RNA–Protein interactions for RNA: ENST00000448693.2

SPCS1-203, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 2

Gene SPCS1, Length 826 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-203ENST00000448693 ABCA10Q8WWZ4 1543 aa17.74■□□□□ 0.43
SPCS1-203ENST00000448693 GRIN2BQ13224 1484 aa17.72■□□□□ 0.43
SPCS1-203ENST00000448693 MAGI1Q96QZ7 1491 aaPredicted RBP17.72■□□□□ 0.43
SPCS1-203ENST00000448693 WRNQ14191 1432 aaPredicted RBP eCLIP17.71■□□□□ 0.43
SPCS1-203ENST00000448693 GAPVD1Q14C86 1478 aa17.7■□□□□ 0.42
SPCS1-203ENST00000448693 CLASP1Q7Z460 1538 aa17.7■□□□□ 0.42
SPCS1-203ENST00000448693 FBLN2P98095 1184 aa17.68■□□□□ 0.42
SPCS1-203ENST00000448693 ADAMTS12P58397 1594 aa17.67■□□□□ 0.42
SPCS1-203ENST00000448693 SYNJ2O15056 1496 aa17.65■□□□□ 0.42
SPCS1-203ENST00000448693 FOXD4L1Q9NU39 408 aa17.63■□□□□ 0.41
SPCS1-203ENST00000448693 ARAP1Q96P48 1450 aa17.63■□□□□ 0.41
SPCS1-203ENST00000448693 SLC4A2P04920 1241 aa17.57■□□□□ 0.4
SPCS1-203ENST00000448693 CEP170Q5SW79 1584 aa17.56■□□□□ 0.4
SPCS1-203ENST00000448693 GRIN2AQ12879 1464 aa17.55■□□□□ 0.4
SPCS1-203ENST00000448693 CHMP7Q8WUX9 453 aaPredicted RBP17.54■□□□□ 0.4
SPCS1-203ENST00000448693 ERICH3Q5RHP9 1530 aa17.52■□□□□ 0.4
SPCS1-203ENST00000448693 ERCC6L2Q5T890 1561 aa17.49■□□□□ 0.39
SPCS1-203ENST00000448693 SHROOM2Q13796 1616 aa17.46■□□□□ 0.39
SPCS1-203ENST00000448693 CYB5RLQ6IPT4 315 aa17.45■□□□□ 0.38
SPCS1-203ENST00000448693 FHAD1B1AJZ9 1412 aa17.45■□□□□ 0.38
SPCS1-203ENST00000448693 NUP160Q12769 1436 aa17.45■□□□□ 0.38
SPCS1-203ENST00000448693 RUSC2Q8N2Y8 1516 aa17.44■□□□□ 0.38
SPCS1-203ENST00000448693 DCAF8L1A6NGE4 600 aa17.42■□□□□ 0.38
SPCS1-203ENST00000448693 CUL7Q14999 1698 aa17.4■□□□□ 0.38
SPCS1-203ENST00000448693 KIF27Q86VH2 1401 aa17.31■□□□□ 0.36
SPCS1-203ENST00000448693 IGF1RP08069 1367 aa17.24■□□□□ 0.35
SPCS1-203ENST00000448693 PRG4Q92954 1404 aaPredicted RBP17.23■□□□□ 0.35
SPCS1-203ENST00000448693 TRHP20396 242 aaPredicted RBP17.18■□□□□ 0.34
SPCS1-203ENST00000448693 KIF13AQ9H1H9 1805 aa17.17■□□□□ 0.34
SPCS1-203ENST00000448693 MYCNP04198 464 aaPredicted RBP17.17■□□□□ 0.34
SPCS1-203ENST00000448693 KIAA0586Q9BVV6 1533 aa17.16■□□□□ 0.34
SPCS1-203ENST00000448693 ADCY10Q96PN6 1610 aa17.16■□□□□ 0.34
SPCS1-203ENST00000448693 CTTNBP2Q8WZ74 1663 aa17.16■□□□□ 0.34
SPCS1-203ENST00000448693 IQGAP2Q13576 1575 aa17.15■□□□□ 0.34
SPCS1-203ENST00000448693 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.15■□□□□ 0.34
SPCS1-203ENST00000448693 CARMIL1Q5VZK9 1371 aa17.15■□□□□ 0.34
SPCS1-203ENST00000448693 JPH4Q96JJ6 628 aa17.12■□□□□ 0.33
SPCS1-203ENST00000448693 RAPGEF2Q9Y4G8 1499 aa17.06■□□□□ 0.32
SPCS1-203ENST00000448693 KIAA0556O60303 1618 aa17.03■□□□□ 0.32
SPCS1-203ENST00000448693 DISP1Q96F81 1524 aa17.02■□□□□ 0.32
SPCS1-203ENST00000448693 DIP2BQ9P265 1576 aa17.02■□□□□ 0.31
SPCS1-203ENST00000448693 MAPKBP1O60336 1514 aa17.01■□□□□ 0.31
SPCS1-203ENST00000448693 UGGT2Q9NYU1 1516 aa17■□□□□ 0.31
SPCS1-203ENST00000448693 U3KPZ7 1027 aaPredicted RBP16.98■□□□□ 0.31
SPCS1-203ENST00000448693 TSPOAP1O95153 1857 aa16.97■□□□□ 0.31
SPCS1-203ENST00000448693 TTBK1Q5TCY1 1321 aaPredicted RBP16.96■□□□□ 0.31
SPCS1-203ENST00000448693 PRXQ9BXM0 1461 aa16.95■□□□□ 0.3
SPCS1-203ENST00000448693 CARMIL2Q6F5E8 1435 aa16.95■□□□□ 0.3
SPCS1-203ENST00000448693 ATXN8OSP0DMR3 200 aa16.94■□□□□ 0.3
SPCS1-203ENST00000448693 TNIKQ9UKE5 1360 aa16.93■□□□□ 0.3
SPCS1-203ENST00000448693 PTPRGP23470 1445 aa16.93■□□□□ 0.3
SPCS1-203ENST00000448693 POTEDQ86YR6 584 aa16.92■□□□□ 0.3
SPCS1-203ENST00000448693 ABCC10Q5T3U5 1492 aa16.92■□□□□ 0.3
SPCS1-203ENST00000448693 ZCCHC11Q5TAX3 1644 aaKnown RBP16.92■□□□□ 0.3
SPCS1-203ENST00000448693 ABCC2Q92887 1545 aa16.91■□□□□ 0.3
SPCS1-203ENST00000448693 PPRC1Q5VV67 1664 aaKnown RBP16.87■□□□□ 0.29
SPCS1-203ENST00000448693 UHRF1BP1LA0JNW5 1464 aa16.86■□□□□ 0.29
SPCS1-203ENST00000448693 UACAQ9BZF9 1416 aa16.85■□□□□ 0.29
SPCS1-203ENST00000448693 SAMD9Q5K651 1589 aa16.83■□□□□ 0.28
SPCS1-203ENST00000448693 ABCA8O94911 1581 aa16.82■□□□□ 0.28
SPCS1-203ENST00000448693 PLB1Q6P1J6 1458 aa16.82■□□□□ 0.28
SPCS1-203ENST00000448693 NPM1P06748 294 aaKnown RBP eCLIP16.82■□□□□ 0.28
SPCS1-203ENST00000448693 ATF5Q9Y2D1 282 aaPredicted RBP16.82■□□□□ 0.28
SPCS1-203ENST00000448693 KDM5BQ9UGL1 1544 aa16.81■□□□□ 0.28
SPCS1-203ENST00000448693 ASXL2Q76L83 1435 aa16.81■□□□□ 0.28
SPCS1-203ENST00000448693 KDM6BO15054 1643 aa16.81■□□□□ 0.28
SPCS1-203ENST00000448693 GOLGA3Q08378 1498 aa16.8■□□□□ 0.28
SPCS1-203ENST00000448693 FAM69CQ0P6D2 419 aa16.8■□□□□ 0.28
SPCS1-203ENST00000448693 KIF21BO75037 1637 aa16.8■□□□□ 0.28
SPCS1-203ENST00000448693 MAP3K4Q9Y6R4 1608 aa16.78■□□□□ 0.28
SPCS1-203ENST00000448693 GLI2P10070 1586 aa16.77■□□□□ 0.28
SPCS1-203ENST00000448693 EEA1Q15075 1411 aa16.77■□□□□ 0.27
SPCS1-203ENST00000448693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.75■□□□□ 0.27
SPCS1-203ENST00000448693 HNRNPUL2Q1KMD3 747 aaKnown RBP16.75■□□□□ 0.27
SPCS1-203ENST00000448693 SAMD1Q6SPF0 538 aaPredicted RBP16.75■□□□□ 0.27
SPCS1-203ENST00000448693 FAM9AQ8IZU1 332 aaPredicted RBP16.74■□□□□ 0.27
SPCS1-203ENST00000448693 EPRSP07814 1512 aaKnown RBP16.73■□□□□ 0.27
SPCS1-203ENST00000448693 RAPGEF6Q8TEU7 1601 aa16.71■□□□□ 0.27
SPCS1-203ENST00000448693 WDR7Q9Y4E6 1490 aa16.7■□□□□ 0.26
SPCS1-203ENST00000448693 CFAP43Q8NDM7 1665 aa16.69■□□□□ 0.26
SPCS1-203ENST00000448693 P3H3Q8IVL6 736 aa16.67■□□□□ 0.26
SPCS1-203ENST00000448693 FHOD3Q2V2M9 1422 aa16.66■□□□□ 0.26
SPCS1-203ENST00000448693 ARID3CA6NKF2 412 aa16.63■□□□□ 0.25
SPCS1-203ENST00000448693 RANGAP1P46060 587 aaPredicted RBP16.63■□□□□ 0.25
SPCS1-203ENST00000448693 EFCAB5A4FU69 1503 aa16.63■□□□□ 0.25
SPCS1-203ENST00000448693 RNF39Q9H2S5 420 aa16.59■□□□□ 0.25
SPCS1-203ENST00000448693 ATP10BO94823 1461 aa16.59■□□□□ 0.25
SPCS1-203ENST00000448693 NUP153P49790 1475 aaKnown RBP16.59■□□□□ 0.25
SPCS1-203ENST00000448693 COL17A1Q9UMD9 1497 aaPredicted RBP16.58■□□□□ 0.24
SPCS1-203ENST00000448693 ABCA9Q8IUA7 1624 aa16.57■□□□□ 0.24
SPCS1-203ENST00000448693 TEX14Q8IWB6 1497 aa16.57■□□□□ 0.24
SPCS1-203ENST00000448693 LRRIQ1Q96JM4 1722 aa16.56■□□□□ 0.24
SPCS1-203ENST00000448693 CDK13Q14004 1512 aaKnown RBP16.52■□□□□ 0.24
SPCS1-203ENST00000448693 MAGI3Q5TCQ9 1506 aa16.52■□□□□ 0.24
SPCS1-203ENST00000448693 CD109Q6YHK3 1445 aa16.51■□□□□ 0.23
SPCS1-203ENST00000448693 ARHGAP35Q9NRY4 1499 aa16.5■□□□□ 0.23
SPCS1-203ENST00000448693 KCNH8Q96L42 1107 aa16.5■□□□□ 0.23
SPCS1-203ENST00000448693 TTC37Q6PGP7 1564 aa16.5■□□□□ 0.23
SPCS1-203ENST00000448693 HECW1Q76N89 1606 aa16.49■□□□□ 0.23
SPCS1-203ENST00000448693 PCF11O94913 1555 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms