RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 SNAPC4Q5SXM2 1469 aa17.41■□□□□ 0.38
GNE-203ENST00000447283 MAGI1Q96QZ7 1491 aaPredicted RBP17.39■□□□□ 0.37
GNE-203ENST00000447283 PELP1Q8IZL8 1130 aaKnown RBP17.39■□□□□ 0.37
GNE-203ENST00000447283 ADAMTS12P58397 1594 aa17.38■□□□□ 0.37
GNE-203ENST00000447283 RANGAP1P46060 587 aaPredicted RBP17.36■□□□□ 0.37
GNE-203ENST00000447283 CHMP7Q8WUX9 453 aaPredicted RBP17.36■□□□□ 0.37
GNE-203ENST00000447283 FBLN2P98095 1184 aa17.34■□□□□ 0.37
GNE-203ENST00000447283 CLIP1P30622 1438 aa17.33■□□□□ 0.37
GNE-203ENST00000447283 SYNJ2O15056 1496 aa17.33■□□□□ 0.36
GNE-203ENST00000447283 GRIN2AQ12879 1464 aa17.29■□□□□ 0.36
GNE-203ENST00000447283 ACIN1Q9UKV3 1341 aaKnown RBP17.24■□□□□ 0.35
GNE-203ENST00000447283 DIEXFQ68CQ4 756 aaKnown RBP17.23■□□□□ 0.35
GNE-203ENST00000447283 CTTNBP2Q8WZ74 1663 aa17.23■□□□□ 0.35
GNE-203ENST00000447283 TTBK1Q5TCY1 1321 aaPredicted RBP17.2■□□□□ 0.34
GNE-203ENST00000447283 ARHGAP35Q9NRY4 1499 aa17.2■□□□□ 0.34
GNE-203ENST00000447283 KIAA0586Q9BVV6 1533 aa17.2■□□□□ 0.34
GNE-203ENST00000447283 NUP160Q12769 1436 aa17.18■□□□□ 0.34
GNE-203ENST00000447283 IQGAP2Q13576 1575 aa17.17■□□□□ 0.34
GNE-203ENST00000447283 P3H3Q8IVL6 736 aa17.16■□□□□ 0.34
GNE-203ENST00000447283 CEP170Q5SW79 1584 aa17.16■□□□□ 0.34
GNE-203ENST00000447283 NEUROD1Q13562 356 aa17.16■□□□□ 0.34
GNE-203ENST00000447283 ARAP1Q96P48 1450 aa17.16■□□□□ 0.34
GNE-203ENST00000447283 VPS8Q8N3P4 1428 aa17.15■□□□□ 0.34
GNE-203ENST00000447283 EFCAB5A4FU69 1503 aa17.14■□□□□ 0.33
GNE-203ENST00000447283 CENPBP07199 599 aaPredicted RBP17.12■□□□□ 0.33
GNE-203ENST00000447283 CHD1O14646 1710 aa17.12■□□□□ 0.33
GNE-203ENST00000447283 JPH4Q96JJ6 628 aa17.12■□□□□ 0.33
GNE-203ENST00000447283 UGGT2Q9NYU1 1516 aa17.09■□□□□ 0.33
GNE-203ENST00000447283 FHOD3Q2V2M9 1422 aa17.09■□□□□ 0.33
GNE-203ENST00000447283 ZNF316A6NFI3 1004 aaPredicted RBP17.09■□□□□ 0.33
GNE-203ENST00000447283 SAMD9Q5K651 1589 aa17.08■□□□□ 0.32
GNE-203ENST00000447283 APLP2Q06481 763 aa17.05■□□□□ 0.32
GNE-203ENST00000447283 FMN1Q68DA7 1419 aa17.03■□□□□ 0.32
GNE-203ENST00000447283 DISP1Q96F81 1524 aa17.03■□□□□ 0.32
GNE-203ENST00000447283 CARMIL2Q6F5E8 1435 aa17.02■□□□□ 0.32
GNE-203ENST00000447283 OSCARQ8IYS5 282 aa17.01■□□□□ 0.31
GNE-203ENST00000447283 GTF3C3Q9Y5Q9 886 aa16.99■□□□□ 0.31
GNE-203ENST00000447283 KIAA0556O60303 1618 aa16.99■□□□□ 0.31
GNE-203ENST00000447283 ATP1B4Q9UN42 357 aaPredicted RBP16.98■□□□□ 0.31
GNE-203ENST00000447283 PRG4Q92954 1404 aaPredicted RBP16.98■□□□□ 0.31
GNE-203ENST00000447283 HNRNPUL2Q1KMD3 747 aaKnown RBP16.96■□□□□ 0.31
GNE-203ENST00000447283 CLASP1Q7Z460 1538 aa16.96■□□□□ 0.31
GNE-203ENST00000447283 CASKIN1Q8WXD9 1431 aa16.96■□□□□ 0.31
GNE-203ENST00000447283 SHROOM2Q13796 1616 aa16.93■□□□□ 0.3
GNE-203ENST00000447283 FYCO1Q9BQS8 1478 aa16.92■□□□□ 0.3
GNE-203ENST00000447283 PCF11O94913 1555 aaKnown RBP16.91■□□□□ 0.3
GNE-203ENST00000447283 PTPRGP23470 1445 aa16.88■□□□□ 0.29
GNE-203ENST00000447283 KANK4Q5T7N3 995 aaPredicted RBP16.88■□□□□ 0.29
GNE-203ENST00000447283 MAP3K1Q13233 1512 aa16.87■□□□□ 0.29
GNE-203ENST00000447283 CLSPNQ9HAW4 1339 aa16.85■□□□□ 0.29
GNE-203ENST00000447283 TIAM1Q13009 1591 aa16.83■□□□□ 0.29
GNE-203ENST00000447283 ERCC6L2Q5T890 1561 aa16.83■□□□□ 0.28
GNE-203ENST00000447283 MIER1Q8N108 512 aa16.82■□□□□ 0.28
GNE-203ENST00000447283 PLB1Q6P1J6 1458 aa16.82■□□□□ 0.28
GNE-203ENST00000447283 HECW1Q76N89 1606 aa16.82■□□□□ 0.28
GNE-203ENST00000447283 RAPGEF6Q8TEU7 1601 aa16.8■□□□□ 0.28
GNE-203ENST00000447283 CCDC18Q5T9S5 1454 aa16.8■□□□□ 0.28
GNE-203ENST00000447283 LRRC9Q6ZRR7 1453 aa16.79■□□□□ 0.28
GNE-203ENST00000447283 EPRSP07814 1512 aaKnown RBP16.79■□□□□ 0.28
GNE-203ENST00000447283 ARID3CA6NKF2 412 aa16.79■□□□□ 0.28
GNE-203ENST00000447283 SLC24A1O60721 1099 aa16.79■□□□□ 0.28
GNE-203ENST00000447283 NUP153P49790 1475 aaKnown RBP16.78■□□□□ 0.28
GNE-203ENST00000447283 CFAP43Q8NDM7 1665 aa16.76■□□□□ 0.27
GNE-203ENST00000447283 DHX57Q6P158 1386 aaKnown RBP16.76■□□□□ 0.27
GNE-203ENST00000447283 ABCA8O94911 1581 aa16.76■□□□□ 0.27
GNE-203ENST00000447283 UACAQ9BZF9 1416 aa16.76■□□□□ 0.27
GNE-203ENST00000447283 MTUS2Q5JR59 1369 aa16.75■□□□□ 0.27
GNE-203ENST00000447283 CDK11AQ9UQ88 783 aaPredicted RBP16.75■□□□□ 0.27
GNE-203ENST00000447283 RRBP1Q9P2E9 1410 aaKnown RBP16.75■□□□□ 0.27
GNE-203ENST00000447283 LRRIQ1Q96JM4 1722 aa16.74■□□□□ 0.27
GNE-203ENST00000447283 YTHDC1Q96MU7 727 aaKnown RBP16.74■□□□□ 0.27
GNE-203ENST00000447283 CDK13Q14004 1512 aaKnown RBP16.73■□□□□ 0.27
GNE-203ENST00000447283 ATP10BO94823 1461 aa16.69■□□□□ 0.26
GNE-203ENST00000447283 ABCC2Q92887 1545 aa16.67■□□□□ 0.26
GNE-203ENST00000447283 PLEKHD1A6NEE1 506 aa16.67■□□□□ 0.26
GNE-203ENST00000447283 EHBP1L1Q8N3D4 1523 aa16.66■□□□□ 0.26
GNE-203ENST00000447283 UHRF1BP1LA0JNW5 1464 aa16.66■□□□□ 0.26
GNE-203ENST00000447283 MAGI3Q5TCQ9 1506 aa16.66■□□□□ 0.26
GNE-203ENST00000447283 ARHGEF11O15085 1522 aa16.63■□□□□ 0.25
GNE-203ENST00000447283 PHLDB1Q86UU1 1377 aa16.63■□□□□ 0.25
GNE-203ENST00000447283 CCNB3Q8WWL7 1395 aa16.62■□□□□ 0.25
GNE-203ENST00000447283 TROQ12816 1431 aaPredicted RBP16.62■□□□□ 0.25
GNE-203ENST00000447283 NCOA2Q15596 1464 aa16.62■□□□□ 0.25
GNE-203ENST00000447283 SUPT6HQ7KZ85 1726 aaKnown RBP16.6■□□□□ 0.25
GNE-203ENST00000447283 KDM5BQ9UGL1 1544 aa16.6■□□□□ 0.25
GNE-203ENST00000447283 MYT1Q01538 1121 aa16.57■□□□□ 0.24
GNE-203ENST00000447283 NPM1P06748 294 aaKnown RBP eCLIP16.57■□□□□ 0.24
GNE-203ENST00000447283 CYB5RLQ6IPT4 315 aa16.57■□□□□ 0.24
GNE-203ENST00000447283 ADCY10Q96PN6 1610 aa16.56■□□□□ 0.24
GNE-203ENST00000447283 MYOM3Q5VTT5 1437 aa16.55■□□□□ 0.24
GNE-203ENST00000447283 RIMBP3CA6NJZ7 1639 aa16.54■□□□□ 0.24
GNE-203ENST00000447283 RIMBP3BA6NNM3 1639 aa16.54■□□□□ 0.24
GNE-203ENST00000447283 RIMBP3Q9UFD9 1639 aa16.54■□□□□ 0.24
GNE-203ENST00000447283 FAM50AQ14320 339 aaKnown RBP16.53■□□□□ 0.24
GNE-203ENST00000447283 ZCCHC11Q5TAX3 1644 aaKnown RBP16.53■□□□□ 0.24
GNE-203ENST00000447283 FGD6Q6ZV73 1430 aa16.52■□□□□ 0.24
GNE-203ENST00000447283 KCNH8Q96L42 1107 aa16.51■□□□□ 0.23
GNE-203ENST00000447283 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.49■□□□□ 0.23
GNE-203ENST00000447283 MIA2Q96PC5 1412 aa16.49■□□□□ 0.23
GNE-203ENST00000447283 KIF14Q15058 1648 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms