RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 DHX57Q6P158 1386 aaKnown RBP15.33■□□□□ 0.04
ZNF550-204ENST00000447310 CCDC136Q96JN2 1154 aa15.31■□□□□ 0.04
ZNF550-204ENST00000447310 RRP7BPQ9NSQ0 103 aa15.31■□□□□ 0.04
ZNF550-204ENST00000447310 EIF4G2P78344 907 aaKnown RBP eCLIP15.31■□□□□ 0.04
ZNF550-204ENST00000447310 RAPGEF2Q9Y4G8 1499 aa15.3■□□□□ 0.04
ZNF550-204ENST00000447310 RAB3GAP2Q9H2M9 1393 aa15.29■□□□□ 0.04
ZNF550-204ENST00000447310 SALL2Q9Y467 1007 aaPredicted RBP15.27■□□□□ 0.04
ZNF550-204ENST00000447310 BCL11AQ9H165 835 aa15.27■□□□□ 0.03
ZNF550-204ENST00000447310 SENP3-EIF4A1A0A087X0R7 540 aa15.26■□□□□ 0.03
ZNF550-204ENST00000447310 ZNF777Q9ULD5 760 aaPredicted RBP15.26■□□□□ 0.03
ZNF550-204ENST00000447310 CCER2I3L3R5 266 aa15.25■□□□□ 0.03
ZNF550-204ENST00000447310 MYT1LQ9UL68 1186 aa15.25■□□□□ 0.03
ZNF550-204ENST00000447310 SETD5Q9C0A6 1442 aa15.24■□□□□ 0.03
ZNF550-204ENST00000447310 TMC1Q8TDI8 760 aa15.23■□□□□ 0.03
ZNF550-204ENST00000447310 ZBTB47Q9UFB7 747 aaPredicted RBP15.23■□□□□ 0.03
ZNF550-204ENST00000447310 TIMELESSQ9UNS1 1208 aa15.22■□□□□ 0.03
ZNF550-204ENST00000447310 FBLN2P98095 1184 aa15.2■□□□□ 0.02
ZNF550-204ENST00000447310 B4GALNT3Q6L9W6 998 aa15.2■□□□□ 0.02
ZNF550-204ENST00000447310 PPP4R2Q9NY27 417 aa15.2■□□□□ 0.02
ZNF550-204ENST00000447310 PPP1R15AO75807 674 aaPredicted RBP15.18■□□□□ 0.02
ZNF550-204ENST00000447310 SMARCA4P51532 1647 aa15.16■□□□□ 0.02
ZNF550-204ENST00000447310 SMARCA2P51531 1590 aa15.16■□□□□ 0.02
ZNF550-204ENST00000447310 SLC4A1APQ9BWU0 796 aaKnown RBP15.15■□□□□ 0.02
ZNF550-204ENST00000447310 CARMIL1Q5VZK9 1371 aa15.15■□□□□ 0.02
ZNF550-204ENST00000447310 CUX2O14529 1486 aa15.13■□□□□ 0.01
ZNF550-204ENST00000447310 FHAD1B1AJZ9 1412 aa15.12■□□□□ 0.01
ZNF550-204ENST00000447310 KDM2AQ9Y2K7 1162 aa15.11■□□□□ 0.01
ZNF550-204ENST00000447310 HSPA5P11021 654 aaKnown RBP15.09■□□□□ 0.01
ZNF550-204ENST00000447310 NOP58Q9Y2X3 529 aaKnown RBP15.06■□□□□ 0
ZNF550-204ENST00000447310 KIF21BO75037 1637 aa15.05■□□□□ 0
ZNF550-204ENST00000447310 ARHGAP35Q9NRY4 1499 aa15.03■□□□□ -0
ZNF550-204ENST00000447310 CANXP27824 592 aaKnown RBP15.02□□□□□ -0.01
ZNF550-204ENST00000447310 FOXD1Q16676 465 aa15.02□□□□□ -0.01
ZNF550-204ENST00000447310 DEKP35659 375 aaKnown RBP15.01□□□□□ -0.01
ZNF550-204ENST00000447310 EIF5BO60841 1220 aaKnown RBP15.01□□□□□ -0.01
ZNF550-204ENST00000447310 ATAD2BQ9ULI0 1458 aa15□□□□□ -0.01
ZNF550-204ENST00000447310 ERICH6BQ5W0A0 696 aa14.97□□□□□ -0.01
ZNF550-204ENST00000447310 LAS1LQ9Y4W2 734 aaKnown RBP14.96□□□□□ -0.02
ZNF550-204ENST00000447310 TSPY4P0CV99 314 aa14.94□□□□□ -0.02
ZNF550-204ENST00000447310 TSPY10P0CW01 314 aa14.94□□□□□ -0.02
ZNF550-204ENST00000447310 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.94□□□□□ -0.02
ZNF550-204ENST00000447310 CARD11Q9BXL7 1154 aa14.94□□□□□ -0.02
ZNF550-204ENST00000447310 FHOD3Q2V2M9 1422 aa14.93□□□□□ -0.02
ZNF550-204ENST00000447310 SYNJ1O43426 1573 aa14.93□□□□□ -0.02
ZNF550-204ENST00000447310 L3MBTL2Q969R5 705 aa14.93□□□□□ -0.02
ZNF550-204ENST00000447310 ARAP1Q96P48 1450 aa14.92□□□□□ -0.02
ZNF550-204ENST00000447310 RTN4Q9NQC3 1192 aaKnown RBP14.92□□□□□ -0.02
ZNF550-204ENST00000447310 MPHOSPH9Q99550 1183 aa14.91□□□□□ -0.02
ZNF550-204ENST00000447310 RGL3Q3MIN7 710 aa14.9□□□□□ -0.02
ZNF550-204ENST00000447310 NEFMP07197 916 aa14.9□□□□□ -0.02
ZNF550-204ENST00000447310 CFDP1Q9UEE9 299 aaPredicted RBP14.9□□□□□ -0.02
ZNF550-204ENST00000447310 RRBP1Q9P2E9 1410 aaKnown RBP14.89□□□□□ -0.03
ZNF550-204ENST00000447310 WDR43Q15061 677 aaKnown RBP eCLIP14.89□□□□□ -0.03
ZNF550-204ENST00000447310 PHLDB1Q86UU1 1377 aa14.89□□□□□ -0.03
ZNF550-204ENST00000447310 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.87□□□□□ -0.03
ZNF550-204ENST00000447310 FMN1Q68DA7 1419 aa14.86□□□□□ -0.03
ZNF550-204ENST00000447310 FANCIQ9NVI1 1328 aa14.86□□□□□ -0.03
ZNF550-204ENST00000447310 PRKRIP1Q9H875 184 aaPredicted RBP14.85□□□□□ -0.03
ZNF550-204ENST00000447310 DDRGK1Q96HY6 314 aa14.84□□□□□ -0.03
ZNF550-204ENST00000447310 IGF1RP08069 1367 aa14.84□□□□□ -0.03
ZNF550-204ENST00000447310 PPM1GO15355 546 aaPredicted RBP14.83□□□□□ -0.03
ZNF550-204ENST00000447310 ARXQ96QS3 562 aa14.83□□□□□ -0.03
ZNF550-204ENST00000447310 NUDCQ9Y266 331 aa14.81□□□□□ -0.04
ZNF550-204ENST00000447310 UPF2Q9HAU5 1272 aaKnown RBP14.8□□□□□ -0.04
ZNF550-204ENST00000447310 CCDC18Q5T9S5 1454 aa14.8□□□□□ -0.04
ZNF550-204ENST00000447310 CC2D1BQ5T0F9 858 aaKnown RBP14.79□□□□□ -0.04
ZNF550-204ENST00000447310 IPO9Q96P70 1041 aaKnown RBP14.79□□□□□ -0.04
ZNF550-204ENST00000447310 PRXQ9BXM0 1461 aa14.79□□□□□ -0.04
ZNF550-204ENST00000447310 TDRD9Q8NDG6 1382 aaKnown RBP14.79□□□□□ -0.04
ZNF550-204ENST00000447310 DCAF11Q8TEB1 546 aa14.79□□□□□ -0.04
ZNF550-204ENST00000447310 LRRC9Q6ZRR7 1453 aa14.79□□□□□ -0.04
ZNF550-204ENST00000447310 PKD2Q13563 968 aa14.78□□□□□ -0.04
ZNF550-204ENST00000447310 EIF4G1Q04637 1599 aaKnown RBP14.78□□□□□ -0.04
ZNF550-204ENST00000447310 RGS3P49796 1198 aa14.78□□□□□ -0.04
ZNF550-204ENST00000447310 ZBED9Q6R2W3 1325 aa14.77□□□□□ -0.04
ZNF550-204ENST00000447310 PLEKHD1A6NEE1 506 aa14.77□□□□□ -0.04
ZNF550-204ENST00000447310 CHMP7Q8WUX9 453 aaPredicted RBP14.77□□□□□ -0.04
ZNF550-204ENST00000447310 ERICH3Q5RHP9 1530 aa14.76□□□□□ -0.05
ZNF550-204ENST00000447310 WASHC2AQ641Q2 1341 aa14.76□□□□□ -0.05
ZNF550-204ENST00000447310 WDR97A6NE52 1622 aa14.75□□□□□ -0.05
ZNF550-204ENST00000447310 RCAN3Q9UKA8 241 aa14.75□□□□□ -0.05
ZNF550-204ENST00000447310 CADPSQ9ULU8 1353 aa14.75□□□□□ -0.05
ZNF550-204ENST00000447310 CHGAP10645 457 aaKnown RBP14.72□□□□□ -0.05
ZNF550-204ENST00000447310 KNSTRNQ9Y448 316 aa14.72□□□□□ -0.05
ZNF550-204ENST00000447310 FGD6Q6ZV73 1430 aa14.72□□□□□ -0.05
ZNF550-204ENST00000447310 TCERG1O14776 1098 aaKnown RBP14.71□□□□□ -0.05
ZNF550-204ENST00000447310 UACAQ9BZF9 1416 aa14.71□□□□□ -0.06
ZNF550-204ENST00000447310 CCDC184Q52MB2 194 aa14.69□□□□□ -0.06
ZNF550-204ENST00000447310 MSH5O43196 834 aa14.68□□□□□ -0.06
ZNF550-204ENST00000447310 HSP90AA1P07900 732 aaKnown RBP14.68□□□□□ -0.06
ZNF550-204ENST00000447310 CCDC7Q96M83 1385 aa14.67□□□□□ -0.06
ZNF550-204ENST00000447310 TOP2BQ02880 1626 aa14.67□□□□□ -0.06
ZNF550-204ENST00000447310 BECN1Q14457 450 aa14.66□□□□□ -0.06
ZNF550-204ENST00000447310 RALBP1Q15311 655 aa14.66□□□□□ -0.06
ZNF550-204ENST00000447310 KIF7Q2M1P5 1343 aa14.65□□□□□ -0.06
ZNF550-204ENST00000447310 FGD5Q6ZNL6 1462 aa14.65□□□□□ -0.06
ZNF550-204ENST00000447310 NEUROD2Q15784 382 aa14.65□□□□□ -0.06
ZNF550-204ENST00000447310 EXOC6Q8TAG9 804 aa14.65□□□□□ -0.06
ZNF550-204ENST00000447310 KTN1Q86UP2 1357 aaKnown RBP14.64□□□□□ -0.07
ZNF550-204ENST00000447310 CNTLNQ9NXG0 1405 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms