RNA–Protein interactions for RNA: ENST00000446916.2

ATRN-202, Transcript of attractin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATRN, Length 3,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRN-202ENST00000446916 RAPGEF2Q9Y4G8 1499 aa20.61■□□□□ 0.89
ATRN-202ENST00000446916 MTUS2Q5JR59 1369 aa20.59■□□□□ 0.89
ATRN-202ENST00000446916 CDK11AQ9UQ88 783 aaPredicted RBP20.57■□□□□ 0.88
ATRN-202ENST00000446916 RAD54L2Q9Y4B4 1467 aa20.55■□□□□ 0.88
ATRN-202ENST00000446916 NBR1Q14596 966 aa20.52■□□□□ 0.88
ATRN-202ENST00000446916 KANK4Q5T7N3 995 aaPredicted RBP20.52■□□□□ 0.88
ATRN-202ENST00000446916 KCNH8Q96L42 1107 aa20.51■□□□□ 0.87
ATRN-202ENST00000446916 RTN4Q9NQC3 1192 aaKnown RBP20.51■□□□□ 0.87
ATRN-202ENST00000446916 ZNF326Q5BKZ1 582 aaKnown RBP20.5■□□□□ 0.87
ATRN-202ENST00000446916 FGD5Q6ZNL6 1462 aa20.49■□□□□ 0.87
ATRN-202ENST00000446916 CFTRP13569 1480 aa20.48■□□□□ 0.87
ATRN-202ENST00000446916 IRX6P78412 446 aaPredicted RBP20.47■□□□□ 0.87
ATRN-202ENST00000446916 SYNJ1O43426 1573 aa20.47■□□□□ 0.87
ATRN-202ENST00000446916 CCDC136Q96JN2 1154 aa20.45■□□□□ 0.86
ATRN-202ENST00000446916 RRP7BPQ9NSQ0 103 aa20.42■□□□□ 0.86
ATRN-202ENST00000446916 HMGXB3Q12766 1538 aa20.4■□□□□ 0.86
ATRN-202ENST00000446916 IGF1RP08069 1367 aa20.4■□□□□ 0.86
ATRN-202ENST00000446916 EIF5BO60841 1220 aaKnown RBP20.38■□□□□ 0.85
ATRN-202ENST00000446916 RBM19Q9Y4C8 960 aaKnown RBP20.37■□□□□ 0.85
ATRN-202ENST00000446916 VPS8Q8N3P4 1428 aa20.37■□□□□ 0.85
ATRN-202ENST00000446916 NPM1P06748 294 aaKnown RBP eCLIP20.35■□□□□ 0.85
ATRN-202ENST00000446916 FHOD3Q2V2M9 1422 aa20.35■□□□□ 0.85
ATRN-202ENST00000446916 AQRO60306 1485 aaKnown RBP eCLIP20.34■□□□□ 0.852e-6■■■□□ 16.9
ATRN-202ENST00000446916 ANO8Q9HCE9 1232 aaPredicted RBP20.34■□□□□ 0.85
ATRN-202ENST00000446916 PLEKHD1A6NEE1 506 aa20.33■□□□□ 0.84
ATRN-202ENST00000446916 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.32■□□□□ 0.84
ATRN-202ENST00000446916 CUX1P39880 1505 aa20.31■□□□□ 0.84
ATRN-202ENST00000446916 RTL5Q5HYW3 569 aaPredicted RBP20.3■□□□□ 0.84
ATRN-202ENST00000446916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.3■□□□□ 0.842e-7■■□□□ 12
ATRN-202ENST00000446916 HIRIP3Q9BW71 556 aaPredicted RBP20.28■□□□□ 0.84
ATRN-202ENST00000446916 PEG3Q9GZU2 1588 aa20.24■□□□□ 0.83
ATRN-202ENST00000446916 CFDP1Q9UEE9 299 aaPredicted RBP20.24■□□□□ 0.83
ATRN-202ENST00000446916 GAPVD1Q14C86 1478 aa20.23■□□□□ 0.83
ATRN-202ENST00000446916 SENP3-EIF4A1A0A087X0R7 540 aa20.21■□□□□ 0.83
ATRN-202ENST00000446916 FHAD1B1AJZ9 1412 aa20.21■□□□□ 0.83
ATRN-202ENST00000446916 TSPY4P0CV99 314 aa20.21■□□□□ 0.83
ATRN-202ENST00000446916 TSPY10P0CW01 314 aa20.21■□□□□ 0.83
ATRN-202ENST00000446916 DEKP35659 375 aaKnown RBP20.21■□□□□ 0.83
ATRN-202ENST00000446916 JPH4Q96JJ6 628 aa20.21■□□□□ 0.83
ATRN-202ENST00000446916 TOPBP1Q92547 1522 aa20.18■□□□□ 0.82
ATRN-202ENST00000446916 DDX10Q13206 875 aaKnown RBP20.18■□□□□ 0.82
ATRN-202ENST00000446916 POLA1P09884 1462 aaPredicted RBP20.18■□□□□ 0.82
ATRN-202ENST00000446916 CCNB3Q8WWL7 1395 aa20.16■□□□□ 0.82
ATRN-202ENST00000446916 PLPPR3Q6T4P5 718 aa20.16■□□□□ 0.82
ATRN-202ENST00000446916 NPM2Q86SE8 214 aaKnown RBP20.15■□□□□ 0.82
ATRN-202ENST00000446916 TOP2BQ02880 1626 aa20.13■□□□□ 0.81
ATRN-202ENST00000446916 SENP3Q9H4L4 574 aaPredicted RBP20.12■□□□□ 0.81
ATRN-202ENST00000446916 SIN3AQ96ST3 1273 aa20.11■□□□□ 0.81
ATRN-202ENST00000446916 SLC4A1APQ9BWU0 796 aaKnown RBP20.11■□□□□ 0.81
ATRN-202ENST00000446916 TONSLQ96HA7 1378 aa20.09■□□□□ 0.81
ATRN-202ENST00000446916 CHGAP10645 457 aaKnown RBP20.07■□□□□ 0.8
ATRN-202ENST00000446916 DAXXQ9UER7 740 aaPredicted RBP20.05■□□□□ 0.8
ATRN-202ENST00000446916 KDM2AQ9Y2K7 1162 aa20.05■□□□□ 0.8
ATRN-202ENST00000446916 FMN1Q68DA7 1419 aa20.04■□□□□ 0.8
ATRN-202ENST00000446916 SALL2Q9Y467 1007 aaPredicted RBP20.03■□□□□ 0.8
ATRN-202ENST00000446916 CARMIL2Q6F5E8 1435 aa20.02■□□□□ 0.79
ATRN-202ENST00000446916 PRXQ9BXM0 1461 aa20.01■□□□□ 0.79
ATRN-202ENST00000446916 MRC2Q9UBG0 1479 aa20.01■□□□□ 0.79
ATRN-202ENST00000446916 ARAP1Q96P48 1450 aa20■□□□□ 0.79
ATRN-202ENST00000446916 ANP32CO43423 234 aa19.98■□□□□ 0.79
ATRN-202ENST00000446916 FOXD1Q16676 465 aa19.98■□□□□ 0.79
ATRN-202ENST00000446916 KIF21BO75037 1637 aa19.97■□□□□ 0.79
ATRN-202ENST00000446916 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
ATRN-202ENST00000446916 MSH5O43196 834 aa19.96■□□□□ 0.79
ATRN-202ENST00000446916 RGL3Q3MIN7 710 aa19.95■□□□□ 0.78
ATRN-202ENST00000446916 ARHGAP35Q9NRY4 1499 aa19.95■□□□□ 0.78
ATRN-202ENST00000446916 HNRNPUQ00839 825 aaKnown RBP eCLIP19.95■□□□□ 0.78
ATRN-202ENST00000446916 DNMBPQ6XZF7 1577 aa19.95■□□□□ 0.78
ATRN-202ENST00000446916 CLSPNQ9HAW4 1339 aa19.94■□□□□ 0.78
ATRN-202ENST00000446916 LAMC3Q9Y6N6 1575 aa19.92■□□□□ 0.78
ATRN-202ENST00000446916 GRIN2BQ13224 1484 aa19.91■□□□□ 0.78
ATRN-202ENST00000446916 ARXQ96QS3 562 aa19.88■□□□□ 0.77
ATRN-202ENST00000446916 ZNF608Q9ULD9 1512 aaPredicted RBP19.88■□□□□ 0.77
ATRN-202ENST00000446916 HNRNPMP52272 730 aaKnown RBP eCLIP19.87■□□□□ 0.772e-6■■■■□ 22
ATRN-202ENST00000446916 RAB3GAP2Q9H2M9 1393 aa19.86■□□□□ 0.77
ATRN-202ENST00000446916 PTPRGP23470 1445 aa19.85■□□□□ 0.77
ATRN-202ENST00000446916 CYB5RLQ6IPT4 315 aa19.85■□□□□ 0.77
ATRN-202ENST00000446916 SNAPC4Q5SXM2 1469 aa19.84■□□□□ 0.77
ATRN-202ENST00000446916 ZNF644Q9H582 1327 aaPredicted RBP19.84■□□□□ 0.77
ATRN-202ENST00000446916 FAM9BQ8IZU0 186 aa19.83■□□□□ 0.76
ATRN-202ENST00000446916 ESF1Q9H501 851 aaKnown RBP19.83■□□□□ 0.76
ATRN-202ENST00000446916 ABCA10Q8WWZ4 1543 aa19.83■□□□□ 0.76
ATRN-202ENST00000446916 IFT140Q96RY7 1462 aa19.82■□□□□ 0.76
ATRN-202ENST00000446916 ERICH3Q5RHP9 1530 aa19.82■□□□□ 0.76
ATRN-202ENST00000446916 B4GALNT3Q6L9W6 998 aa19.81■□□□□ 0.76
ATRN-202ENST00000446916 IL27Q8NEV9 243 aa19.8■□□□□ 0.76
ATRN-202ENST00000446916 PHLDB1Q86UU1 1377 aa19.8■□□□□ 0.76
ATRN-202ENST00000446916 OSCARQ8IYS5 282 aa19.8■□□□□ 0.76
ATRN-202ENST00000446916 SETD5Q9C0A6 1442 aa19.79■□□□□ 0.76
ATRN-202ENST00000446916 STAG3Q9UJ98 1225 aa19.79■□□□□ 0.76
ATRN-202ENST00000446916 LAS1LQ9Y4W2 734 aaKnown RBP19.77■□□□□ 0.76
ATRN-202ENST00000446916 ANP32AP39687 249 aaKnown RBP19.73■□□□□ 0.75
ATRN-202ENST00000446916 TRHP20396 242 aaPredicted RBP19.72■□□□□ 0.75
ATRN-202ENST00000446916 MLECQ14165 292 aa19.71■□□□□ 0.75
ATRN-202ENST00000446916 BIVM-ERCC5R4GMW8 1640 aa19.7■□□□□ 0.74
ATRN-202ENST00000446916 PKD2Q13563 968 aa19.69■□□□□ 0.74
ATRN-202ENST00000446916 ZBTB47Q9UFB7 747 aaPredicted RBP19.69■□□□□ 0.74
ATRN-202ENST00000446916 GGT6Q6P531 493 aa19.69■□□□□ 0.74
ATRN-202ENST00000446916 PRG4Q92954 1404 aaPredicted RBP19.68■□□□□ 0.74
ATRN-202ENST00000446916 EFCAB2Q5VUJ9 269 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms