RNA–Protein interactions for RNA: ENST00000446501.6

BRF1-206, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2 BASIC

Gene BRF1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-206ENST00000446501 CCNB3Q8WWL7 1395 aa23.82■■□□□ 1.4
BRF1-206ENST00000446501 RRBP1Q9P2E9 1410 aaKnown RBP23.82■■□□□ 1.4
BRF1-206ENST00000446501 DHX57Q6P158 1386 aaKnown RBP23.81■■□□□ 1.4
BRF1-206ENST00000446501 TDRD9Q8NDG6 1382 aaKnown RBP23.78■■□□□ 1.4
BRF1-206ENST00000446501 ABCA10Q8WWZ4 1543 aa23.77■■□□□ 1.4
BRF1-206ENST00000446501 FHOD3Q2V2M9 1422 aa23.76■■□□□ 1.39
BRF1-206ENST00000446501 URB2Q14146 1524 aaKnown RBP23.75■■□□□ 1.39
BRF1-206ENST00000446501 TIAM1Q13009 1591 aa23.71■■□□□ 1.39
BRF1-206ENST00000446501 FAM50AQ14320 339 aaKnown RBP23.7■■□□□ 1.39
BRF1-206ENST00000446501 PHLDB1Q86UU1 1377 aa23.69■■□□□ 1.38
BRF1-206ENST00000446501 LRRC9Q6ZRR7 1453 aa23.67■■□□□ 1.38
BRF1-206ENST00000446501 SUPT16HQ9Y5B9 1047 aaKnown RBP23.65■■□□□ 1.38
BRF1-206ENST00000446501 PCF11O94913 1555 aaKnown RBP23.64■■□□□ 1.38
BRF1-206ENST00000446501 FHAD1B1AJZ9 1412 aa23.64■■□□□ 1.37
BRF1-206ENST00000446501 LAMC3Q9Y6N6 1575 aa23.63■■□□□ 1.37
BRF1-206ENST00000446501 RAB3GAP2Q9H2M9 1393 aa23.61■■□□□ 1.37
BRF1-206ENST00000446501 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
BRF1-206ENST00000446501 CLSPNQ9HAW4 1339 aa23.59■■□□□ 1.37
BRF1-206ENST00000446501 GAPVD1Q14C86 1478 aa23.55■■□□□ 1.36
BRF1-206ENST00000446501 MAP3K1Q13233 1512 aa23.55■■□□□ 1.36
BRF1-206ENST00000446501 ANP32EQ9BTT0 268 aa23.54■■□□□ 1.36
BRF1-206ENST00000446501 TSHZ2Q9NRE2 1034 aa23.53■■□□□ 1.36
BRF1-206ENST00000446501 CUL7Q14999 1698 aa23.52■■□□□ 1.36
BRF1-206ENST00000446501 BCL11AQ9H165 835 aa23.5■■□□□ 1.35
BRF1-206ENST00000446501 KIF21AQ7Z4S6 1674 aa23.5■■□□□ 1.35
BRF1-206ENST00000446501 CASKIN1Q8WXD9 1431 aa23.48■■□□□ 1.35
BRF1-206ENST00000446501 WDR97A6NE52 1622 aa23.47■■□□□ 1.35
BRF1-206ENST00000446501 SETD5Q9C0A6 1442 aa23.46■■□□□ 1.35
BRF1-206ENST00000446501 FYCO1Q9BQS8 1478 aa23.46■■□□□ 1.35
BRF1-206ENST00000446501 EFCAB5A4FU69 1503 aa23.46■■□□□ 1.35
BRF1-206ENST00000446501 ABCA5Q8WWZ7 1642 aa23.45■■□□□ 1.34
BRF1-206ENST00000446501 SIN3AQ96ST3 1273 aa23.45■■□□□ 1.34
BRF1-206ENST00000446501 CFAP43Q8NDM7 1665 aa23.44■■□□□ 1.34
BRF1-206ENST00000446501 CTTNBP2Q8WZ74 1663 aa23.44■■□□□ 1.34
BRF1-206ENST00000446501 AQRO60306 1485 aaKnown RBP eCLIP23.43■■□□□ 1.344e-7■■■■■ 29.9
BRF1-206ENST00000446501 FMN1Q68DA7 1419 aa23.42■■□□□ 1.34
BRF1-206ENST00000446501 ARID3CA6NKF2 412 aa23.41■■□□□ 1.34
BRF1-206ENST00000446501 MAPKBP1O60336 1514 aa23.4■■□□□ 1.34
BRF1-206ENST00000446501 MTUS2Q5JR59 1369 aa23.4■■□□□ 1.34
BRF1-206ENST00000446501 SNAPC4Q5SXM2 1469 aa23.39■■□□□ 1.33
BRF1-206ENST00000446501 BCANQ96GW7 911 aa23.37■■□□□ 1.33
BRF1-206ENST00000446501 TARBP1Q13395 1621 aaKnown RBP23.34■■□□□ 1.33
BRF1-206ENST00000446501 FGD6Q6ZV73 1430 aa23.3■■□□□ 1.32
BRF1-206ENST00000446501 SAMD9Q5K651 1589 aa23.29■■□□□ 1.32
BRF1-206ENST00000446501 PTPRKQ15262 1439 aa23.26■■□□□ 1.31
BRF1-206ENST00000446501 GRIN2BQ13224 1484 aa23.25■■□□□ 1.31
BRF1-206ENST00000446501 ZNF608Q9ULD9 1512 aaPredicted RBP23.24■■□□□ 1.31
BRF1-206ENST00000446501 LRRIQ1Q96JM4 1722 aa23.24■■□□□ 1.31
BRF1-206ENST00000446501 HIRIP3Q9BW71 556 aaPredicted RBP23.23■■□□□ 1.31
BRF1-206ENST00000446501 NCOA2Q15596 1464 aa23.23■■□□□ 1.31
BRF1-206ENST00000446501 MRC2Q9UBG0 1479 aa23.22■■□□□ 1.31
BRF1-206ENST00000446501 CHIC2Q9UKJ5 165 aa23.2■■□□□ 1.3
BRF1-206ENST00000446501 KCNH8Q96L42 1107 aa23.19■■□□□ 1.3
BRF1-206ENST00000446501 MAGI3Q5TCQ9 1506 aa23.17■■□□□ 1.3
BRF1-206ENST00000446501 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.17■■□□□ 1.33e-6■■■■■ 37.9
BRF1-206ENST00000446501 PBRM1Q86U86 1689 aa23.16■■□□□ 1.3
BRF1-206ENST00000446501 RRP7BPQ9NSQ0 103 aa23.16■■□□□ 1.3
BRF1-206ENST00000446501 MYOM3Q5VTT5 1437 aa23.16■■□□□ 1.3
BRF1-206ENST00000446501 FKBP8Q14318 412 aa23.13■■□□□ 1.29
BRF1-206ENST00000446501 ADAMTS12P58397 1594 aa23.12■■□□□ 1.29
BRF1-206ENST00000446501 IQGAP2Q13576 1575 aa23.12■■□□□ 1.29
BRF1-206ENST00000446501 CCDC18Q5T9S5 1454 aa23.12■■□□□ 1.29
BRF1-206ENST00000446501 CDK13Q14004 1512 aaKnown RBP23.11■■□□□ 1.29
BRF1-206ENST00000446501 DDX10Q13206 875 aaKnown RBP23.1■■□□□ 1.29
BRF1-206ENST00000446501 HFM1A2PYH4 1435 aa23.07■■□□□ 1.28
BRF1-206ENST00000446501 FBLN2P98095 1184 aa23.07■■□□□ 1.28
BRF1-206ENST00000446501 NAIPQ13075 1403 aa23.07■■□□□ 1.28
BRF1-206ENST00000446501 EHBP1L1Q8N3D4 1523 aa23.07■■□□□ 1.28
BRF1-206ENST00000446501 PPP1R15AO75807 674 aaPredicted RBP23.07■■□□□ 1.28
BRF1-206ENST00000446501 EPRSP07814 1512 aaKnown RBP23.06■■□□□ 1.28
BRF1-206ENST00000446501 SUPT6HQ7KZ85 1726 aaKnown RBP23.06■■□□□ 1.28
BRF1-206ENST00000446501 IFT140Q96RY7 1462 aa23.04■■□□□ 1.28
BRF1-206ENST00000446501 UGGT2Q9NYU1 1516 aa23.04■■□□□ 1.28
BRF1-206ENST00000446501 THOC2Q8NI27 1593 aaKnown RBP23.03■■□□□ 1.28
BRF1-206ENST00000446501 PTPN23Q9H3S7 1636 aa23.02■■□□□ 1.28
BRF1-206ENST00000446501 ERCC6Q03468 1493 aa23.02■■□□□ 1.28
BRF1-206ENST00000446501 TONSLQ96HA7 1378 aa23.01■■□□□ 1.27
BRF1-206ENST00000446501 TRIM52Q96A61 297 aa23■■□□□ 1.27
BRF1-206ENST00000446501 RBM19Q9Y4C8 960 aaKnown RBP23■■□□□ 1.27
BRF1-206ENST00000446501 UACAQ9BZF9 1416 aa23■■□□□ 1.27
BRF1-206ENST00000446501 HECW1Q76N89 1606 aa22.99■■□□□ 1.27
BRF1-206ENST00000446501 WDR62O43379 1518 aa22.98■■□□□ 1.27
BRF1-206ENST00000446501 ARHGEF11O15085 1522 aa22.97■■□□□ 1.27
BRF1-206ENST00000446501 CHMP7Q8WUX9 453 aaPredicted RBP22.97■■□□□ 1.27
BRF1-206ENST00000446501 ZNF644Q9H582 1327 aaPredicted RBP22.96■■□□□ 1.27
BRF1-206ENST00000446501 TIMELESSQ9UNS1 1208 aa22.96■■□□□ 1.27
BRF1-206ENST00000446501 FOXD1Q16676 465 aa22.94■■□□□ 1.26
BRF1-206ENST00000446501 DISP1Q96F81 1524 aa22.94■■□□□ 1.26
BRF1-206ENST00000446501 KIAA0586Q9BVV6 1533 aa22.93■■□□□ 1.26
BRF1-206ENST00000446501 GRIN2AQ12879 1464 aa22.92■■□□□ 1.26
BRF1-206ENST00000446501 EIF4G3O43432 1585 aaKnown RBP22.92■■□□□ 1.26
BRF1-206ENST00000446501 NEFLP07196 543 aa22.91■■□□□ 1.26
BRF1-206ENST00000446501 KDM6BO15054 1643 aa22.88■■□□□ 1.25
BRF1-206ENST00000446501 NUP153P49790 1475 aaKnown RBP22.87■■□□□ 1.25
BRF1-206ENST00000446501 TCOF1Q13428 1488 aaKnown RBP22.87■■□□□ 1.25
BRF1-206ENST00000446501 KIAA0556O60303 1618 aa22.86■■□□□ 1.25
BRF1-206ENST00000446501 DENND4BO75064 1496 aaPredicted RBP22.83■■□□□ 1.24
BRF1-206ENST00000446501 MPHOSPH9Q99550 1183 aa22.83■■□□□ 1.24
BRF1-206ENST00000446501 PLB1Q6P1J6 1458 aa22.82■■□□□ 1.24
BRF1-206ENST00000446501 PRG4Q92954 1404 aaPredicted RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms