RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 HNRNPUQ00839 825 aaKnown RBP eCLIP22.19■■□□□ 1.14
CHRD-205ENST00000448472 ARHGAP35Q9NRY4 1499 aa22.17■■□□□ 1.14
CHRD-205ENST00000448472 CNGB1Q14028 1251 aaPredicted RBP22.17■■□□□ 1.14
CHRD-205ENST00000448472 TONSLQ96HA7 1378 aa22.16■■□□□ 1.14
CHRD-205ENST00000448472 ERICH3Q5RHP9 1530 aa22.15■■□□□ 1.14
CHRD-205ENST00000448472 PEG3Q9GZU2 1588 aa22.14■■□□□ 1.14
CHRD-205ENST00000448472 CUX2O14529 1486 aa22.12■■□□□ 1.13
CHRD-205ENST00000448472 PPP1R15AO75807 674 aaPredicted RBP22.1■■□□□ 1.13
CHRD-205ENST00000448472 PHLDB1Q86UU1 1377 aa22.1■■□□□ 1.13
CHRD-205ENST00000448472 WDR97A6NE52 1622 aa22.09■■□□□ 1.13
CHRD-205ENST00000448472 BCL11AQ9H165 835 aa22.09■■□□□ 1.13
CHRD-205ENST00000448472 CARMIL1Q5VZK9 1371 aa22.07■■□□□ 1.12
CHRD-205ENST00000448472 CDK11AQ9UQ88 783 aaPredicted RBP22.06■■□□□ 1.12
CHRD-205ENST00000448472 CUX1P39880 1505 aa22.06■■□□□ 1.12
CHRD-205ENST00000448472 CCER2I3L3R5 266 aa22.03■■□□□ 1.12
CHRD-205ENST00000448472 MAPKBP1O60336 1514 aa22.02■■□□□ 1.12
CHRD-205ENST00000448472 IGF1RP08069 1367 aa22.01■■□□□ 1.11
CHRD-205ENST00000448472 CHIC2Q9UKJ5 165 aa22■■□□□ 1.11
CHRD-205ENST00000448472 FAM9BQ8IZU0 186 aa21.97■■□□□ 1.11
CHRD-205ENST00000448472 POLR3GLQ9BT43 218 aa21.96■■□□□ 1.11
CHRD-205ENST00000448472 LRRC9Q6ZRR7 1453 aa21.95■■□□□ 1.11
CHRD-205ENST00000448472 TIMELESSQ9UNS1 1208 aa21.95■■□□□ 1.1
CHRD-205ENST00000448472 BIVM-ERCC5R4GMW8 1640 aa21.94■■□□□ 1.1
CHRD-205ENST00000448472 ARID3CA6NKF2 412 aa21.94■■□□□ 1.1
CHRD-205ENST00000448472 FHOD3Q2V2M9 1422 aa21.93■■□□□ 1.1
CHRD-205ENST00000448472 RRP7BPQ9NSQ0 103 aa21.93■■□□□ 1.1
CHRD-205ENST00000448472 MTUS2Q5JR59 1369 aa21.92■■□□□ 1.1
CHRD-205ENST00000448472 FHAD1B1AJZ9 1412 aa21.92■■□□□ 1.1
CHRD-205ENST00000448472 TIAM1Q13009 1591 aa21.9■■□□□ 1.1
CHRD-205ENST00000448472 SENP3-EIF4A1A0A087X0R7 540 aa21.86■■□□□ 1.09
CHRD-205ENST00000448472 HSPA5P11021 654 aaKnown RBP21.82■■□□□ 1.08
CHRD-205ENST00000448472 MSH5O43196 834 aa21.81■■□□□ 1.08
CHRD-205ENST00000448472 B4GALNT3Q6L9W6 998 aa21.81■■□□□ 1.08
CHRD-205ENST00000448472 MRS2Q9HD23 443 aa21.81■■□□□ 1.08
CHRD-205ENST00000448472 CFTRP13569 1480 aa21.79■■□□□ 1.08
CHRD-205ENST00000448472 EIF4G2P78344 907 aaKnown RBP eCLIP21.78■■□□□ 1.08
CHRD-205ENST00000448472 NCAPD3P42695 1498 aa21.78■■□□□ 1.08
CHRD-205ENST00000448472 FOXD1Q16676 465 aa21.77■■□□□ 1.08
CHRD-205ENST00000448472 FGD5Q6ZNL6 1462 aa21.76■■□□□ 1.07
CHRD-205ENST00000448472 CCDC18Q5T9S5 1454 aa21.74■■□□□ 1.07
CHRD-205ENST00000448472 ZNF326Q5BKZ1 582 aaKnown RBP21.74■■□□□ 1.07
CHRD-205ENST00000448472 CCDC184Q52MB2 194 aa21.73■■□□□ 1.07
CHRD-205ENST00000448472 PPP4R2Q9NY27 417 aa21.71■■□□□ 1.07
CHRD-205ENST00000448472 NBR1Q14596 966 aa21.7■■□□□ 1.06
CHRD-205ENST00000448472 WASHC2AQ641Q2 1341 aa21.69■■□□□ 1.06
CHRD-205ENST00000448472 CADPSQ9ULU8 1353 aa21.69■■□□□ 1.06
CHRD-205ENST00000448472 PCF11O94913 1555 aaKnown RBP21.69■■□□□ 1.06
CHRD-205ENST00000448472 FGD6Q6ZV73 1430 aa21.68■■□□□ 1.06
CHRD-205ENST00000448472 RAD54L2Q9Y4B4 1467 aa21.65■■□□□ 1.06
CHRD-205ENST00000448472 MAP3K1Q13233 1512 aa21.64■■□□□ 1.06
CHRD-205ENST00000448472 L3MBTL2Q969R5 705 aa21.62■■□□□ 1.05
CHRD-205ENST00000448472 HMGXB3Q12766 1538 aa21.62■■□□□ 1.05
CHRD-205ENST00000448472 UACAQ9BZF9 1416 aa21.62■■□□□ 1.05
CHRD-205ENST00000448472 FANCIQ9NVI1 1328 aa21.6■■□□□ 1.05
CHRD-205ENST00000448472 PTPRKQ15262 1439 aa21.59■■□□□ 1.05
CHRD-205ENST00000448472 FMN1Q68DA7 1419 aa21.58■■□□□ 1.04
CHRD-205ENST00000448472 CASKIN1Q8WXD9 1431 aa21.57■■□□□ 1.04
CHRD-205ENST00000448472 PRKRIP1Q9H875 184 aaPredicted RBP21.57■■□□□ 1.04
CHRD-205ENST00000448472 MPHOSPH9Q99550 1183 aa21.56■■□□□ 1.04
CHRD-205ENST00000448472 TDRD9Q8NDG6 1382 aaKnown RBP21.56■■□□□ 1.04
CHRD-205ENST00000448472 CCDC136Q96JN2 1154 aa21.55■■□□□ 1.04
CHRD-205ENST00000448472 C11orf95C9JLR9 678 aaPredicted RBP21.54■■□□□ 1.04
CHRD-205ENST00000448472 FYCO1Q9BQS8 1478 aa21.54■■□□□ 1.04
CHRD-205ENST00000448472 HFM1A2PYH4 1435 aa21.53■■□□□ 1.04
CHRD-205ENST00000448472 SLC4A1APQ9BWU0 796 aaKnown RBP21.52■■□□□ 1.04
CHRD-205ENST00000448472 NAIPQ13075 1403 aa21.52■■□□□ 1.04
CHRD-205ENST00000448472 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.045e-7■■■■□ 20.7
CHRD-205ENST00000448472 SALL2Q9Y467 1007 aaPredicted RBP21.51■■□□□ 1.03
CHRD-205ENST00000448472 DEKP35659 375 aaKnown RBP21.5■■□□□ 1.03
CHRD-205ENST00000448472 FANCD2Q9BXW9 1451 aa21.5■■□□□ 1.03
CHRD-205ENST00000448472 NPM2Q86SE8 214 aaKnown RBP21.49■■□□□ 1.03
CHRD-205ENST00000448472 NCOA2Q15596 1464 aa21.48■■□□□ 1.03
CHRD-205ENST00000448472 DNAJC5BQ9UF47 199 aa21.48■■□□□ 1.03
CHRD-205ENST00000448472 MYOM3Q5VTT5 1437 aa21.47■■□□□ 1.03
CHRD-205ENST00000448472 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.47■■□□□ 1.03
CHRD-205ENST00000448472 ANP32AP39687 249 aaKnown RBP21.46■■□□□ 1.03
CHRD-205ENST00000448472 NOP58Q9Y2X3 529 aaKnown RBP21.46■■□□□ 1.03
CHRD-205ENST00000448472 RTL5Q5HYW3 569 aaPredicted RBP21.46■■□□□ 1.03
CHRD-205ENST00000448472 ERICH6BQ5W0A0 696 aa21.46■■□□□ 1.03
CHRD-205ENST00000448472 ZNF777Q9ULD5 760 aaPredicted RBP21.45■■□□□ 1.02
CHRD-205ENST00000448472 CNTLNQ9NXG0 1405 aa21.43■■□□□ 1.02
CHRD-205ENST00000448472 CFAP43Q8NDM7 1665 aa21.42■■□□□ 1.02
CHRD-205ENST00000448472 ZBED9Q6R2W3 1325 aa21.42■■□□□ 1.02
CHRD-205ENST00000448472 CCDC7Q96M83 1385 aa21.42■■□□□ 1.02
CHRD-205ENST00000448472 NBPF8Q3BBV2 869 aa21.42■■□□□ 1.02
CHRD-205ENST00000448472 TMC1Q8TDI8 760 aa21.42■■□□□ 1.02
CHRD-205ENST00000448472 PTPN23Q9H3S7 1636 aa21.41■■□□□ 1.02
CHRD-205ENST00000448472 KIF7Q2M1P5 1343 aa21.38■■□□□ 1.01
CHRD-205ENST00000448472 PAK3O75914 559 aaPredicted RBP21.38■■□□□ 1.01
CHRD-205ENST00000448472 ZBTB47Q9UFB7 747 aaPredicted RBP21.38■■□□□ 1.01
CHRD-205ENST00000448472 POLA1P09884 1462 aaPredicted RBP21.36■■□□□ 1.01
CHRD-205ENST00000448472 EFCAB5A4FU69 1503 aa21.36■■□□□ 1.01
CHRD-205ENST00000448472 KDM2AQ9Y2K7 1162 aa21.35■■□□□ 1.01
CHRD-205ENST00000448472 AKNAQ7Z591 1439 aa21.34■■□□□ 1.01
CHRD-205ENST00000448472 NESP48681 1621 aa21.33■■□□□ 1.01
CHRD-205ENST00000448472 MYT1LQ9UL68 1186 aa21.33■■□□□ 1.01
CHRD-205ENST00000448472 ZNF644Q9H582 1327 aaPredicted RBP21.31■■□□□ 1
CHRD-205ENST00000448472 NUDCQ9Y266 331 aa21.3■■□□□ 1
CHRD-205ENST00000448472 TOPBP1Q92547 1522 aa21.29■■□□□ 1
CHRD-205ENST00000448472 ABCA10Q8WWZ4 1543 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms