RNA–Protein interactions for RNA: ENST00000450338.5

SEMA3F-207, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 1,693 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-207ENST00000450338 FBLN2P98095 1184 aa35.44■■■■□ 3.26
SEMA3F-207ENST00000450338 RANGAP1P46060 587 aaPredicted RBP35.43■■■■□ 3.26
SEMA3F-207ENST00000450338 CHD1O14646 1710 aa35.36■■■■□ 3.25
SEMA3F-207ENST00000450338 CEP170Q5SW79 1584 aa35.31■■■■□ 3.24
SEMA3F-207ENST00000450338 IQGAP2Q13576 1575 aa35.3■■■■□ 3.24
SEMA3F-207ENST00000450338 KIAA0586Q9BVV6 1533 aa35.29■■■■□ 3.24
SEMA3F-207ENST00000450338 NUP160Q12769 1436 aa35.29■■■■□ 3.24
SEMA3F-207ENST00000450338 ARHGAP35Q9NRY4 1499 aa35.26■■■■□ 3.24
SEMA3F-207ENST00000450338 EFCAB5A4FU69 1503 aa35.21■■■■□ 3.23
SEMA3F-207ENST00000450338 ARAP1Q96P48 1450 aa35.18■■■■□ 3.22
SEMA3F-207ENST00000450338 SAMD9Q5K651 1589 aa35.14■■■■□ 3.22
SEMA3F-207ENST00000450338 UGGT2Q9NYU1 1516 aa35.12■■■■□ 3.21
SEMA3F-207ENST00000450338 VPS8Q8N3P4 1428 aa35.1■■■■□ 3.21
SEMA3F-207ENST00000450338 P3H3Q8IVL6 736 aa35.06■■■■□ 3.2
SEMA3F-207ENST00000450338 FHOD3Q2V2M9 1422 aa35.02■■■■□ 3.2
SEMA3F-207ENST00000450338 JPH4Q96JJ6 628 aa34.99■■■■□ 3.19
SEMA3F-207ENST00000450338 DISP1Q96F81 1524 aa34.95■■■■□ 3.19
SEMA3F-207ENST00000450338 KIAA0556O60303 1618 aa34.94■■■■□ 3.18
SEMA3F-207ENST00000450338 CLASP1Q7Z460 1538 aa34.93■■■■□ 3.18
SEMA3F-207ENST00000450338 SHROOM2Q13796 1616 aa34.89■■■■□ 3.18
SEMA3F-207ENST00000450338 FMN1Q68DA7 1419 aa34.88■■■■□ 3.17
SEMA3F-207ENST00000450338 CARMIL2Q6F5E8 1435 aa34.87■■■■□ 3.17
SEMA3F-207ENST00000450338 PRG4Q92954 1404 aaPredicted RBP34.8■■■■□ 3.16
SEMA3F-207ENST00000450338 OSCARQ8IYS5 282 aa34.79■■■■□ 3.16
SEMA3F-207ENST00000450338 PCF11O94913 1555 aaKnown RBP34.78■■■■□ 3.16
SEMA3F-207ENST00000450338 APLP2Q06481 763 aa34.76■■■■□ 3.15
SEMA3F-207ENST00000450338 CASKIN1Q8WXD9 1431 aa34.75■■■■□ 3.15
SEMA3F-207ENST00000450338 FYCO1Q9BQS8 1478 aa34.73■■■■□ 3.15
SEMA3F-207ENST00000450338 PPARGC1BQ86YN6 1023 aaKnown RBP34.65■■■■□ 3.14
SEMA3F-207ENST00000450338 TTBK1Q5TCY1 1321 aaPredicted RBP34.65■■■■□ 3.14
SEMA3F-207ENST00000450338 ATP1B4Q9UN42 357 aaPredicted RBP34.64■■■■□ 3.14
SEMA3F-207ENST00000450338 ERCC6L2Q5T890 1561 aa34.62■■■■□ 3.13
SEMA3F-207ENST00000450338 DNAJC5Q9H3Z4 198 aa34.6■■■■□ 3.13
SEMA3F-207ENST00000450338 MAP3K1Q13233 1512 aa34.6■■■■□ 3.13
SEMA3F-207ENST00000450338 HECW1Q76N89 1606 aa34.57■■■■□ 3.13
SEMA3F-207ENST00000450338 TIAM1Q13009 1591 aa34.57■■■■□ 3.12
SEMA3F-207ENST00000450338 RAPGEF6Q8TEU7 1601 aa34.56■■■■□ 3.12
SEMA3F-207ENST00000450338 PTPRGP23470 1445 aa34.55■■■■□ 3.12
SEMA3F-207ENST00000450338 CFAP43Q8NDM7 1665 aa34.54■■■■□ 3.12
SEMA3F-207ENST00000450338 LRRIQ1Q96JM4 1722 aa34.54■■■■□ 3.12
SEMA3F-207ENST00000450338 PLB1Q6P1J6 1458 aa34.49■■■■□ 3.11
SEMA3F-207ENST00000450338 ABCA8O94911 1581 aa34.47■■■■□ 3.11
SEMA3F-207ENST00000450338 CCDC18Q5T9S5 1454 aa34.46■■■■□ 3.11
SEMA3F-207ENST00000450338 KANK4Q5T7N3 995 aaPredicted RBP34.45■■■■□ 3.11
SEMA3F-207ENST00000450338 EPRSP07814 1512 aaKnown RBP34.44■■■■□ 3.1
SEMA3F-207ENST00000450338 NUP153P49790 1475 aaKnown RBP34.43■■■■□ 3.1
SEMA3F-207ENST00000450338 LRRC9Q6ZRR7 1453 aa34.4■■■■□ 3.1
SEMA3F-207ENST00000450338 CDK13Q14004 1512 aaKnown RBP34.35■■■■□ 3.09
SEMA3F-207ENST00000450338 UACAQ9BZF9 1416 aa34.35■■■■□ 3.09
SEMA3F-207ENST00000450338 TRIM26Q12899 539 aaPredicted RBP34.35■■■■□ 3.09
SEMA3F-207ENST00000450338 ARID3CA6NKF2 412 aa34.31■■■■□ 3.08
SEMA3F-207ENST00000450338 ABCC2Q92887 1545 aa34.27■■■■□ 3.08
SEMA3F-207ENST00000450338 MTUS2Q5JR59 1369 aa34.27■■■■□ 3.08
SEMA3F-207ENST00000450338 ARHGEF11O15085 1522 aa34.24■■■■□ 3.07
SEMA3F-207ENST00000450338 EHBP1L1Q8N3D4 1523 aa34.23■■■■□ 3.07
SEMA3F-207ENST00000450338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.22■■■■□ 3.07
SEMA3F-207ENST00000450338 HNRNPUL2Q1KMD3 747 aaKnown RBP34.22■■■■□ 3.07
SEMA3F-207ENST00000450338 UHRF1BP1LA0JNW5 1464 aa34.22■■■■□ 3.07
SEMA3F-207ENST00000450338 ATP10BO94823 1461 aa34.22■■■■□ 3.07
SEMA3F-207ENST00000450338 MAGI3Q5TCQ9 1506 aa34.21■■■■□ 3.07
SEMA3F-207ENST00000450338 RIMBP3CA6NJZ7 1639 aa34.21■■■■□ 3.07
SEMA3F-207ENST00000450338 RIMBP3BA6NNM3 1639 aa34.21■■■■□ 3.07
SEMA3F-207ENST00000450338 RIMBP3Q9UFD9 1639 aa34.21■■■■□ 3.07
SEMA3F-207ENST00000450338 CDK11AQ9UQ88 783 aaPredicted RBP34.19■■■■□ 3.06
SEMA3F-207ENST00000450338 PCGF6Q9BYE7 350 aa34.18■■■■□ 3.06
SEMA3F-207ENST00000450338 SUPT6HQ7KZ85 1726 aaKnown RBP34.14■■■■□ 3.06
SEMA3F-207ENST00000450338 ADCY10Q96PN6 1610 aa34.1■■■■□ 3.05
SEMA3F-207ENST00000450338 TROQ12816 1431 aaPredicted RBP34.07■■■■□ 3.04
SEMA3F-207ENST00000450338 KDM5BQ9UGL1 1544 aa34.07■■■■□ 3.04
SEMA3F-207ENST00000450338 NCOA2Q15596 1464 aa34.06■■■■□ 3.04
SEMA3F-207ENST00000450338 ZCCHC11Q5TAX3 1644 aaKnown RBP34.05■■■■□ 3.04
SEMA3F-207ENST00000450338 PLEKHD1A6NEE1 506 aa34.05■■■■□ 3.04
SEMA3F-207ENST00000450338 PHLDB1Q86UU1 1377 aa34.04■■■■□ 3.04
SEMA3F-207ENST00000450338 RRBP1Q9P2E9 1410 aaKnown RBP33.98■■■■□ 3.03
SEMA3F-207ENST00000450338 KIF14Q15058 1648 aa33.92■■■■□ 3.02
SEMA3F-207ENST00000450338 CCNB3Q8WWL7 1395 aa33.9■■■■□ 3.02
SEMA3F-207ENST00000450338 MYOM3Q5VTT5 1437 aa33.9■■■■□ 3.02
SEMA3F-207ENST00000450338 CYB5RLQ6IPT4 315 aa33.9■■■■□ 3.02
SEMA3F-207ENST00000450338 FGD6Q6ZV73 1430 aa33.85■■■■□ 3.01
SEMA3F-207ENST00000450338 NPM1P06748 294 aaKnown RBP eCLIP33.84■■■■□ 3.01
SEMA3F-207ENST00000450338 ABCC10Q5T3U5 1492 aa33.79■■■■□ 3
SEMA3F-207ENST00000450338 ITSN2Q9NZM3 1697 aa33.77■■■■□ 3
SEMA3F-207ENST00000450338 WDR7Q9Y4E6 1490 aa33.75■■■□□ 2.99
SEMA3F-207ENST00000450338 MIA2Q96PC5 1412 aa33.75■■■□□ 2.99
SEMA3F-207ENST00000450338 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.74■■■□□ 2.99
SEMA3F-207ENST00000450338 FAM50AQ14320 339 aaKnown RBP33.74■■■□□ 2.99
SEMA3F-207ENST00000450338 PTPN23Q9H3S7 1636 aa33.73■■■□□ 2.99
SEMA3F-207ENST00000450338 GPATCH8Q9UKJ3 1502 aaKnown RBP33.73■■■□□ 2.99
SEMA3F-207ENST00000450338 ASXL2Q76L83 1435 aa33.73■■■□□ 2.99
SEMA3F-207ENST00000450338 KCNH8Q96L42 1107 aa33.72■■■□□ 2.99
SEMA3F-207ENST00000450338 CDC42BPAQ5VT25 1732 aa33.72■■■□□ 2.99
SEMA3F-207ENST00000450338 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.7■■■□□ 2.99
SEMA3F-207ENST00000450338 TTC37Q6PGP7 1564 aa33.67■■■□□ 2.98
SEMA3F-207ENST00000450338 TCOF1Q13428 1488 aaKnown RBP33.67■■■□□ 2.98
SEMA3F-207ENST00000450338 CFDP1Q9UEE9 299 aaPredicted RBP33.64■■■□□ 2.98
SEMA3F-207ENST00000450338 PREX2Q70Z35 1606 aa33.61■■■□□ 2.97
SEMA3F-207ENST00000450338 MYO5CQ9NQX4 1742 aa33.61■■■□□ 2.97
SEMA3F-207ENST00000450338 MAPKBP1O60336 1514 aa33.6■■■□□ 2.97
SEMA3F-207ENST00000450338 CDC42BPBQ9Y5S2 1711 aa33.59■■■□□ 2.97
SEMA3F-207ENST00000450338 ITGAEP38570 1179 aa33.58■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms