RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 FAM9AQ8IZU1 332 aaPredicted RBP21.7■■□□□ 1.06
ERGIC3-209ENST00000447986 PRXQ9BXM0 1461 aa21.68■■□□□ 1.06
ERGIC3-209ENST00000447986 ARHGEF11O15085 1522 aa21.65■■□□□ 1.06
ERGIC3-209ENST00000447986 KIAA0586Q9BVV6 1533 aa21.65■■□□□ 1.06
ERGIC3-209ENST00000447986 RIMBP3CA6NJZ7 1639 aa21.61■■□□□ 1.05
ERGIC3-209ENST00000447986 RIMBP3BA6NNM3 1639 aa21.61■■□□□ 1.05
ERGIC3-209ENST00000447986 RIMBP3Q9UFD9 1639 aa21.61■■□□□ 1.05
ERGIC3-209ENST00000447986 JPH4Q96JJ6 628 aa21.6■■□□□ 1.05
ERGIC3-209ENST00000447986 SHROOM2Q13796 1616 aa21.58■■□□□ 1.04
ERGIC3-209ENST00000447986 IQGAP2Q13576 1575 aa21.54■■□□□ 1.04
ERGIC3-209ENST00000447986 PRG4Q92954 1404 aaPredicted RBP21.53■■□□□ 1.04
ERGIC3-209ENST00000447986 KIF21BO75037 1637 aa21.52■■□□□ 1.04
ERGIC3-209ENST00000447986 CTTNBP2Q8WZ74 1663 aa21.49■■□□□ 1.03
ERGIC3-209ENST00000447986 ARAP1Q96P48 1450 aa21.48■■□□□ 1.03
ERGIC3-209ENST00000447986 CYB5RLQ6IPT4 315 aa21.47■■□□□ 1.03
ERGIC3-209ENST00000447986 CARMIL2Q6F5E8 1435 aa21.45■■□□□ 1.02
ERGIC3-209ENST00000447986 ERCC6L2Q5T890 1561 aa21.45■■□□□ 1.02
ERGIC3-209ENST00000447986 GOLGA3Q08378 1498 aa21.44■■□□□ 1.02
ERGIC3-209ENST00000447986 UGGT2Q9NYU1 1516 aa21.42■■□□□ 1.02
ERGIC3-209ENST00000447986 UBTFP17480 764 aaKnown RBP21.4■■□□□ 1.02
ERGIC3-209ENST00000447986 EHMT2Q96KQ7 1210 aa21.4■■□□□ 1.02
ERGIC3-209ENST00000447986 DISP1Q96F81 1524 aa21.35■■□□□ 1.01
ERGIC3-209ENST00000447986 TNIKQ9UKE5 1360 aa21.34■■□□□ 1.01
ERGIC3-209ENST00000447986 KIAA0556O60303 1618 aa21.32■■□□□ 1
ERGIC3-209ENST00000447986 PTPRGP23470 1445 aa21.31■■□□□ 1
ERGIC3-209ENST00000447986 TTBK1Q5TCY1 1321 aaPredicted RBP21.28■■□□□ 1
ERGIC3-209ENST00000447986 RANGAP1P46060 587 aaPredicted RBP21.27■■□□□ 1
ERGIC3-209ENST00000447986 SAMD9Q5K651 1589 aa21.22■□□□□ 0.99
ERGIC3-209ENST00000447986 P3H3Q8IVL6 736 aa21.22■□□□□ 0.99
ERGIC3-209ENST00000447986 EFCAB5A4FU69 1503 aa21.21■□□□□ 0.99
ERGIC3-209ENST00000447986 NPM1P06748 294 aaKnown RBP eCLIP21.18■□□□□ 0.98
ERGIC3-209ENST00000447986 UACAQ9BZF9 1416 aa21.17■□□□□ 0.98
ERGIC3-209ENST00000447986 ADCY10Q96PN6 1610 aa21.13■□□□□ 0.97
ERGIC3-209ENST00000447986 UHRF1BP1LA0JNW5 1464 aa21.13■□□□□ 0.97
ERGIC3-209ENST00000447986 FHOD3Q2V2M9 1422 aa21.12■□□□□ 0.97
ERGIC3-209ENST00000447986 ABCC2Q92887 1545 aa21.12■□□□□ 0.97
ERGIC3-209ENST00000447986 PLB1Q6P1J6 1458 aa21.09■□□□□ 0.97
ERGIC3-209ENST00000447986 ARHGAP35Q9NRY4 1499 aa21.09■□□□□ 0.97
ERGIC3-209ENST00000447986 FOXD1Q16676 465 aa21.09■□□□□ 0.97
ERGIC3-209ENST00000447986 LOC105371045A0A1W2PR82 267 aa21.07■□□□□ 0.96
ERGIC3-209ENST00000447986 ADRA2BP18089 450 aa21.07■□□□□ 0.96
ERGIC3-209ENST00000447986 ABCA8O94911 1581 aa21.06■□□□□ 0.96
ERGIC3-209ENST00000447986 CLIP1P30622 1438 aa21.06■□□□□ 0.96
ERGIC3-209ENST00000447986 FMN1Q68DA7 1419 aa21.04■□□□□ 0.96
ERGIC3-209ENST00000447986 TRHP20396 242 aaPredicted RBP21.03■□□□□ 0.96
ERGIC3-209ENST00000447986 KDM5BQ9UGL1 1544 aa21.02■□□□□ 0.96
ERGIC3-209ENST00000447986 MAPKBP1O60336 1514 aa21.01■□□□□ 0.95
ERGIC3-209ENST00000447986 RAPGEF6Q8TEU7 1601 aa21.01■□□□□ 0.95
ERGIC3-209ENST00000447986 CEP162Q5TB80 1403 aa20.99■□□□□ 0.95
ERGIC3-209ENST00000447986 PPP6R1Q9UPN7 881 aa20.96■□□□□ 0.95
ERGIC3-209ENST00000447986 ZCCHC11Q5TAX3 1644 aaKnown RBP20.96■□□□□ 0.95
ERGIC3-209ENST00000447986 ASXL2Q76L83 1435 aa20.93■□□□□ 0.94
ERGIC3-209ENST00000447986 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.93■□□□□ 0.94
ERGIC3-209ENST00000447986 HNRNPUL2Q1KMD3 747 aaKnown RBP20.93■□□□□ 0.94
ERGIC3-209ENST00000447986 ARID3CA6NKF2 412 aa20.92■□□□□ 0.94
ERGIC3-209ENST00000447986 ATP1B4Q9UN42 357 aaPredicted RBP20.92■□□□□ 0.94
ERGIC3-209ENST00000447986 NUP153P49790 1475 aaKnown RBP20.92■□□□□ 0.94
ERGIC3-209ENST00000447986 ATP10BO94823 1461 aa20.9■□□□□ 0.94
ERGIC3-209ENST00000447986 HECW1Q76N89 1606 aa20.89■□□□□ 0.94
ERGIC3-209ENST00000447986 ABCC10Q5T3U5 1492 aa20.89■□□□□ 0.93
ERGIC3-209ENST00000447986 FAM69CQ0P6D2 419 aa20.87■□□□□ 0.93
ERGIC3-209ENST00000447986 WDR7Q9Y4E6 1490 aa20.86■□□□□ 0.93
ERGIC3-209ENST00000447986 CASKIN1Q8WXD9 1431 aa20.85■□□□□ 0.93
ERGIC3-209ENST00000447986 DIP2BQ9P265 1576 aa20.84■□□□□ 0.93
ERGIC3-209ENST00000447986 FYCO1Q9BQS8 1478 aa20.82■□□□□ 0.92
ERGIC3-209ENST00000447986 PCF11O94913 1555 aaKnown RBP20.82■□□□□ 0.92
ERGIC3-209ENST00000447986 PLEKHD1A6NEE1 506 aa20.82■□□□□ 0.92
ERGIC3-209ENST00000447986 EPRSP07814 1512 aaKnown RBP20.81■□□□□ 0.92
ERGIC3-209ENST00000447986 CDK11AQ9UQ88 783 aaPredicted RBP20.81■□□□□ 0.92
ERGIC3-209ENST00000447986 KIF13AQ9H1H9 1805 aa20.79■□□□□ 0.92
ERGIC3-209ENST00000447986 KCNH8Q96L42 1107 aa20.78■□□□□ 0.92
ERGIC3-209ENST00000447986 CDK13Q14004 1512 aaKnown RBP20.78■□□□□ 0.92
ERGIC3-209ENST00000447986 CCDC18Q5T9S5 1454 aa20.78■□□□□ 0.92
ERGIC3-209ENST00000447986 GLI2P10070 1586 aa20.78■□□□□ 0.92
ERGIC3-209ENST00000447986 VPS8Q8N3P4 1428 aa20.74■□□□□ 0.91
ERGIC3-209ENST00000447986 LRRIQ1Q96JM4 1722 aa20.68■□□□□ 0.9
ERGIC3-209ENST00000447986 MAP3K4Q9Y6R4 1608 aa20.67■□□□□ 0.9
ERGIC3-209ENST00000447986 CD109Q6YHK3 1445 aa20.66■□□□□ 0.9
ERGIC3-209ENST00000447986 CFAP43Q8NDM7 1665 aa20.66■□□□□ 0.9
ERGIC3-209ENST00000447986 TROQ12816 1431 aaPredicted RBP20.65■□□□□ 0.9
ERGIC3-209ENST00000447986 ABCA9Q8IUA7 1624 aa20.64■□□□□ 0.89
ERGIC3-209ENST00000447986 TEX14Q8IWB6 1497 aa20.63■□□□□ 0.89
ERGIC3-209ENST00000447986 TSPOAP1O95153 1857 aa20.63■□□□□ 0.89
ERGIC3-209ENST00000447986 KIF14Q15058 1648 aa20.6■□□□□ 0.89
ERGIC3-209ENST00000447986 MAGI3Q5TCQ9 1506 aa20.6■□□□□ 0.89
ERGIC3-209ENST00000447986 MTUS2Q5JR59 1369 aa20.6■□□□□ 0.89
ERGIC3-209ENST00000447986 APLP2Q06481 763 aa20.6■□□□□ 0.89
ERGIC3-209ENST00000447986 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.59■□□□□ 0.896e-6■■■■□ 21.5
ERGIC3-209ENST00000447986 PPRC1Q5VV67 1664 aaKnown RBP20.56■□□□□ 0.88
ERGIC3-209ENST00000447986 TIAM1Q13009 1591 aa20.55■□□□□ 0.88
ERGIC3-209ENST00000447986 TTC37Q6PGP7 1564 aa20.54■□□□□ 0.88
ERGIC3-209ENST00000447986 MAP3K1Q13233 1512 aa20.54■□□□□ 0.88
ERGIC3-209ENST00000447986 EHBP1L1Q8N3D4 1523 aa20.53■□□□□ 0.88
ERGIC3-209ENST00000447986 PHLDB1Q86UU1 1377 aa20.51■□□□□ 0.87
ERGIC3-209ENST00000447986 PLCH2O75038 1416 aa20.5■□□□□ 0.87
ERGIC3-209ENST00000447986 KDM6BO15054 1643 aa20.49■□□□□ 0.87
ERGIC3-209ENST00000447986 NEO1Q92859 1461 aa20.49■□□□□ 0.87
ERGIC3-209ENST00000447986 FANCAO15360 1455 aa20.48■□□□□ 0.87
ERGIC3-209ENST00000447986 MYO5CQ9NQX4 1742 aa20.47■□□□□ 0.87
ERGIC3-209ENST00000447986 LRRC9Q6ZRR7 1453 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms