RNA–Protein interactions for RNA: ENST00000447456.1

CCDC18-205, Transcript of coiled-coil domain containing 18, humanhuman

TSL 1 (best)

Gene CCDC18, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-205ENST00000447456 NUP160Q12769 1436 aa14.96□□□□□ -0.01
CCDC18-205ENST00000447456 EHMT2Q96KQ7 1210 aa14.96□□□□□ -0.01
CCDC18-205ENST00000447456 KIAA0586Q9BVV6 1533 aa14.92□□□□□ -0.02
CCDC18-205ENST00000447456 CEP170Q5SW79 1584 aa14.92□□□□□ -0.02
CCDC18-205ENST00000447456 CTTNBP2Q8WZ74 1663 aa14.9□□□□□ -0.02
CCDC18-205ENST00000447456 LOC105371045A0A1W2PR82 267 aa14.9□□□□□ -0.02
CCDC18-205ENST00000447456 TNIKQ9UKE5 1360 aa14.89□□□□□ -0.03
CCDC18-205ENST00000447456 IQGAP2Q13576 1575 aa14.89□□□□□ -0.03
CCDC18-205ENST00000447456 CLASP1Q7Z460 1538 aa14.87□□□□□ -0.03
CCDC18-205ENST00000447456 JPH4Q96JJ6 628 aa14.85□□□□□ -0.03
CCDC18-205ENST00000447456 UGGT2Q9NYU1 1516 aa14.81□□□□□ -0.04
CCDC18-205ENST00000447456 CARMIL2Q6F5E8 1435 aa14.8□□□□□ -0.04
CCDC18-205ENST00000447456 RANGAP1P46060 587 aaPredicted RBP14.79□□□□□ -0.04
CCDC18-205ENST00000447456 SHROOM2Q13796 1616 aa14.79□□□□□ -0.04
CCDC18-205ENST00000447456 EFCAB5A4FU69 1503 aa14.77□□□□□ -0.04
CCDC18-205ENST00000447456 PRG4Q92954 1404 aaPredicted RBP14.77□□□□□ -0.04
CCDC18-205ENST00000447456 CLIP1P30622 1438 aa14.76□□□□□ -0.05
CCDC18-205ENST00000447456 CEP162Q5TB80 1403 aa14.76□□□□□ -0.05
CCDC18-205ENST00000447456 SAMD9Q5K651 1589 aa14.73□□□□□ -0.05
CCDC18-205ENST00000447456 DISP1Q96F81 1524 aa14.72□□□□□ -0.05
CCDC18-205ENST00000447456 KIAA0556O60303 1618 aa14.71□□□□□ -0.05
CCDC18-205ENST00000447456 ARHGAP35Q9NRY4 1499 aa14.69□□□□□ -0.06
CCDC18-205ENST00000447456 P3H3Q8IVL6 736 aa14.69□□□□□ -0.06
CCDC18-205ENST00000447456 ARHGEF11O15085 1522 aa14.68□□□□□ -0.06
CCDC18-205ENST00000447456 PTPRGP23470 1445 aa14.66□□□□□ -0.06
CCDC18-205ENST00000447456 FHOD3Q2V2M9 1422 aa14.66□□□□□ -0.06
CCDC18-205ENST00000447456 ERCC6L2Q5T890 1561 aa14.65□□□□□ -0.06
CCDC18-205ENST00000447456 DNAJC5Q9H3Z4 198 aa14.65□□□□□ -0.06
CCDC18-205ENST00000447456 FMN1Q68DA7 1419 aa14.65□□□□□ -0.06
CCDC18-205ENST00000447456 RIMBP3CA6NJZ7 1639 aa14.63□□□□□ -0.07
CCDC18-205ENST00000447456 RIMBP3BA6NNM3 1639 aa14.63□□□□□ -0.07
CCDC18-205ENST00000447456 RIMBP3Q9UFD9 1639 aa14.63□□□□□ -0.07
CCDC18-205ENST00000447456 TTBK1Q5TCY1 1321 aaPredicted RBP14.63□□□□□ -0.07
CCDC18-205ENST00000447456 ARAP1Q96P48 1450 aa14.63□□□□□ -0.07
CCDC18-205ENST00000447456 FOXD1Q16676 465 aa14.58□□□□□ -0.08
CCDC18-205ENST00000447456 VPS8Q8N3P4 1428 aa14.57□□□□□ -0.08
CCDC18-205ENST00000447456 UACAQ9BZF9 1416 aa14.57□□□□□ -0.08
CCDC18-205ENST00000447456 CYB5RLQ6IPT4 315 aa14.56□□□□□ -0.08
CCDC18-205ENST00000447456 CASKIN1Q8WXD9 1431 aa14.54□□□□□ -0.08
CCDC18-205ENST00000447456 FYCO1Q9BQS8 1478 aa14.54□□□□□ -0.08
CCDC18-205ENST00000447456 RAPGEF6Q8TEU7 1601 aa14.53□□□□□ -0.08
CCDC18-205ENST00000447456 ABCA8O94911 1581 aa14.53□□□□□ -0.08
CCDC18-205ENST00000447456 UHRF1BP1LA0JNW5 1464 aa14.53□□□□□ -0.08
CCDC18-205ENST00000447456 PLB1Q6P1J6 1458 aa14.53□□□□□ -0.08
CCDC18-205ENST00000447456 ATP1B4Q9UN42 357 aaPredicted RBP14.53□□□□□ -0.08
CCDC18-205ENST00000447456 ABCC2Q92887 1545 aa14.52□□□□□ -0.08
CCDC18-205ENST00000447456 HECW1Q76N89 1606 aa14.51□□□□□ -0.09
CCDC18-205ENST00000447456 NPM1P06748 294 aaKnown RBP eCLIP14.5□□□□□ -0.09
CCDC18-205ENST00000447456 APLP2Q06481 763 aa14.5□□□□□ -0.09
CCDC18-205ENST00000447456 PCF11O94913 1555 aaKnown RBP14.49□□□□□ -0.09
CCDC18-205ENST00000447456 CCDC18Q5T9S5 1454 aa14.48□□□□□ -0.09
CCDC18-205ENST00000447456 ADCY10Q96PN6 1610 aa14.47□□□□□ -0.09
CCDC18-205ENST00000447456 NUP153P49790 1475 aaKnown RBP14.46□□□□□ -0.09
CCDC18-205ENST00000447456 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.45□□□□□ -0.1
CCDC18-205ENST00000447456 HNRNPUL2Q1KMD3 747 aaKnown RBP14.45□□□□□ -0.1
CCDC18-205ENST00000447456 CDK11AQ9UQ88 783 aaPredicted RBP14.45□□□□□ -0.1
CCDC18-205ENST00000447456 EPRSP07814 1512 aaKnown RBP14.44□□□□□ -0.1
CCDC18-205ENST00000447456 KDM5BQ9UGL1 1544 aa14.44□□□□□ -0.1
CCDC18-205ENST00000447456 ATP10BO94823 1461 aa14.43□□□□□ -0.1
CCDC18-205ENST00000447456 ARID3CA6NKF2 412 aa14.42□□□□□ -0.1
CCDC18-205ENST00000447456 MAP3K1Q13233 1512 aa14.41□□□□□ -0.1
CCDC18-205ENST00000447456 ZCCHC11Q5TAX3 1644 aaKnown RBP14.4□□□□□ -0.1
CCDC18-205ENST00000447456 PLEKHD1A6NEE1 506 aa14.39□□□□□ -0.11
CCDC18-205ENST00000447456 CDK13Q14004 1512 aaKnown RBP14.39□□□□□ -0.11
CCDC18-205ENST00000447456 TIAM1Q13009 1591 aa14.38□□□□□ -0.11
CCDC18-205ENST00000447456 CFAP43Q8NDM7 1665 aa14.36□□□□□ -0.11
CCDC18-205ENST00000447456 MTUS2Q5JR59 1369 aa14.36□□□□□ -0.11
CCDC18-205ENST00000447456 LRRIQ1Q96JM4 1722 aa14.35□□□□□ -0.11
CCDC18-205ENST00000447456 MAPKBP1O60336 1514 aa14.35□□□□□ -0.11
CCDC18-205ENST00000447456 ASXL2Q76L83 1435 aa14.34□□□□□ -0.11
CCDC18-205ENST00000447456 TROQ12816 1431 aaPredicted RBP14.33□□□□□ -0.11
CCDC18-205ENST00000447456 WDR7Q9Y4E6 1490 aa14.33□□□□□ -0.12
CCDC18-205ENST00000447456 LRRC9Q6ZRR7 1453 aa14.31□□□□□ -0.12
CCDC18-205ENST00000447456 EHBP1L1Q8N3D4 1523 aa14.31□□□□□ -0.12
CCDC18-205ENST00000447456 KCNH8Q96L42 1107 aa14.29□□□□□ -0.12
CCDC18-205ENST00000447456 KIF14Q15058 1648 aa14.28□□□□□ -0.12
CCDC18-205ENST00000447456 KANK4Q5T7N3 995 aaPredicted RBP14.27□□□□□ -0.13
CCDC18-205ENST00000447456 MAGI3Q5TCQ9 1506 aa14.26□□□□□ -0.13
CCDC18-205ENST00000447456 SUPT6HQ7KZ85 1726 aaKnown RBP14.26□□□□□ -0.13
CCDC18-205ENST00000447456 ABCC10Q5T3U5 1492 aa14.24□□□□□ -0.13
CCDC18-205ENST00000447456 FAM69CQ0P6D2 419 aa14.22□□□□□ -0.13
CCDC18-205ENST00000447456 NCOA2Q15596 1464 aa14.22□□□□□ -0.13
CCDC18-205ENST00000447456 GLI2P10070 1586 aa14.22□□□□□ -0.13
CCDC18-205ENST00000447456 CCNB3Q8WWL7 1395 aa14.22□□□□□ -0.13
CCDC18-205ENST00000447456 PPARGC1BQ86YN6 1023 aaKnown RBP14.21□□□□□ -0.13
CCDC18-205ENST00000447456 DIP2BQ9P265 1576 aa14.2□□□□□ -0.14
CCDC18-205ENST00000447456 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.2□□□□□ -0.14
CCDC18-205ENST00000447456 ABCA9Q8IUA7 1624 aa14.19□□□□□ -0.14
CCDC18-205ENST00000447456 CD109Q6YHK3 1445 aa14.18□□□□□ -0.14
CCDC18-205ENST00000447456 TRHP20396 242 aaPredicted RBP14.18□□□□□ -0.14
CCDC18-205ENST00000447456 TTC37Q6PGP7 1564 aa14.17□□□□□ -0.14
CCDC18-205ENST00000447456 ITSN2Q9NZM3 1697 aa14.16□□□□□ -0.14
CCDC18-205ENST00000447456 MYOM3Q5VTT5 1437 aa14.15□□□□□ -0.14
CCDC18-205ENST00000447456 MYO5CQ9NQX4 1742 aa14.15□□□□□ -0.14
CCDC18-205ENST00000447456 CFDP1Q9UEE9 299 aaPredicted RBP14.15□□□□□ -0.14
CCDC18-205ENST00000447456 ARAP3Q8WWN8 1544 aa14.15□□□□□ -0.14
CCDC18-205ENST00000447456 GPATCH8Q9UKJ3 1502 aaKnown RBP14.15□□□□□ -0.14
CCDC18-205ENST00000447456 PLCH2O75038 1416 aa14.15□□□□□ -0.14
CCDC18-205ENST00000447456 EFCAB2Q5VUJ9 269 aa14.14□□□□□ -0.15
CCDC18-205ENST00000447456 MAP3K4Q9Y6R4 1608 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms