RNA–Protein interactions for RNA: ENST00000447275.7

PDE4C-203, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-203ENST00000447275 CUL7Q14999 1698 aa17.03■□□□□ 0.32
PDE4C-203ENST00000447275 ABCA5Q8WWZ7 1642 aa17.02■□□□□ 0.32
PDE4C-203ENST00000447275 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.31
PDE4C-203ENST00000447275 APLP2Q06481 763 aa17.01■□□□□ 0.31
PDE4C-203ENST00000447275 TARBP1Q13395 1621 aaKnown RBP16.98■□□□□ 0.31
PDE4C-203ENST00000447275 HNRNPUL2Q1KMD3 747 aaKnown RBP16.96■□□□□ 0.31
PDE4C-203ENST00000447275 GAPVD1Q14C86 1478 aa16.94■□□□□ 0.3
PDE4C-203ENST00000447275 MRC2Q9UBG0 1479 aa16.94■□□□□ 0.3
PDE4C-203ENST00000447275 CTTNBP2Q8WZ74 1663 aa16.93■□□□□ 0.3
PDE4C-203ENST00000447275 KANK4Q5T7N3 995 aaPredicted RBP16.92■□□□□ 0.3
PDE4C-203ENST00000447275 P3H3Q8IVL6 736 aa16.88■□□□□ 0.29
PDE4C-203ENST00000447275 CLSPNQ9HAW4 1339 aa16.86■□□□□ 0.29
PDE4C-203ENST00000447275 PBRM1Q86U86 1689 aa16.85■□□□□ 0.29
PDE4C-203ENST00000447275 AQRO60306 1485 aaKnown RBP eCLIP16.84■□□□□ 0.293e-6■■■■□ 24.7
PDE4C-203ENST00000447275 EFCAB5A4FU69 1503 aa16.84■□□□□ 0.29
PDE4C-203ENST00000447275 WDR62O43379 1518 aa16.84■□□□□ 0.29
PDE4C-203ENST00000447275 MAP3K1Q13233 1512 aa16.84■□□□□ 0.29
PDE4C-203ENST00000447275 SUPT16HQ9Y5B9 1047 aaKnown RBP16.84■□□□□ 0.29
PDE4C-203ENST00000447275 FHOD3Q2V2M9 1422 aa16.82■□□□□ 0.28
PDE4C-203ENST00000447275 TIAM1Q13009 1591 aa16.81■□□□□ 0.28
PDE4C-203ENST00000447275 ERCC6Q03468 1493 aa16.8■□□□□ 0.28
PDE4C-203ENST00000447275 FHAD1B1AJZ9 1412 aa16.79■□□□□ 0.28
PDE4C-203ENST00000447275 ZNF608Q9ULD9 1512 aaPredicted RBP16.79■□□□□ 0.28
PDE4C-203ENST00000447275 PCF11O94913 1555 aaKnown RBP16.78■□□□□ 0.28
PDE4C-203ENST00000447275 CFAP43Q8NDM7 1665 aa16.77■□□□□ 0.28
PDE4C-203ENST00000447275 SAMD9Q5K651 1589 aa16.77■□□□□ 0.27
PDE4C-203ENST00000447275 RRBP1Q9P2E9 1410 aaKnown RBP16.76■□□□□ 0.27
PDE4C-203ENST00000447275 IFT140Q96RY7 1462 aa16.76■□□□□ 0.27
PDE4C-203ENST00000447275 ADAMTS12P58397 1594 aa16.76■□□□□ 0.27
PDE4C-203ENST00000447275 THOC2Q8NI27 1593 aaKnown RBP16.74■□□□□ 0.27
PDE4C-203ENST00000447275 ATP1B4Q9UN42 357 aaPredicted RBP16.73■□□□□ 0.27
PDE4C-203ENST00000447275 GRIN2BQ13224 1484 aa16.73■□□□□ 0.27
PDE4C-203ENST00000447275 FYCO1Q9BQS8 1478 aa16.73■□□□□ 0.27
PDE4C-203ENST00000447275 TSHZ2Q9NRE2 1034 aa16.71■□□□□ 0.27
PDE4C-203ENST00000447275 LRRC9Q6ZRR7 1453 aa16.71■□□□□ 0.27
PDE4C-203ENST00000447275 CASKIN1Q8WXD9 1431 aa16.7■□□□□ 0.26
PDE4C-203ENST00000447275 DHX57Q6P158 1386 aaKnown RBP16.69■□□□□ 0.26
PDE4C-203ENST00000447275 SNAPC4Q5SXM2 1469 aa16.68■□□□□ 0.26
PDE4C-203ENST00000447275 FMN1Q68DA7 1419 aa16.67■□□□□ 0.26
PDE4C-203ENST00000447275 EIF4G3O43432 1585 aaKnown RBP16.67■□□□□ 0.26
PDE4C-203ENST00000447275 PRKCSHP14314 528 aaPredicted RBP16.67■□□□□ 0.26
PDE4C-203ENST00000447275 ANP32EQ9BTT0 268 aa16.66■□□□□ 0.26
PDE4C-203ENST00000447275 CCNB3Q8WWL7 1395 aa16.65■□□□□ 0.26
PDE4C-203ENST00000447275 LRRIQ1Q96JM4 1722 aa16.65■□□□□ 0.26
PDE4C-203ENST00000447275 IQGAP2Q13576 1575 aa16.64■□□□□ 0.25
PDE4C-203ENST00000447275 PHLDB1Q86UU1 1377 aa16.62■□□□□ 0.25
PDE4C-203ENST00000447275 ITGAEP38570 1179 aa16.59■□□□□ 0.25
PDE4C-203ENST00000447275 UGGT2Q9NYU1 1516 aa16.56■□□□□ 0.24
PDE4C-203ENST00000447275 GRIN2AQ12879 1464 aa16.56■□□□□ 0.24
PDE4C-203ENST00000447275 MAGI1Q96QZ7 1491 aaPredicted RBP16.54■□□□□ 0.24
PDE4C-203ENST00000447275 KIAA0586Q9BVV6 1533 aa16.53■□□□□ 0.24
PDE4C-203ENST00000447275 FAM50AQ14320 339 aaKnown RBP16.51■□□□□ 0.23
PDE4C-203ENST00000447275 KCNH8Q96L42 1107 aa16.5■□□□□ 0.23
PDE4C-203ENST00000447275 MTUS2Q5JR59 1369 aa16.5■□□□□ 0.23
PDE4C-203ENST00000447275 FBLN2P98095 1184 aa16.49■□□□□ 0.23
PDE4C-203ENST00000447275 CHMP7Q8WUX9 453 aaPredicted RBP16.49■□□□□ 0.23
PDE4C-203ENST00000447275 SYNJ2O15056 1496 aa16.49■□□□□ 0.23
PDE4C-203ENST00000447275 HECW1Q76N89 1606 aa16.48■□□□□ 0.23
PDE4C-203ENST00000447275 CEP170Q5SW79 1584 aa16.48■□□□□ 0.23
PDE4C-203ENST00000447275 ERICH6Q7L0X2 663 aa16.48■□□□□ 0.23
PDE4C-203ENST00000447275 KIAA0556O60303 1618 aa16.47■□□□□ 0.23
PDE4C-203ENST00000447275 DISP1Q96F81 1524 aa16.47■□□□□ 0.23
PDE4C-203ENST00000447275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.47■□□□□ 0.23
PDE4C-203ENST00000447275 CCDC18Q5T9S5 1454 aa16.46■□□□□ 0.23
PDE4C-203ENST00000447275 BCL11AQ9H165 835 aa16.46■□□□□ 0.23
PDE4C-203ENST00000447275 MAGI3Q5TCQ9 1506 aa16.46■□□□□ 0.23
PDE4C-203ENST00000447275 EHBP1L1Q8N3D4 1523 aa16.46■□□□□ 0.23
PDE4C-203ENST00000447275 SUPT6HQ7KZ85 1726 aaKnown RBP16.45■□□□□ 0.22
PDE4C-203ENST00000447275 ARID3CA6NKF2 412 aa16.45■□□□□ 0.22
PDE4C-203ENST00000447275 ARHGEF11O15085 1522 aa16.44■□□□□ 0.22
PDE4C-203ENST00000447275 FGD6Q6ZV73 1430 aa16.43■□□□□ 0.22
PDE4C-203ENST00000447275 NCOA2Q15596 1464 aa16.43■□□□□ 0.22
PDE4C-203ENST00000447275 CDK13Q14004 1512 aaKnown RBP16.43■□□□□ 0.22
PDE4C-203ENST00000447275 BCANQ96GW7 911 aa16.43■□□□□ 0.22
PDE4C-203ENST00000447275 EPRSP07814 1512 aaKnown RBP16.42■□□□□ 0.22
PDE4C-203ENST00000447275 RAB3GAP2Q9H2M9 1393 aa16.42■□□□□ 0.22
PDE4C-203ENST00000447275 NUP160Q12769 1436 aa16.41■□□□□ 0.22
PDE4C-203ENST00000447275 FKBP8Q14318 412 aa16.41■□□□□ 0.22
PDE4C-203ENST00000447275 MYOM3Q5VTT5 1437 aa16.38■□□□□ 0.21
PDE4C-203ENST00000447275 SETD5Q9C0A6 1442 aa16.38■□□□□ 0.21
PDE4C-203ENST00000447275 RAPGEF6Q8TEU7 1601 aa16.35■□□□□ 0.21
PDE4C-203ENST00000447275 NUP153P49790 1475 aaKnown RBP16.34■□□□□ 0.21
PDE4C-203ENST00000447275 JPH4Q96JJ6 628 aa16.34■□□□□ 0.21
PDE4C-203ENST00000447275 RBM19Q9Y4C8 960 aaKnown RBP16.34■□□□□ 0.21
PDE4C-203ENST00000447275 MAPKBP1O60336 1514 aa16.33■□□□□ 0.21
PDE4C-203ENST00000447275 PTPRKQ15262 1439 aa16.33■□□□□ 0.2
PDE4C-203ENST00000447275 PTPN23Q9H3S7 1636 aa16.33■□□□□ 0.2
PDE4C-203ENST00000447275 DDX10Q13206 875 aaKnown RBP16.31■□□□□ 0.2
PDE4C-203ENST00000447275 PLB1Q6P1J6 1458 aa16.31■□□□□ 0.2
PDE4C-203ENST00000447275 TCOF1Q13428 1488 aaKnown RBP16.29■□□□□ 0.2
PDE4C-203ENST00000447275 CARMIL2Q6F5E8 1435 aa16.28■□□□□ 0.2
PDE4C-203ENST00000447275 NEFLP07196 543 aa16.27■□□□□ 0.2
PDE4C-203ENST00000447275 PPP1R15AO75807 674 aaPredicted RBP16.26■□□□□ 0.19
PDE4C-203ENST00000447275 HFM1A2PYH4 1435 aa16.26■□□□□ 0.19
PDE4C-203ENST00000447275 CHD1O14646 1710 aa16.26■□□□□ 0.19
PDE4C-203ENST00000447275 MIA2Q96PC5 1412 aa16.25■□□□□ 0.19
PDE4C-203ENST00000447275 PRG4Q92954 1404 aaPredicted RBP16.22■□□□□ 0.19
PDE4C-203ENST00000447275 CCER2I3L3R5 266 aa16.22■□□□□ 0.19
PDE4C-203ENST00000447275 NAIPQ13075 1403 aa16.21■□□□□ 0.19
PDE4C-203ENST00000447275 ABCA8O94911 1581 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms