RNA–Protein interactions for RNA: ENST00000446564.5

COA1-211, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

TSL 2

Gene COA1, Length 1,177 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-211ENST00000446564 ZNF608Q9ULD9 1512 aaPredicted RBP12.32□□□□□ -0.44
COA1-211ENST00000446564 EIF4G3O43432 1585 aaKnown RBP12.3□□□□□ -0.44
COA1-211ENST00000446564 CLIP1P30622 1438 aa12.28□□□□□ -0.44
COA1-211ENST00000446564 GRIN2BQ13224 1484 aa12.28□□□□□ -0.44
COA1-211ENST00000446564 RANGAP1P46060 587 aaPredicted RBP12.27□□□□□ -0.45
COA1-211ENST00000446564 ADAMTS12P58397 1594 aa12.26□□□□□ -0.45
COA1-211ENST00000446564 CTTNBP2Q8WZ74 1663 aa12.24□□□□□ -0.45
COA1-211ENST00000446564 SNAPC4Q5SXM2 1469 aa12.23□□□□□ -0.45
COA1-211ENST00000446564 FHAD1B1AJZ9 1412 aa12.23□□□□□ -0.45
COA1-211ENST00000446564 NCBP3Q53F19 620 aaKnown RBP12.23□□□□□ -0.45
COA1-211ENST00000446564 CNKSR2Q8WXI2 1034 aa12.19□□□□□ -0.46
COA1-211ENST00000446564 DMRT2Q9Y5R5 561 aa12.19□□□□□ -0.46
COA1-211ENST00000446564 MAGI1Q96QZ7 1491 aaPredicted RBP12.18□□□□□ -0.46
COA1-211ENST00000446564 ARAP1Q96P48 1450 aa12.17□□□□□ -0.46
COA1-211ENST00000446564 ARHGAP35Q9NRY4 1499 aa12.17□□□□□ -0.46
COA1-211ENST00000446564 VPS8Q8N3P4 1428 aa12.16□□□□□ -0.46
COA1-211ENST00000446564 SYNJ2O15056 1496 aa12.14□□□□□ -0.47
COA1-211ENST00000446564 GRIN2AQ12879 1464 aa12.14□□□□□ -0.47
COA1-211ENST00000446564 EFCAB5A4FU69 1503 aa12.12□□□□□ -0.47
COA1-211ENST00000446564 CHMP7Q8WUX9 453 aaPredicted RBP12.11□□□□□ -0.47
COA1-211ENST00000446564 IQGAP2Q13576 1575 aa12.1□□□□□ -0.47
COA1-211ENST00000446564 FBLN2P98095 1184 aa12.1□□□□□ -0.47
COA1-211ENST00000446564 PPARGC1BQ86YN6 1023 aaKnown RBP12.1□□□□□ -0.47
COA1-211ENST00000446564 KCNA4P22459 653 aa12.08□□□□□ -0.48
COA1-211ENST00000446564 POTEDQ86YR6 584 aa12.08□□□□□ -0.48
COA1-211ENST00000446564 P3H3Q8IVL6 736 aa12.08□□□□□ -0.48
COA1-211ENST00000446564 FHOD3Q2V2M9 1422 aa12.08□□□□□ -0.48
COA1-211ENST00000446564 SAMD9Q5K651 1589 aa12.08□□□□□ -0.48
COA1-211ENST00000446564 CEP170Q5SW79 1584 aa12.07□□□□□ -0.48
COA1-211ENST00000446564 KIAA0586Q9BVV6 1533 aa12.06□□□□□ -0.48
COA1-211ENST00000446564 APLP2Q06481 763 aa12.06□□□□□ -0.48
COA1-211ENST00000446564 CHD1O14646 1710 aa12.06□□□□□ -0.48
COA1-211ENST00000446564 TRIM26Q12899 539 aaPredicted RBP12.05□□□□□ -0.48
COA1-211ENST00000446564 TTBK1Q5TCY1 1321 aaPredicted RBP12.05□□□□□ -0.48
COA1-211ENST00000446564 NUP160Q12769 1436 aa12.04□□□□□ -0.48
COA1-211ENST00000446564 PCGF6Q9BYE7 350 aa12.04□□□□□ -0.48
COA1-211ENST00000446564 UGGT2Q9NYU1 1516 aa12.03□□□□□ -0.48
COA1-211ENST00000446564 PCF11O94913 1555 aaKnown RBP12.03□□□□□ -0.48
COA1-211ENST00000446564 FMN1Q68DA7 1419 aa12□□□□□ -0.49
COA1-211ENST00000446564 KIAA0556O60303 1618 aa11.99□□□□□ -0.49
COA1-211ENST00000446564 FYCO1Q9BQS8 1478 aa11.97□□□□□ -0.49
COA1-211ENST00000446564 CASKIN1Q8WXD9 1431 aa11.97□□□□□ -0.49
COA1-211ENST00000446564 ATP1B4Q9UN42 357 aaPredicted RBP11.97□□□□□ -0.49
COA1-211ENST00000446564 CFAP43Q8NDM7 1665 aa11.96□□□□□ -0.5
COA1-211ENST00000446564 TIAM1Q13009 1591 aa11.96□□□□□ -0.5
COA1-211ENST00000446564 DISP1Q96F81 1524 aa11.96□□□□□ -0.5
COA1-211ENST00000446564 NPM3O75607 178 aaKnown RBP11.95□□□□□ -0.5
COA1-211ENST00000446564 RNF216Q9NWF9 866 aaPredicted RBP11.95□□□□□ -0.5
COA1-211ENST00000446564 MAP3K1Q13233 1512 aa11.94□□□□□ -0.5
COA1-211ENST00000446564 JPH4Q96JJ6 628 aa11.93□□□□□ -0.5
COA1-211ENST00000446564 CARMIL2Q6F5E8 1435 aa11.93□□□□□ -0.5
COA1-211ENST00000446564 KANK4Q5T7N3 995 aaPredicted RBP11.92□□□□□ -0.5
COA1-211ENST00000446564 HECW1Q76N89 1606 aa11.91□□□□□ -0.5
COA1-211ENST00000446564 LRRIQ1Q96JM4 1722 aa11.9□□□□□ -0.5
COA1-211ENST00000446564 HOXD11P31277 338 aaPredicted RBP11.89□□□□□ -0.51
COA1-211ENST00000446564 SHROOM2Q13796 1616 aa11.89□□□□□ -0.51
COA1-211ENST00000446564 LRRC9Q6ZRR7 1453 aa11.89□□□□□ -0.51
COA1-211ENST00000446564 PRG4Q92954 1404 aaPredicted RBP11.88□□□□□ -0.51
COA1-211ENST00000446564 CLASP1Q7Z460 1538 aa11.88□□□□□ -0.51
COA1-211ENST00000446564 RAPGEF6Q8TEU7 1601 aa11.88□□□□□ -0.51
COA1-211ENST00000446564 CCDC18Q5T9S5 1454 aa11.88□□□□□ -0.51
COA1-211ENST00000446564 EPRSP07814 1512 aaKnown RBP11.84□□□□□ -0.51
COA1-211ENST00000446564 CDK13Q14004 1512 aaKnown RBP11.83□□□□□ -0.52
COA1-211ENST00000446564 MTUS2Q5JR59 1369 aa11.82□□□□□ -0.52
COA1-211ENST00000446564 EHBP1L1Q8N3D4 1523 aa11.82□□□□□ -0.52
COA1-211ENST00000446564 ARID3CA6NKF2 412 aa11.82□□□□□ -0.52
COA1-211ENST00000446564 ERCC6L2Q5T890 1561 aa11.82□□□□□ -0.52
COA1-211ENST00000446564 NUP153P49790 1475 aaKnown RBP11.82□□□□□ -0.52
COA1-211ENST00000446564 PLB1Q6P1J6 1458 aa11.82□□□□□ -0.52
COA1-211ENST00000446564 ABCA8O94911 1581 aa11.81□□□□□ -0.52
COA1-211ENST00000446564 PTPRGP23470 1445 aa11.8□□□□□ -0.52
COA1-211ENST00000446564 SUPT6HQ7KZ85 1726 aaKnown RBP11.79□□□□□ -0.52
COA1-211ENST00000446564 MAGI3Q5TCQ9 1506 aa11.79□□□□□ -0.52
COA1-211ENST00000446564 RRBP1Q9P2E9 1410 aaKnown RBP11.78□□□□□ -0.52
COA1-211ENST00000446564 DCAF8L1A6NGE4 600 aa11.78□□□□□ -0.52
COA1-211ENST00000446564 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.77□□□□□ -0.53
COA1-211ENST00000446564 HNRNPUL2Q1KMD3 747 aaKnown RBP11.77□□□□□ -0.53
COA1-211ENST00000446564 PHLDB1Q86UU1 1377 aa11.77□□□□□ -0.53
COA1-211ENST00000446564 CCNB3Q8WWL7 1395 aa11.76□□□□□ -0.53
COA1-211ENST00000446564 NCOA2Q15596 1464 aa11.76□□□□□ -0.53
COA1-211ENST00000446564 OSCARQ8IYS5 282 aa11.75□□□□□ -0.53
COA1-211ENST00000446564 UACAQ9BZF9 1416 aa11.73□□□□□ -0.53
COA1-211ENST00000446564 CDK11AQ9UQ88 783 aaPredicted RBP11.73□□□□□ -0.53
COA1-211ENST00000446564 ARHGEF11O15085 1522 aa11.71□□□□□ -0.53
COA1-211ENST00000446564 ABCC2Q92887 1545 aa11.71□□□□□ -0.53
COA1-211ENST00000446564 ATP10BO94823 1461 aa11.71□□□□□ -0.53
COA1-211ENST00000446564 TROQ12816 1431 aaPredicted RBP11.7□□□□□ -0.54
COA1-211ENST00000446564 MYOM3Q5VTT5 1437 aa11.7□□□□□ -0.54
COA1-211ENST00000446564 FGD6Q6ZV73 1430 aa11.7□□□□□ -0.54
COA1-211ENST00000446564 FAM50AQ14320 339 aaKnown RBP11.7□□□□□ -0.54
COA1-211ENST00000446564 ADCY10Q96PN6 1610 aa11.68□□□□□ -0.54
COA1-211ENST00000446564 ITGAEP38570 1179 aa11.68□□□□□ -0.54
COA1-211ENST00000446564 KIF14Q15058 1648 aa11.68□□□□□ -0.54
COA1-211ENST00000446564 HRCP23327 699 aa11.67□□□□□ -0.54
COA1-211ENST00000446564 UHRF1BP1LA0JNW5 1464 aa11.67□□□□□ -0.54
COA1-211ENST00000446564 PLEKHD1A6NEE1 506 aa11.66□□□□□ -0.54
COA1-211ENST00000446564 PTPN23Q9H3S7 1636 aa11.66□□□□□ -0.54
COA1-211ENST00000446564 ZCCHC11Q5TAX3 1644 aaKnown RBP11.64□□□□□ -0.55
COA1-211ENST00000446564 ITSN2Q9NZM3 1697 aa11.64□□□□□ -0.55
COA1-211ENST00000446564 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.64□□□□□ -0.555e-10■■■■■ 46.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms