RNA–Protein interactions for RNA: ENST00000450501.5

COPS7B-215, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-215ENST00000450501 SHROOM2Q13796 1616 aa31.39■■■□□ 2.62
COPS7B-215ENST00000450501 KIAA0586Q9BVV6 1533 aa31.37■■■□□ 2.61
COPS7B-215ENST00000450501 CSRNP3Q8WYN3 585 aa31.35■■■□□ 2.61
COPS7B-215ENST00000450501 PRXQ9BXM0 1461 aa31.34■■■□□ 2.61
COPS7B-215ENST00000450501 JPH4Q96JJ6 628 aa31.32■■■□□ 2.6
COPS7B-215ENST00000450501 ARAP1Q96P48 1450 aa31.32■■■□□ 2.6
COPS7B-215ENST00000450501 CYB5RLQ6IPT4 315 aa31.27■■■□□ 2.6
COPS7B-215ENST00000450501 FAM9AQ8IZU1 332 aaPredicted RBP31.25■■■□□ 2.59
COPS7B-215ENST00000450501 PRG4Q92954 1404 aaPredicted RBP31.24■■■□□ 2.59
COPS7B-215ENST00000450501 ERCC6L2Q5T890 1561 aa31.24■■■□□ 2.59
COPS7B-215ENST00000450501 IQGAP2Q13576 1575 aa31.22■■■□□ 2.59
COPS7B-215ENST00000450501 CTTNBP2Q8WZ74 1663 aa31.16■■■□□ 2.58
COPS7B-215ENST00000450501 KIF21BO75037 1637 aa31.09■■■□□ 2.57
COPS7B-215ENST00000450501 CARMIL2Q6F5E8 1435 aa31.06■■■□□ 2.56
COPS7B-215ENST00000450501 UGGT2Q9NYU1 1516 aa31.04■■■□□ 2.56
COPS7B-215ENST00000450501 DISP1Q96F81 1524 aa30.96■■■□□ 2.55
COPS7B-215ENST00000450501 TNIKQ9UKE5 1360 aa30.92■■■□□ 2.54
COPS7B-215ENST00000450501 KIAA0556O60303 1618 aa30.91■■■□□ 2.54
COPS7B-215ENST00000450501 GOLGA3Q08378 1498 aa30.91■■■□□ 2.54
COPS7B-215ENST00000450501 PTPRGP23470 1445 aa30.9■■■□□ 2.54
COPS7B-215ENST00000450501 UBTFP17480 764 aaKnown RBP30.82■■■□□ 2.52
COPS7B-215ENST00000450501 EHMT2Q96KQ7 1210 aa30.82■■■□□ 2.52
COPS7B-215ENST00000450501 TTBK1Q5TCY1 1321 aaPredicted RBP30.81■■■□□ 2.52
COPS7B-215ENST00000450501 ADCY10Q96PN6 1610 aa30.76■■■□□ 2.51
COPS7B-215ENST00000450501 SAMD9Q5K651 1589 aa30.74■■■□□ 2.51
COPS7B-215ENST00000450501 NPM1P06748 294 aaKnown RBP eCLIP30.7■■■□□ 2.51
COPS7B-215ENST00000450501 RANGAP1P46060 587 aaPredicted RBP30.69■■■□□ 2.5
COPS7B-215ENST00000450501 UACAQ9BZF9 1416 aa30.69■■■□□ 2.5
COPS7B-215ENST00000450501 P3H3Q8IVL6 736 aa30.67■■■□□ 2.5
COPS7B-215ENST00000450501 UHRF1BP1LA0JNW5 1464 aa30.66■■■□□ 2.5
COPS7B-215ENST00000450501 EFCAB5A4FU69 1503 aa30.65■■■□□ 2.5
COPS7B-215ENST00000450501 ABCC2Q92887 1545 aa30.64■■■□□ 2.5
COPS7B-215ENST00000450501 TRHP20396 242 aaPredicted RBP30.62■■■□□ 2.49
COPS7B-215ENST00000450501 PLB1Q6P1J6 1458 aa30.57■■■□□ 2.48
COPS7B-215ENST00000450501 ABCA8O94911 1581 aa30.56■■■□□ 2.48
COPS7B-215ENST00000450501 MAPKBP1O60336 1514 aa30.55■■■□□ 2.48
COPS7B-215ENST00000450501 FHOD3Q2V2M9 1422 aa30.55■■■□□ 2.48
COPS7B-215ENST00000450501 KDM5BQ9UGL1 1544 aa30.51■■■□□ 2.47
COPS7B-215ENST00000450501 ARHGAP35Q9NRY4 1499 aa30.47■■■□□ 2.47
COPS7B-215ENST00000450501 ZCCHC11Q5TAX3 1644 aaKnown RBP30.46■■■□□ 2.47
COPS7B-215ENST00000450501 RAPGEF6Q8TEU7 1601 aa30.44■■■□□ 2.46
COPS7B-215ENST00000450501 ASXL2Q76L83 1435 aa30.39■■■□□ 2.46
COPS7B-215ENST00000450501 ABCC10Q5T3U5 1492 aa30.39■■■□□ 2.46
COPS7B-215ENST00000450501 KIF13AQ9H1H9 1805 aa30.38■■■□□ 2.45
COPS7B-215ENST00000450501 FMN1Q68DA7 1419 aa30.37■■■□□ 2.45
COPS7B-215ENST00000450501 CLIP1P30622 1438 aa30.35■■■□□ 2.45
COPS7B-215ENST00000450501 DIP2BQ9P265 1576 aa30.34■■■□□ 2.45
COPS7B-215ENST00000450501 FAM69CQ0P6D2 419 aa30.32■■■□□ 2.44
COPS7B-215ENST00000450501 LOC105371045A0A1W2PR82 267 aa30.31■■■□□ 2.44
COPS7B-215ENST00000450501 ATP10BO94823 1461 aa30.31■■■□□ 2.44
COPS7B-215ENST00000450501 NUP153P49790 1475 aaKnown RBP30.31■■■□□ 2.44
COPS7B-215ENST00000450501 ARID3CA6NKF2 412 aa30.28■■■□□ 2.44
COPS7B-215ENST00000450501 SENP3Q9H4L4 574 aaPredicted RBP30.27■■■□□ 2.44
COPS7B-215ENST00000450501 WDR7Q9Y4E6 1490 aa30.26■■■□□ 2.44
COPS7B-215ENST00000450501 CEP162Q5TB80 1403 aa30.23■■■□□ 2.43
COPS7B-215ENST00000450501 HECW1Q76N89 1606 aa30.22■■■□□ 2.43
COPS7B-215ENST00000450501 EPRSP07814 1512 aaKnown RBP30.22■■■□□ 2.43
COPS7B-215ENST00000450501 GLI2P10070 1586 aa30.21■■■□□ 2.43
COPS7B-215ENST00000450501 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.21■■■□□ 2.43
COPS7B-215ENST00000450501 HNRNPUL2Q1KMD3 747 aaKnown RBP30.21■■■□□ 2.43
COPS7B-215ENST00000450501 ATP1B4Q9UN42 357 aaPredicted RBP30.16■■■□□ 2.42
COPS7B-215ENST00000450501 KCNH8Q96L42 1107 aa30.12■■■□□ 2.41
COPS7B-215ENST00000450501 TSPOAP1O95153 1857 aa30.12■■■□□ 2.41
COPS7B-215ENST00000450501 CASKIN1Q8WXD9 1431 aa30.12■■■□□ 2.41
COPS7B-215ENST00000450501 PCF11O94913 1555 aaKnown RBP30.11■■■□□ 2.41
COPS7B-215ENST00000450501 CDK13Q14004 1512 aaKnown RBP30.1■■■□□ 2.41
COPS7B-215ENST00000450501 PLEKHD1A6NEE1 506 aa30.08■■■□□ 2.41
COPS7B-215ENST00000450501 MAP3K4Q9Y6R4 1608 aa30.07■■■□□ 2.4
COPS7B-215ENST00000450501 FYCO1Q9BQS8 1478 aa30.06■■■□□ 2.4
COPS7B-215ENST00000450501 CFAP43Q8NDM7 1665 aa30.04■■■□□ 2.4
COPS7B-215ENST00000450501 LRRIQ1Q96JM4 1722 aa30.03■■■□□ 2.4
COPS7B-215ENST00000450501 CDK11AQ9UQ88 783 aaPredicted RBP30.01■■■□□ 2.39
COPS7B-215ENST00000450501 CCDC18Q5T9S5 1454 aa30■■■□□ 2.39
COPS7B-215ENST00000450501 PPRC1Q5VV67 1664 aaKnown RBP30■■■□□ 2.39
COPS7B-215ENST00000450501 CD109Q6YHK3 1445 aa29.97■■■□□ 2.39
COPS7B-215ENST00000450501 ABCA9Q8IUA7 1624 aa29.97■■■□□ 2.39
COPS7B-215ENST00000450501 TEX14Q8IWB6 1497 aa29.95■■■□□ 2.39
COPS7B-215ENST00000450501 PHF23Q9BUL5 403 aaPredicted RBP29.94■■■□□ 2.38
COPS7B-215ENST00000450501 MAGI3Q5TCQ9 1506 aa29.91■■■□□ 2.38
COPS7B-215ENST00000450501 TROQ12816 1431 aaPredicted RBP29.88■■■□□ 2.37
COPS7B-215ENST00000450501 VPS8Q8N3P4 1428 aa29.87■■■□□ 2.37
COPS7B-215ENST00000450501 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.86■■■□□ 2.37
COPS7B-215ENST00000450501 KDM6BO15054 1643 aa29.85■■■□□ 2.37
COPS7B-215ENST00000450501 KIF14Q15058 1648 aa29.82■■■□□ 2.36
COPS7B-215ENST00000450501 TTC37Q6PGP7 1564 aa29.81■■■□□ 2.36
COPS7B-215ENST00000450501 PHLDB1Q86UU1 1377 aa29.73■■■□□ 2.35
COPS7B-215ENST00000450501 NEO1Q92859 1461 aa29.72■■■□□ 2.35
COPS7B-215ENST00000450501 MYO5CQ9NQX4 1742 aa29.71■■■□□ 2.35
COPS7B-215ENST00000450501 MTUS2Q5JR59 1369 aa29.7■■■□□ 2.35
COPS7B-215ENST00000450501 PLCH2O75038 1416 aa29.69■■■□□ 2.34
COPS7B-215ENST00000450501 CFAP74Q9C0B2 1584 aa29.69■■■□□ 2.34
COPS7B-215ENST00000450501 COL17A1Q9UMD9 1497 aaPredicted RBP29.68■■■□□ 2.34
COPS7B-215ENST00000450501 FANCAO15360 1455 aa29.67■■■□□ 2.34
COPS7B-215ENST00000450501 TIAM1Q13009 1591 aa29.66■■■□□ 2.34
COPS7B-215ENST00000450501 ARAP3Q8WWN8 1544 aa29.66■■■□□ 2.34
COPS7B-215ENST00000450501 EHBP1L1Q8N3D4 1523 aa29.65■■■□□ 2.34
COPS7B-215ENST00000450501 MAP3K1Q13233 1512 aa29.61■■■□□ 2.33
COPS7B-215ENST00000450501 AKNAQ7Z591 1439 aa29.6■■■□□ 2.33
COPS7B-215ENST00000450501 EFCAB2Q5VUJ9 269 aa29.59■■■□□ 2.33
COPS7B-215ENST00000450501 ARHGAP5Q13017 1502 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms