RNA–Protein interactions for RNA: ENST00000450536.6

REPS1-208, Transcript of RALBP1 associated Eps domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene REPS1, Length 4,537 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPS1-208ENST00000450536 TSPY10P0CW01 314 aa22.64■■□□□ 1.22
REPS1-208ENST00000450536 NPM1P06748 294 aaKnown RBP eCLIP22.62■■□□□ 1.21
REPS1-208ENST00000450536 CHIC2Q9UKJ5 165 aa22.6■■□□□ 1.21
REPS1-208ENST00000450536 EIF4G1Q04637 1599 aaKnown RBP22.59■■□□□ 1.21
REPS1-208ENST00000450536 PLEKHD1A6NEE1 506 aa22.59■■□□□ 1.21
REPS1-208ENST00000450536 CCNB3Q8WWL7 1395 aa22.59■■□□□ 1.21
REPS1-208ENST00000450536 RAPGEF2Q9Y4G8 1499 aa22.57■■□□□ 1.2
REPS1-208ENST00000450536 NPM2Q86SE8 214 aaKnown RBP22.55■■□□□ 1.2
REPS1-208ENST00000450536 FAM9BQ8IZU0 186 aa22.55■■□□□ 1.2
REPS1-208ENST00000450536 FANCD2Q9BXW9 1451 aa22.53■■□□□ 1.2
REPS1-208ENST00000450536 FMN1Q68DA7 1419 aa22.51■■□□□ 1.19
REPS1-208ENST00000450536 HIRIP3Q9BW71 556 aaPredicted RBP22.48■■□□□ 1.19
REPS1-208ENST00000450536 TDRD9Q8NDG6 1382 aaKnown RBP22.46■■□□□ 1.19
REPS1-208ENST00000450536 HMGXB3Q12766 1538 aa22.46■■□□□ 1.19
REPS1-208ENST00000450536 RUSC2Q8N2Y8 1516 aa22.44■■□□□ 1.18
REPS1-208ENST00000450536 CFDP1Q9UEE9 299 aaPredicted RBP22.44■■□□□ 1.18
REPS1-208ENST00000450536 IRX6P78412 446 aaPredicted RBP22.43■■□□□ 1.18
REPS1-208ENST00000450536 RRP7BPQ9NSQ0 103 aa22.42■■□□□ 1.18
REPS1-208ENST00000450536 ANP32EQ9BTT0 268 aa22.4■■□□□ 1.18
REPS1-208ENST00000450536 ARHGAP35Q9NRY4 1499 aa22.4■■□□□ 1.18
REPS1-208ENST00000450536 CCDC136Q96JN2 1154 aa22.39■■□□□ 1.18
REPS1-208ENST00000450536 NBR1Q14596 966 aa22.38■■□□□ 1.17
REPS1-208ENST00000450536 MRS2Q9HD23 443 aa22.38■■□□□ 1.17
REPS1-208ENST00000450536 CANXP27824 592 aaKnown RBP22.37■■□□□ 1.17
REPS1-208ENST00000450536 CFTRP13569 1480 aa22.37■■□□□ 1.17
REPS1-208ENST00000450536 BICRAQ9NZM4 1560 aa22.37■■□□□ 1.17
REPS1-208ENST00000450536 CARMIL2Q6F5E8 1435 aa22.36■■□□□ 1.17
REPS1-208ENST00000450536 TIMELESSQ9UNS1 1208 aa22.36■■□□□ 1.17
REPS1-208ENST00000450536 KANK4Q5T7N3 995 aaPredicted RBP22.33■■□□□ 1.16
REPS1-208ENST00000450536 SUPT16HQ9Y5B9 1047 aaKnown RBP22.33■■□□□ 1.16
REPS1-208ENST00000450536 FGD5Q6ZNL6 1462 aa22.32■■□□□ 1.16
REPS1-208ENST00000450536 ZBTB47Q9UFB7 747 aaPredicted RBP22.32■■□□□ 1.16
REPS1-208ENST00000450536 SETD5Q9C0A6 1442 aa22.29■■□□□ 1.16
REPS1-208ENST00000450536 EIF4G2P78344 907 aaKnown RBP eCLIP22.29■■□□□ 1.16
REPS1-208ENST00000450536 SALL2Q9Y467 1007 aaPredicted RBP22.28■■□□□ 1.16
REPS1-208ENST00000450536 TMC1Q8TDI8 760 aa22.28■■□□□ 1.16
REPS1-208ENST00000450536 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.27■■□□□ 1.162e-6■■■■□ 22.7
REPS1-208ENST00000450536 KIF21BO75037 1637 aa22.27■■□□□ 1.16
REPS1-208ENST00000450536 IGF1RP08069 1367 aa22.27■■□□□ 1.15
REPS1-208ENST00000450536 EIF5BO60841 1220 aaKnown RBP22.25■■□□□ 1.15
REPS1-208ENST00000450536 PEG3Q9GZU2 1588 aa22.23■■□□□ 1.15
REPS1-208ENST00000450536 ERICH3Q5RHP9 1530 aa22.22■■□□□ 1.15
REPS1-208ENST00000450536 KCNH8Q96L42 1107 aa22.22■■□□□ 1.15
REPS1-208ENST00000450536 SYNJ1O43426 1573 aa22.21■■□□□ 1.15
REPS1-208ENST00000450536 FHOD3Q2V2M9 1422 aa22.21■■□□□ 1.15
REPS1-208ENST00000450536 ESF1Q9H501 851 aaKnown RBP22.2■■□□□ 1.14
REPS1-208ENST00000450536 TOP2BQ02880 1626 aa22.19■■□□□ 1.14
REPS1-208ENST00000450536 GAPVD1Q14C86 1478 aa22.16■■□□□ 1.14
REPS1-208ENST00000450536 CHGAP10645 457 aaKnown RBP22.14■■□□□ 1.13
REPS1-208ENST00000450536 BCL11AQ9H165 835 aa22.12■■□□□ 1.13
REPS1-208ENST00000450536 CC2D2AQ9P2K1 1620 aa22.11■■□□□ 1.13
REPS1-208ENST00000450536 SIN3AQ96ST3 1273 aa22.1■■□□□ 1.13
REPS1-208ENST00000450536 KDM2AQ9Y2K7 1162 aa22.1■■□□□ 1.13
REPS1-208ENST00000450536 RAB3GAP2Q9H2M9 1393 aa22.1■■□□□ 1.13
REPS1-208ENST00000450536 CCDC18Q5T9S5 1454 aa22.09■■□□□ 1.13
REPS1-208ENST00000450536 RAD54L2Q9Y4B4 1467 aa22.08■■□□□ 1.12
REPS1-208ENST00000450536 STAG3Q9UJ98 1225 aa22.07■■□□□ 1.12
REPS1-208ENST00000450536 UNC13AQ9UPW8 1703 aa22.05■■□□□ 1.12
REPS1-208ENST00000450536 PRXQ9BXM0 1461 aa22.05■■□□□ 1.12
REPS1-208ENST00000450536 NEFMP07197 916 aa22.05■■□□□ 1.12
REPS1-208ENST00000450536 UPF2Q9HAU5 1272 aaKnown RBP22.04■■□□□ 1.12
REPS1-208ENST00000450536 CUX1P39880 1505 aa22.02■■□□□ 1.12
REPS1-208ENST00000450536 JPH4Q96JJ6 628 aa22■■□□□ 1.11
REPS1-208ENST00000450536 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.99■■□□□ 1.11
REPS1-208ENST00000450536 PPP4R2Q9NY27 417 aa21.99■■□□□ 1.11
REPS1-208ENST00000450536 ANKRD30AQ9BXX3 1397 aa21.96■■□□□ 1.11
REPS1-208ENST00000450536 TOPBP1Q92547 1522 aa21.95■■□□□ 1.1
REPS1-208ENST00000450536 SENP3-EIF4A1A0A087X0R7 540 aa21.95■■□□□ 1.1
REPS1-208ENST00000450536 RSPH4AQ5TD94 716 aa21.94■■□□□ 1.1
REPS1-208ENST00000450536 CDCA8Q53HL2 280 aa21.94■■□□□ 1.1
REPS1-208ENST00000450536 RBM19Q9Y4C8 960 aaKnown RBP21.94■■□□□ 1.1
REPS1-208ENST00000450536 HSP90AA1P07900 732 aaKnown RBP21.93■■□□□ 1.1
REPS1-208ENST00000450536 WDR43Q15061 677 aaKnown RBP eCLIP21.93■■□□□ 1.1
REPS1-208ENST00000450536 DNMBPQ6XZF7 1577 aa21.93■■□□□ 1.1
REPS1-208ENST00000450536 GRIN2BQ13224 1484 aa21.91■■□□□ 1.1
REPS1-208ENST00000450536 CARD11Q9BXL7 1154 aa21.91■■□□□ 1.1
REPS1-208ENST00000450536 RGL3Q3MIN7 710 aa21.89■■□□□ 1.1
REPS1-208ENST00000450536 ANP32BQ92688 251 aaKnown RBP21.89■■□□□ 1.09
REPS1-208ENST00000450536 EFCAB5A4FU69 1503 aa21.89■■□□□ 1.09
REPS1-208ENST00000450536 CASKIN1Q8WXD9 1431 aa21.89■■□□□ 1.09
REPS1-208ENST00000450536 MRC2Q9UBG0 1479 aa21.89■■□□□ 1.09
REPS1-208ENST00000450536 CCER2I3L3R5 266 aa21.88■■□□□ 1.09
REPS1-208ENST00000450536 EFCAB2Q5VUJ9 269 aa21.88■■□□□ 1.09
REPS1-208ENST00000450536 POLA1P09884 1462 aaPredicted RBP21.88■■□□□ 1.09
REPS1-208ENST00000450536 KANK1Q14678 1352 aa21.88■■□□□ 1.09
REPS1-208ENST00000450536 TSHZ2Q9NRE2 1034 aa21.88■■□□□ 1.09
REPS1-208ENST00000450536 B4GALNT3Q6L9W6 998 aa21.87■■□□□ 1.09
REPS1-208ENST00000450536 NESP48681 1621 aa21.87■■□□□ 1.09
REPS1-208ENST00000450536 DHX57Q6P158 1386 aaKnown RBP21.87■■□□□ 1.09
REPS1-208ENST00000450536 ARXQ96QS3 562 aa21.87■■□□□ 1.09
REPS1-208ENST00000450536 SLC24A1O60721 1099 aa21.86■■□□□ 1.09
REPS1-208ENST00000450536 MPHOSPH9Q99550 1183 aa21.86■■□□□ 1.09
REPS1-208ENST00000450536 LAMC3Q9Y6N6 1575 aa21.86■■□□□ 1.09
REPS1-208ENST00000450536 ARAP1Q96P48 1450 aa21.85■■□□□ 1.09
REPS1-208ENST00000450536 DDRGK1Q96HY6 314 aa21.84■■□□□ 1.09
REPS1-208ENST00000450536 NOP58Q9Y2X3 529 aaKnown RBP21.84■■□□□ 1.09
REPS1-208ENST00000450536 LRRC9Q6ZRR7 1453 aa21.84■■□□□ 1.09
REPS1-208ENST00000450536 FYCO1Q9BQS8 1478 aa21.83■■□□□ 1.09
REPS1-208ENST00000450536 IFT140Q96RY7 1462 aa21.83■■□□□ 1.08
REPS1-208ENST00000450536 AQRO60306 1485 aaKnown RBP eCLIP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 401.7 ms