST00000450829 CARMIL1Q5VZK9 1371 aa9.15□□□□□ -0.94
TM9SF4-205ENST00000450829 VPS8Q8N3P4 1428 aa9.14□□□□□ -0.95
TM9SF4-205ENST00000450829 JPH4Q96JJ6 628 aa9.14□□□□□ -0.95
TM9SF4-205ENST00000450829 IQGAP2Q13576 1575 aa9.12□□□□□ -0.95
TM9SF4-205ENST00000450829 EFCAB5A4FU69 1503 aa9.12□□□□□ -0.95
TM9SF4-205ENST00000450829 ABCC10Q5T3U5 1492 aa9.12□□□□□ -0.95
TM9SF4-205ENST00000450829 ARHGAP35Q9NRY4 1499 aa9.11□□□□□ -0.95
TM9SF4-205ENST00000450829 SAMD9Q5K651 1589 aa9.11□□□□□ -0.95
TM9SF4-205ENST00000450829 TSPOAP1O95153 1857 aa9.11□□□□□ -0.95
TM9SF4-205ENST00000450829 CFAP43Q8NDM7 1665 aa9.1□□□□□ -0.95
TM9SF4-205ENST00000450829 PPRC1Q5VV67 1664 aaKnown RBP9.08□□□□□ -0.96
TM9SF4-205ENST00000450829 PCF11O94913 1555 aaKnown RBP9.07□□□□□ -0.96
TM9SF4-205ENST00000450829 DISP1Q96F81 1524 aa9.07□□□□□ -0.96
TM9SF4-205ENST00000450829 TRIM26Q12899 539 aaPredicted RBP9.06□□□□□ -0.96
TM9SF4-205ENST00000450829 ABCC2Q92887 1545 aa9.05□□□□□ -0.96
TM9SF4-205ENST00000450829 UGGT2Q9NYU1 1516 aa9.05□□□□□ -0.96
TM9SF4-205ENST00000450829 KDM6BO15054 1643 aa9.05□□□□□ -0.96
TM9SF4-205ENST00000450829 KIAA0556O60303 1618 aa9.05□□□□□ -0.96
TM9SF4-205ENST00000450829 LRRIQ1Q96JM4 1722 aa9.05□□□□□ -0.96
TM9SF4-205ENST00000450829 PCGF6Q9BYE7 350 aa9.04□□□□□ -0.96
TM9SF4-205ENST00000450829 PTPRGP23470 1445 aa9.04□□□□□ -0.96
TM9SF4-205ENST00000450829 UHRF1BP1LA0JNW5 1464 aa9.03□□□□□ -0.96
TM9SF4-205ENST00000450829 ZCCHC11Q5TAX3 1644 aaKnown RBP9.03□□□□□ -0.96
TM9SF4-205ENST00000450829 CARMIL2Q6F5E8 1435 aa9.03□□□□□ -0.96
TM9SF4-205ENST00000450829 GLI2P10070 1586 aa9.03□□□□□ -0.96
TM9SF4-205ENST00000450829 TIAM1Q13009 1591 aa9.03□□□□□ -0.96
TM9SF4-205ENST00000450829 FAM69CQ0P6D2 419 aa9.02□□□□□ -0.97
TM9SF4-205ENST00000450829 MAP3K1Q13233 1512 aa9.01□□□□□ -0.97
TM9SF4-205ENST00000450829 MAP3K4Q9Y6R4 1608 aa9.01□□□□□ -0.97
TM9SF4-205ENST00000450829 KDM5BQ9UGL1 1544 aa9□□□□□ -0.97
TM9SF4-205ENST00000450829 ASXL2Q76L83 1435 aa9□□□□□ -0.97
TM9SF4-205ENST00000450829 FYCO1Q9BQS8 1478 aa9□□□□□ -0.97
TM9SF4-205ENST00000450829 UACAQ9BZF9 1416 aa8.99□□□□□ -0.97
TM9SF4-205ENST00000450829 NPM1P06748 294 aaKnown RBP eCLIP8.99□□□□□ -0.97
TM9SF4-205ENST00000450829 PLB1Q6P1J6 1458 aa8.99□□□□□ -0.97
TM9SF4-205ENST00000450829 FHOD3Q2V2M9 1422 aa8.98□□□□□ -0.97
TM9SF4-205ENST00000450829 RANGAP1P46060 587 aaPredicted RBP8.98□□□□□ -0.97
TM9SF4-205ENST00000450829 PIAS4Q8N2W9 510 aaPredicted RBP8.98□□□□□ -0.97
TM9SF4-205ENST00000450829 ABCA8O94911 1581 aa8.97□□□□□ -0.97
TM9SF4-205ENST00000450829 EPRSP07814 1512 aaKnown RBP8.96□□□□□ -0.97
TM9SF4-205ENST00000450829 HECW1Q76N89 1606 aa8.96□□□□□ -0.98
TM9SF4-205ENST00000450829 TTBK1Q5TCY1 1321 aaPredicted RBP8.96□□□□□ -0.98
TM9SF4-205ENST00000450829 PPARGC1BQ86YN6 1023 aaKnown RBP8.95□□□□□ -0.98
TM9SF4-205ENST00000450829 FMN1Q68DA7 1419 aa8.94□□□□□ -0.98
TM9SF4-205ENST00000450829 CASKIN1Q8WXD9 1431 aa8.94□□□□□ -0.98
TM9SF4-205ENST00000450829 COL17A1Q9UMD9 1497 aaPredicted RBP8.93□□□□□ -0.98
TM9SF4-205ENST00000450829 WDR7Q9Y4E6 1490 aa8.93□□□□□ -0.98
TM9SF4-205ENST00000450829 LRRC9Q6ZRR7 1453 aa8.91□□□□□ -0.98
TM9SF4-205ENST00000450829 APLP2Q06481 763 aa8.91□□□□□ -0.98
TM9SF4-205ENST00000450829 RAPGEF6Q8TEU7 1601 aa8.91□□□□□ -0.98
TM9SF4-205ENST00000450829 SUPT6HQ7KZ85 1726 aaKnown RBP8.9□□□□□ -0.98
TM9SF4-205ENST00000450829 EHBP1L1Q8N3D4 1523 aa8.9□□□□□ -0.99
TM9SF4-205ENST00000450829 TEX14Q8IWB6 1497 aa8.89□□□□□ -0.99
TM9SF4-205ENST00000450829 KDM4FA0A1W2PPD8 638 aa8.89□□□□□ -0.99
TM9SF4-205ENST00000450829 MYT1Q01538 1121 aa8.89□□□□□ -0.99
TM9SF4-205ENST00000450829 CCDC18Q5T9S5 1454 aa8.89□□□□□ -0.99
TM9SF4-205ENST00000450829 RRBP1Q9P2E9 1410 aaKnown RBP8.88□□□□□ -0.99
TM9SF4-205ENST00000450829 HRCP23327 699 aa8.88□□□□□ -0.99
TM9SF4-205ENST00000450829 ADGRL1O94910 1474 aa8.88□□□□□ -0.99
TM9SF4-205ENST00000450829 MAGI3Q5TCQ9 1506 aa8.87□□□□□ -0.99
TM9SF4-205ENST00000450829 ABCA9Q8IUA7 1624 aa8.85□□□□□ -0.99
TM9SF4-205ENST00000450829 KANK4Q5T7N3 995 aaPredicted RBP8.85□□□□□ -0.99
TM9SF4-205ENST00000450829 P3H3Q8IVL6 736 aa8.85□□□□□ -0.99
TM9SF4-205ENST00000450829 ATP10BO94823 1461 aa8.83□□□□□ -1
TM9SF4-205ENST00000450829 CD109Q6YHK3 1445 aa8.83□□□□□ -1
TM9SF4-205ENST00000450829 CACNB1Q02641 598 aaPredicted RBP8.83□□□□□ -1
TM9SF4-205ENST00000450829 CDK13Q14004 1512 aaKnown RBP8.83□□□□□ -1
TM9SF4-205ENST00000450829 NUP153P49790 1475 aaKnown RBP8.82□□□□□ -1
TM9SF4-205ENST00000450829 FRMPD1Q5SYB0 1578 aa8.82□□□□□ -1
TM9SF4-205ENST00000450829 ITSN2Q9NZM3 1697 aa8.81□□□□□ -1
TM9SF4-205ENST00000450829 PELP1Q8IZL8 1130 aaKnown RBP8.81□□□□□ -1
TM9SF4-205ENST00000450829 ARAP3Q8WWN8 1544 aa8.8□□□□□ -1
TM9SF4-205ENST00000450829 PHLDB1Q86UU1 1377 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms