RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 SHROOM2Q13796 1616 aa22.03■■□□□ 1.12
HLA-DOB-207ENST00000447394 RIMBP3CA6NJZ7 1639 aa22.02■■□□□ 1.12
HLA-DOB-207ENST00000447394 RIMBP3BA6NNM3 1639 aa22.02■■□□□ 1.12
HLA-DOB-207ENST00000447394 RIMBP3Q9UFD9 1639 aa22.02■■□□□ 1.12
HLA-DOB-207ENST00000447394 EHMT2Q96KQ7 1210 aa22■■□□□ 1.11
HLA-DOB-207ENST00000447394 ERCC6L2Q5T890 1561 aa21.99■■□□□ 1.11
HLA-DOB-207ENST00000447394 ARHGEF11O15085 1522 aa21.99■■□□□ 1.11
HLA-DOB-207ENST00000447394 KIAA0586Q9BVV6 1533 aa21.98■■□□□ 1.11
HLA-DOB-207ENST00000447394 IQGAP2Q13576 1575 aa21.98■■□□□ 1.11
HLA-DOB-207ENST00000447394 GOLGA3Q08378 1498 aa21.9■■□□□ 1.1
HLA-DOB-207ENST00000447394 PRG4Q92954 1404 aaPredicted RBP21.88■■□□□ 1.09
HLA-DOB-207ENST00000447394 ARAP1Q96P48 1450 aa21.85■■□□□ 1.09
HLA-DOB-207ENST00000447394 JPH4Q96JJ6 628 aa21.85■■□□□ 1.09
HLA-DOB-207ENST00000447394 UGGT2Q9NYU1 1516 aa21.83■■□□□ 1.09
HLA-DOB-207ENST00000447394 KIAA0556O60303 1618 aa21.8■■□□□ 1.08
HLA-DOB-207ENST00000447394 DISP1Q96F81 1524 aa21.8■■□□□ 1.08
HLA-DOB-207ENST00000447394 UBTFP17480 764 aaKnown RBP21.77■■□□□ 1.08
HLA-DOB-207ENST00000447394 RANGAP1P46060 587 aaPredicted RBP21.75■■□□□ 1.07
HLA-DOB-207ENST00000447394 SAMD9Q5K651 1589 aa21.74■■□□□ 1.07
HLA-DOB-207ENST00000447394 CARMIL2Q6F5E8 1435 aa21.7■■□□□ 1.06
HLA-DOB-207ENST00000447394 CYB5RLQ6IPT4 315 aa21.69■■□□□ 1.06
HLA-DOB-207ENST00000447394 TTBK1Q5TCY1 1321 aaPredicted RBP21.68■■□□□ 1.06
HLA-DOB-207ENST00000447394 LOC105371045A0A1W2PR82 267 aa21.67■■□□□ 1.06
HLA-DOB-207ENST00000447394 P3H3Q8IVL6 736 aa21.64■■□□□ 1.05
HLA-DOB-207ENST00000447394 TNIKQ9UKE5 1360 aa21.63■■□□□ 1.05
HLA-DOB-207ENST00000447394 EFCAB5A4FU69 1503 aa21.62■■□□□ 1.05
HLA-DOB-207ENST00000447394 ADCY10Q96PN6 1610 aa21.61■■□□□ 1.05
HLA-DOB-207ENST00000447394 FHOD3Q2V2M9 1422 aa21.61■■□□□ 1.05
HLA-DOB-207ENST00000447394 PTPRGP23470 1445 aa21.6■■□□□ 1.05
HLA-DOB-207ENST00000447394 ARHGAP35Q9NRY4 1499 aa21.59■■□□□ 1.05
HLA-DOB-207ENST00000447394 PLB1Q6P1J6 1458 aa21.53■■□□□ 1.04
HLA-DOB-207ENST00000447394 CLIP1P30622 1438 aa21.52■■□□□ 1.04
HLA-DOB-207ENST00000447394 ABCA8O94911 1581 aa21.52■■□□□ 1.04
HLA-DOB-207ENST00000447394 CEP162Q5TB80 1403 aa21.51■■□□□ 1.03
HLA-DOB-207ENST00000447394 ABCC2Q92887 1545 aa21.49■■□□□ 1.03
HLA-DOB-207ENST00000447394 RAPGEF6Q8TEU7 1601 aa21.48■■□□□ 1.03
HLA-DOB-207ENST00000447394 UACAQ9BZF9 1416 aa21.47■■□□□ 1.03
HLA-DOB-207ENST00000447394 ZCCHC11Q5TAX3 1644 aaKnown RBP21.44■■□□□ 1.02
HLA-DOB-207ENST00000447394 UHRF1BP1LA0JNW5 1464 aa21.44■■□□□ 1.02
HLA-DOB-207ENST00000447394 PCF11O94913 1555 aaKnown RBP21.41■■□□□ 1.02
HLA-DOB-207ENST00000447394 LRRIQ1Q96JM4 1722 aa21.41■■□□□ 1.02
HLA-DOB-207ENST00000447394 ARID3CA6NKF2 412 aa21.37■■□□□ 1.01
HLA-DOB-207ENST00000447394 NUP153P49790 1475 aaKnown RBP21.37■■□□□ 1.01
HLA-DOB-207ENST00000447394 FMN1Q68DA7 1419 aa21.36■■□□□ 1.01
HLA-DOB-207ENST00000447394 KDM5BQ9UGL1 1544 aa21.35■■□□□ 1.01
HLA-DOB-207ENST00000447394 HECW1Q76N89 1606 aa21.35■■□□□ 1.01
HLA-DOB-207ENST00000447394 MAPKBP1O60336 1514 aa21.32■■□□□ 1
HLA-DOB-207ENST00000447394 CDK13Q14004 1512 aaKnown RBP21.31■■□□□ 1
HLA-DOB-207ENST00000447394 KIF13AQ9H1H9 1805 aa21.29■■□□□ 1
HLA-DOB-207ENST00000447394 ATP10BO94823 1461 aa21.29■■□□□ 1
HLA-DOB-207ENST00000447394 NPM1P06748 294 aaKnown RBP eCLIP21.28■■□□□ 1
HLA-DOB-207ENST00000447394 ATP1B4Q9UN42 357 aaPredicted RBP21.26■□□□□ 0.99
HLA-DOB-207ENST00000447394 ASXL2Q76L83 1435 aa21.26■□□□□ 0.99
HLA-DOB-207ENST00000447394 CASKIN1Q8WXD9 1431 aa21.26■□□□□ 0.99
HLA-DOB-207ENST00000447394 FYCO1Q9BQS8 1478 aa21.26■□□□□ 0.99
HLA-DOB-207ENST00000447394 EPRSP07814 1512 aaKnown RBP21.24■□□□□ 0.99
HLA-DOB-207ENST00000447394 DIP2BQ9P265 1576 aa21.24■□□□□ 0.99
HLA-DOB-207ENST00000447394 VPS8Q8N3P4 1428 aa21.21■□□□□ 0.99
HLA-DOB-207ENST00000447394 WDR7Q9Y4E6 1490 aa21.2■□□□□ 0.98
HLA-DOB-207ENST00000447394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.18■□□□□ 0.98
HLA-DOB-207ENST00000447394 HNRNPUL2Q1KMD3 747 aaKnown RBP21.18■□□□□ 0.98
HLA-DOB-207ENST00000447394 CFAP43Q8NDM7 1665 aa21.16■□□□□ 0.98
HLA-DOB-207ENST00000447394 ABCC10Q5T3U5 1492 aa21.16■□□□□ 0.98
HLA-DOB-207ENST00000447394 TRHP20396 242 aaPredicted RBP21.16■□□□□ 0.98
HLA-DOB-207ENST00000447394 TSPOAP1O95153 1857 aa21.15■□□□□ 0.98
HLA-DOB-207ENST00000447394 MAGI3Q5TCQ9 1506 aa21.14■□□□□ 0.98
HLA-DOB-207ENST00000447394 CCDC18Q5T9S5 1454 aa21.14■□□□□ 0.98
HLA-DOB-207ENST00000447394 KIF14Q15058 1648 aa21.11■□□□□ 0.97
HLA-DOB-207ENST00000447394 GLI2P10070 1586 aa21.1■□□□□ 0.97
HLA-DOB-207ENST00000447394 MAP3K4Q9Y6R4 1608 aa21.09■□□□□ 0.97
HLA-DOB-207ENST00000447394 FAM69CQ0P6D2 419 aa21.08■□□□□ 0.97
HLA-DOB-207ENST00000447394 KCNH8Q96L42 1107 aa21.08■□□□□ 0.97
HLA-DOB-207ENST00000447394 PPRC1Q5VV67 1664 aaKnown RBP21.08■□□□□ 0.96
HLA-DOB-207ENST00000447394 TIAM1Q13009 1591 aa21.07■□□□□ 0.96
HLA-DOB-207ENST00000447394 TTC37Q6PGP7 1564 aa21.06■□□□□ 0.96
HLA-DOB-207ENST00000447394 ABCA9Q8IUA7 1624 aa21.05■□□□□ 0.96
HLA-DOB-207ENST00000447394 PLEKHD1A6NEE1 506 aa21.03■□□□□ 0.96
HLA-DOB-207ENST00000447394 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.03■□□□□ 0.96
HLA-DOB-207ENST00000447394 TROQ12816 1431 aaPredicted RBP21.02■□□□□ 0.96
HLA-DOB-207ENST00000447394 EHBP1L1Q8N3D4 1523 aa20.99■□□□□ 0.95
HLA-DOB-207ENST00000447394 MYO5CQ9NQX4 1742 aa20.97■□□□□ 0.95
HLA-DOB-207ENST00000447394 CDK11AQ9UQ88 783 aaPredicted RBP20.95■□□□□ 0.94
HLA-DOB-207ENST00000447394 CDC42BPAQ5VT25 1732 aa20.94■□□□□ 0.94
HLA-DOB-207ENST00000447394 MTUS2Q5JR59 1369 aa20.94■□□□□ 0.94
HLA-DOB-207ENST00000447394 CD109Q6YHK3 1445 aa20.94■□□□□ 0.94
HLA-DOB-207ENST00000447394 MAP3K1Q13233 1512 aa20.94■□□□□ 0.94
HLA-DOB-207ENST00000447394 LRRC9Q6ZRR7 1453 aa20.93■□□□□ 0.94
HLA-DOB-207ENST00000447394 SUPT6HQ7KZ85 1726 aaKnown RBP20.92■□□□□ 0.94
HLA-DOB-207ENST00000447394 KANK4Q5T7N3 995 aaPredicted RBP20.91■□□□□ 0.94
HLA-DOB-207ENST00000447394 CDC42BPBQ9Y5S2 1711 aa20.91■□□□□ 0.94
HLA-DOB-207ENST00000447394 PREX2Q70Z35 1606 aa20.89■□□□□ 0.94
HLA-DOB-207ENST00000447394 NCOA2Q15596 1464 aa20.85■□□□□ 0.93
HLA-DOB-207ENST00000447394 TEX14Q8IWB6 1497 aa20.84■□□□□ 0.93
HLA-DOB-207ENST00000447394 APLP2Q06481 763 aa20.83■□□□□ 0.93
HLA-DOB-207ENST00000447394 ITSN2Q9NZM3 1697 aa20.83■□□□□ 0.92
HLA-DOB-207ENST00000447394 ARHGAP5Q13017 1502 aa20.82■□□□□ 0.92
HLA-DOB-207ENST00000447394 KDM6BO15054 1643 aa20.82■□□□□ 0.92
HLA-DOB-207ENST00000447394 CFAP74Q9C0B2 1584 aa20.81■□□□□ 0.92
HLA-DOB-207ENST00000447394 FANCAO15360 1455 aa20.81■□□□□ 0.92
HLA-DOB-207ENST00000447394 PLCH2O75038 1416 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms