RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 POLA1P09884 1462 aaPredicted RBP32.52■■■□□ 2.8
TTC3-210ENST00000450533 MAP3K1Q13233 1512 aa32.49■■■□□ 2.79
TTC3-210ENST00000450533 ATP1B4Q9UN42 357 aaPredicted RBP32.49■■■□□ 2.79
TTC3-210ENST00000450533 LRRC9Q6ZRR7 1453 aa32.48■■■□□ 2.79
TTC3-210ENST00000450533 ABCA10Q8WWZ4 1543 aa32.47■■■□□ 2.79
TTC3-210ENST00000450533 FHAD1B1AJZ9 1412 aa32.44■■■□□ 2.78
TTC3-210ENST00000450533 PHLDB1Q86UU1 1377 aa32.43■■■□□ 2.78
TTC3-210ENST00000450533 PCF11O94913 1555 aaKnown RBP32.42■■■□□ 2.78
TTC3-210ENST00000450533 RAB3GAP2Q9H2M9 1393 aa32.42■■■□□ 2.78
TTC3-210ENST00000450533 FHOD3Q2V2M9 1422 aa32.41■■■□□ 2.78
TTC3-210ENST00000450533 FAM50AQ14320 339 aaKnown RBP32.36■■■□□ 2.77
TTC3-210ENST00000450533 PELP1Q8IZL8 1130 aaKnown RBP32.33■■■□□ 2.77
TTC3-210ENST00000450533 CFAP43Q8NDM7 1665 aa32.32■■■□□ 2.76
TTC3-210ENST00000450533 URB2Q14146 1524 aaKnown RBP32.29■■■□□ 2.76
TTC3-210ENST00000450533 CUL7Q14999 1698 aa32.28■■■□□ 2.76
TTC3-210ENST00000450533 SETD5Q9C0A6 1442 aa32.26■■■□□ 2.76
TTC3-210ENST00000450533 MAPKBP1O60336 1514 aa32.24■■■□□ 2.75
TTC3-210ENST00000450533 EFCAB5A4FU69 1503 aa32.24■■■□□ 2.75
TTC3-210ENST00000450533 TDRD9Q8NDG6 1382 aaKnown RBP32.22■■■□□ 2.75
TTC3-210ENST00000450533 LAMC3Q9Y6N6 1575 aa32.22■■■□□ 2.75
TTC3-210ENST00000450533 FYCO1Q9BQS8 1478 aa32.22■■■□□ 2.75
TTC3-210ENST00000450533 CTTNBP2Q8WZ74 1663 aa32.22■■■□□ 2.75
TTC3-210ENST00000450533 CASKIN1Q8WXD9 1431 aa32.2■■■□□ 2.75
TTC3-210ENST00000450533 DNAJC5BQ9UF47 199 aa32.2■■■□□ 2.74
TTC3-210ENST00000450533 WDR97A6NE52 1622 aa32.17■■■□□ 2.74
TTC3-210ENST00000450533 AQRO60306 1485 aaKnown RBP eCLIP32.12■■■□□ 2.732e-7■■□□□ 13.9
TTC3-210ENST00000450533 FMN1Q68DA7 1419 aa32.09■■■□□ 2.73
TTC3-210ENST00000450533 SIN3AQ96ST3 1273 aa32.08■■■□□ 2.73
TTC3-210ENST00000450533 GAPVD1Q14C86 1478 aa32.08■■■□□ 2.73
TTC3-210ENST00000450533 ABCA5Q8WWZ7 1642 aa32.08■■■□□ 2.73
TTC3-210ENST00000450533 PDS5BQ9NTI5 1447 aa32.06■■■□□ 2.72
TTC3-210ENST00000450533 SNAPC4Q5SXM2 1469 aa32.04■■■□□ 2.72
TTC3-210ENST00000450533 MTUS2Q5JR59 1369 aa31.99■■■□□ 2.71
TTC3-210ENST00000450533 KIF21AQ7Z4S6 1674 aa31.97■■■□□ 2.71
TTC3-210ENST00000450533 FGD6Q6ZV73 1430 aa31.97■■■□□ 2.71
TTC3-210ENST00000450533 SAMD9Q5K651 1589 aa31.95■■■□□ 2.71
TTC3-210ENST00000450533 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.94■■■□□ 2.73e-9■■■■□ 21.4
TTC3-210ENST00000450533 LRRIQ1Q96JM4 1722 aa31.9■■■□□ 2.7
TTC3-210ENST00000450533 GRIN2BQ13224 1484 aa31.86■■■□□ 2.69
TTC3-210ENST00000450533 TARBP1Q13395 1621 aaKnown RBP31.84■■■□□ 2.69
TTC3-210ENST00000450533 PTPRKQ15262 1439 aa31.83■■■□□ 2.69
TTC3-210ENST00000450533 NCOA2Q15596 1464 aa31.82■■■□□ 2.68
TTC3-210ENST00000450533 CCDC18Q5T9S5 1454 aa31.77■■■□□ 2.68
TTC3-210ENST00000450533 MYOM3Q5VTT5 1437 aa31.76■■■□□ 2.67
TTC3-210ENST00000450533 KCNH8Q96L42 1107 aa31.74■■■□□ 2.67
TTC3-210ENST00000450533 TIMELESSQ9UNS1 1208 aa31.74■■■□□ 2.67
TTC3-210ENST00000450533 DDX10Q13206 875 aaKnown RBP31.73■■■□□ 2.67
TTC3-210ENST00000450533 HIRIP3Q9BW71 556 aaPredicted RBP31.73■■■□□ 2.67
TTC3-210ENST00000450533 PPP1R15AO75807 674 aaPredicted RBP31.72■■■□□ 2.67
TTC3-210ENST00000450533 HFM1A2PYH4 1435 aa31.72■■■□□ 2.67
TTC3-210ENST00000450533 THOC2Q8NI27 1593 aaKnown RBP31.72■■■□□ 2.67
TTC3-210ENST00000450533 SUPT6HQ7KZ85 1726 aaKnown RBP31.71■■■□□ 2.67
TTC3-210ENST00000450533 EHBP1L1Q8N3D4 1523 aa31.7■■■□□ 2.67
TTC3-210ENST00000450533 PBRM1Q86U86 1689 aa31.69■■■□□ 2.66
TTC3-210ENST00000450533 MAGI3Q5TCQ9 1506 aa31.69■■■□□ 2.66
TTC3-210ENST00000450533 PTPN23Q9H3S7 1636 aa31.68■■■□□ 2.66
TTC3-210ENST00000450533 NAIPQ13075 1403 aa31.65■■■□□ 2.66
TTC3-210ENST00000450533 UACAQ9BZF9 1416 aa31.64■■■□□ 2.66
TTC3-210ENST00000450533 UGGT2Q9NYU1 1516 aa31.63■■■□□ 2.65
TTC3-210ENST00000450533 TONSLQ96HA7 1378 aa31.62■■■□□ 2.65
TTC3-210ENST00000450533 ARID3CA6NKF2 412 aa31.62■■■□□ 2.65
TTC3-210ENST00000450533 IQGAP2Q13576 1575 aa31.61■■■□□ 2.65
TTC3-210ENST00000450533 ADAMTS12P58397 1594 aa31.59■■■□□ 2.65
TTC3-210ENST00000450533 CHIC2Q9UKJ5 165 aa31.58■■■□□ 2.65
TTC3-210ENST00000450533 ARHGEF11O15085 1522 aa31.57■■■□□ 2.64
TTC3-210ENST00000450533 MRC2Q9UBG0 1479 aa31.57■■■□□ 2.64
TTC3-210ENST00000450533 RRP7BPQ9NSQ0 103 aa31.56■■■□□ 2.64
TTC3-210ENST00000450533 HECW1Q76N89 1606 aa31.55■■■□□ 2.64
TTC3-210ENST00000450533 EPRSP07814 1512 aaKnown RBP31.53■■■□□ 2.64
TTC3-210ENST00000450533 CDK13Q14004 1512 aaKnown RBP31.53■■■□□ 2.64
TTC3-210ENST00000450533 SUPT16HQ9Y5B9 1047 aaKnown RBP31.51■■■□□ 2.63
TTC3-210ENST00000450533 ZNF608Q9ULD9 1512 aaPredicted RBP31.48■■■□□ 2.63
TTC3-210ENST00000450533 TCOF1Q13428 1488 aaKnown RBP31.45■■■□□ 2.62
TTC3-210ENST00000450533 WDR62O43379 1518 aa31.43■■■□□ 2.62
TTC3-210ENST00000450533 TRIM52Q96A61 297 aa31.41■■■□□ 2.62
TTC3-210ENST00000450533 IFT140Q96RY7 1462 aa31.37■■■□□ 2.61
TTC3-210ENST00000450533 KDM6BO15054 1643 aa31.36■■■□□ 2.61
TTC3-210ENST00000450533 GCC2Q8IWJ2 1684 aa31.34■■■□□ 2.61
TTC3-210ENST00000450533 ANP32CO43423 234 aa31.34■■■□□ 2.61
TTC3-210ENST00000450533 KDM5BQ9UGL1 1544 aa31.33■■■□□ 2.61
TTC3-210ENST00000450533 MIA2Q96PC5 1412 aa31.32■■■□□ 2.61
TTC3-210ENST00000450533 DENND4BO75064 1496 aaPredicted RBP31.32■■■□□ 2.6
TTC3-210ENST00000450533 DISP1Q96F81 1524 aa31.29■■■□□ 2.6
TTC3-210ENST00000450533 KIAA0586Q9BVV6 1533 aa31.28■■■□□ 2.6
TTC3-210ENST00000450533 KIAA0556O60303 1618 aa31.26■■■□□ 2.6
TTC3-210ENST00000450533 AKNAQ7Z591 1439 aa31.26■■■□□ 2.6
TTC3-210ENST00000450533 CCER2I3L3R5 266 aa31.24■■■□□ 2.59
TTC3-210ENST00000450533 FOXD1Q16676 465 aa31.24■■■□□ 2.59
TTC3-210ENST00000450533 MPHOSPH9Q99550 1183 aa31.24■■■□□ 2.59
TTC3-210ENST00000450533 NUP153P49790 1475 aaKnown RBP31.22■■■□□ 2.59
TTC3-210ENST00000450533 ZNF644Q9H582 1327 aaPredicted RBP31.22■■■□□ 2.59
TTC3-210ENST00000450533 GRIN2AQ12879 1464 aa31.21■■■□□ 2.59
TTC3-210ENST00000450533 EIF4G3O43432 1585 aaKnown RBP31.2■■■□□ 2.58
TTC3-210ENST00000450533 DAPK1P53355 1430 aa31.17■■■□□ 2.58
TTC3-210ENST00000450533 RAPGEF6Q8TEU7 1601 aa31.15■■■□□ 2.58
TTC3-210ENST00000450533 HSPA5P11021 654 aaKnown RBP31.14■■■□□ 2.58
TTC3-210ENST00000450533 ABCC5O15440 1437 aa31.13■■■□□ 2.57
TTC3-210ENST00000450533 L3MBTL2Q969R5 705 aa31.11■■■□□ 2.57
TTC3-210ENST00000450533 CDK11AQ9UQ88 783 aaPredicted RBP31.1■■■□□ 2.57
TTC3-210ENST00000450533 ERCC6Q03468 1493 aa31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms