RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-238ENST00000446312 CCNB3Q8WWL7 1395 aa17.79■□□□□ 0.44
DDR1-238ENST00000446312 BIVM-ERCC5R4GMW8 1640 aa17.79■□□□□ 0.44
DDR1-238ENST00000446312 CUX1P39880 1505 aa17.76■□□□□ 0.43
DDR1-238ENST00000446312 CHIC2Q9UKJ5 165 aa17.72■□□□□ 0.43
DDR1-238ENST00000446312 ANP32CO43423 234 aa17.7■□□□□ 0.42
DDR1-238ENST00000446312 POLR3GLQ9BT43 218 aa17.7■□□□□ 0.42
DDR1-238ENST00000446312 CFTRP13569 1480 aa17.7■□□□□ 0.42
DDR1-238ENST00000446312 HNRNPUQ00839 825 aaKnown RBP eCLIP17.68■□□□□ 0.42
DDR1-238ENST00000446312 PRXQ9BXM0 1461 aa17.66■□□□□ 0.42
DDR1-238ENST00000446312 RBM19Q9Y4C8 960 aaKnown RBP17.65■□□□□ 0.42
DDR1-238ENST00000446312 PHLDB1Q86UU1 1377 aa17.62■□□□□ 0.41
DDR1-238ENST00000446312 ANO8Q9HCE9 1232 aaPredicted RBP17.61■□□□□ 0.41
DDR1-238ENST00000446312 KIF27Q86VH2 1401 aa17.61■□□□□ 0.41
DDR1-238ENST00000446312 CLSPNQ9HAW4 1339 aa17.61■□□□□ 0.41
DDR1-238ENST00000446312 FOXD1Q16676 465 aa17.6■□□□□ 0.41
DDR1-238ENST00000446312 RRP7BPQ9NSQ0 103 aa17.6■□□□□ 0.41
DDR1-238ENST00000446312 ERICH3Q5RHP9 1530 aa17.59■□□□□ 0.41
DDR1-238ENST00000446312 CUX2O14529 1486 aa17.59■□□□□ 0.41
DDR1-238ENST00000446312 ARHGAP35Q9NRY4 1499 aa17.59■□□□□ 0.41
DDR1-238ENST00000446312 WDR97A6NE52 1622 aa17.59■□□□□ 0.41
DDR1-238ENST00000446312 FAM9BQ8IZU0 186 aa17.58■□□□□ 0.41
DDR1-238ENST00000446312 SETD5Q9C0A6 1442 aa17.55■□□□□ 0.4
DDR1-238ENST00000446312 PPP1R15AO75807 674 aaPredicted RBP17.55■□□□□ 0.4
DDR1-238ENST00000446312 TONSLQ96HA7 1378 aa17.53■□□□□ 0.4
DDR1-238ENST00000446312 RRBP1Q9P2E9 1410 aaKnown RBP17.52■□□□□ 0.4
DDR1-238ENST00000446312 PRDM2Q13029 1718 aa17.52■□□□□ 0.39
DDR1-238ENST00000446312 CCDC184Q52MB2 194 aa17.52■□□□□ 0.39
DDR1-238ENST00000446312 FHOD3Q2V2M9 1422 aa17.52■□□□□ 0.39
DDR1-238ENST00000446312 CADPSQ9ULU8 1353 aa17.51■□□□□ 0.39
DDR1-238ENST00000446312 CC2D2AQ9P2K1 1620 aa17.51■□□□□ 0.39
DDR1-238ENST00000446312 ZNF326Q5BKZ1 582 aaKnown RBP17.5■□□□□ 0.39
DDR1-238ENST00000446312 CARMIL1Q5VZK9 1371 aa17.5■□□□□ 0.39
DDR1-238ENST00000446312 IGF1RP08069 1367 aa17.48■□□□□ 0.39
DDR1-238ENST00000446312 MAPKBP1O60336 1514 aa17.48■□□□□ 0.39
DDR1-238ENST00000446312 MSH5O43196 834 aa17.47■□□□□ 0.39
DDR1-238ENST00000446312 B4GALNT3Q6L9W6 998 aa17.47■□□□□ 0.39
DDR1-238ENST00000446312 FGD5Q6ZNL6 1462 aa17.44■□□□□ 0.38
DDR1-238ENST00000446312 HSPA5P11021 654 aaKnown RBP17.39■□□□□ 0.37
DDR1-238ENST00000446312 CCDC136Q96JN2 1154 aa17.39■□□□□ 0.37
DDR1-238ENST00000446312 SALL2Q9Y467 1007 aaPredicted RBP17.39■□□□□ 0.37
DDR1-238ENST00000446312 CDK11AQ9UQ88 783 aaPredicted RBP17.39■□□□□ 0.37
DDR1-238ENST00000446312 NBR1Q14596 966 aa17.38■□□□□ 0.37
DDR1-238ENST00000446312 MTUS2Q5JR59 1369 aa17.37■□□□□ 0.37
DDR1-238ENST00000446312 NESP48681 1621 aa17.36■□□□□ 0.37
DDR1-238ENST00000446312 FANCD2Q9BXW9 1451 aa17.36■□□□□ 0.37
DDR1-238ENST00000446312 MRS2Q9HD23 443 aa17.35■□□□□ 0.37
DDR1-238ENST00000446312 LRRC9Q6ZRR7 1453 aa17.35■□□□□ 0.37
DDR1-238ENST00000446312 RAD54L2Q9Y4B4 1467 aa17.34■□□□□ 0.37
DDR1-238ENST00000446312 C11orf95C9JLR9 678 aaPredicted RBP17.32■□□□□ 0.36
DDR1-238ENST00000446312 WASHC2AQ641Q2 1341 aa17.29■□□□□ 0.36
DDR1-238ENST00000446312 TDRD9Q8NDG6 1382 aaKnown RBP17.29■□□□□ 0.36
DDR1-238ENST00000446312 CCER2I3L3R5 266 aa17.28■□□□□ 0.36
DDR1-238ENST00000446312 DNAJC5BQ9UF47 199 aa17.28■□□□□ 0.36
DDR1-238ENST00000446312 TIAM1Q13009 1591 aa17.26■□□□□ 0.35
DDR1-238ENST00000446312 PTPRKQ15262 1439 aa17.26■□□□□ 0.35
DDR1-238ENST00000446312 L3MBTL2Q969R5 705 aa17.25■□□□□ 0.35
DDR1-238ENST00000446312 ZNF777Q9ULD5 760 aaPredicted RBP17.25■□□□□ 0.35
DDR1-238ENST00000446312 POLA1P09884 1462 aaPredicted RBP17.24■□□□□ 0.35
DDR1-238ENST00000446312 AQRO60306 1485 aaKnown RBP eCLIP17.24■□□□□ 0.355e-8■■■■■ 51
DDR1-238ENST00000446312 TOPBP1Q92547 1522 aa17.24■□□□□ 0.35
DDR1-238ENST00000446312 DNMBPQ6XZF7 1577 aa17.23■□□□□ 0.35
DDR1-238ENST00000446312 EIF4G2P78344 907 aaKnown RBP eCLIP17.23■□□□□ 0.358e-8■■■■■ 39.6
DDR1-238ENST00000446312 NPM2Q86SE8 214 aaKnown RBP17.23■□□□□ 0.35
DDR1-238ENST00000446312 EIF5BO60841 1220 aaKnown RBP17.22■□□□□ 0.35
DDR1-238ENST00000446312 CCDC18Q5T9S5 1454 aa17.2■□□□□ 0.34
DDR1-238ENST00000446312 ABCA10Q8WWZ4 1543 aa17.19■□□□□ 0.34
DDR1-238ENST00000446312 PCF11O94913 1555 aaKnown RBP17.19■□□□□ 0.34
DDR1-238ENST00000446312 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.18■□□□□ 0.34
DDR1-238ENST00000446312 FHAD1B1AJZ9 1412 aa17.17■□□□□ 0.34
DDR1-238ENST00000446312 ZNF644Q9H582 1327 aaPredicted RBP17.17■□□□□ 0.34
DDR1-238ENST00000446312 DEKP35659 375 aaKnown RBP17.17■□□□□ 0.34
DDR1-238ENST00000446312 KDM2AQ9Y2K7 1162 aa17.17■□□□□ 0.34
DDR1-238ENST00000446312 URB2Q14146 1524 aaKnown RBP17.15■□□□□ 0.34
DDR1-238ENST00000446312 NBPF8Q3BBV2 869 aa17.15■□□□□ 0.34
DDR1-238ENST00000446312 MPHOSPH9Q99550 1183 aa17.15■□□□□ 0.34
DDR1-238ENST00000446312 FGD6Q6ZV73 1430 aa17.14■□□□□ 0.33
DDR1-238ENST00000446312 SLC24A1O60721 1099 aa17.14■□□□□ 0.33
DDR1-238ENST00000446312 PAK3O75914 559 aaPredicted RBP17.14■□□□□ 0.33
DDR1-238ENST00000446312 SLC4A1APQ9BWU0 796 aaKnown RBP17.13■□□□□ 0.33
DDR1-238ENST00000446312 UBE2Q2Q8WVN8 375 aa17.12■□□□□ 0.33
DDR1-238ENST00000446312 PRKRIP1Q9H875 184 aaPredicted RBP17.11■□□□□ 0.33
DDR1-238ENST00000446312 PPP4R2Q9NY27 417 aa17.11■□□□□ 0.33
DDR1-238ENST00000446312 MAP3K1Q13233 1512 aa17.1■□□□□ 0.33
DDR1-238ENST00000446312 RTN4Q9NQC3 1192 aaKnown RBP17.08■□□□□ 0.33
DDR1-238ENST00000446312 TIMELESSQ9UNS1 1208 aa17.08■□□□□ 0.33
DDR1-238ENST00000446312 SKAP1Q86WV1 359 aa17.08■□□□□ 0.32
DDR1-238ENST00000446312 FBLN2P98095 1184 aa17.07■□□□□ 0.32
DDR1-238ENST00000446312 LAMC3Q9Y6N6 1575 aa17.07■□□□□ 0.32
DDR1-238ENST00000446312 CFAP43Q8NDM7 1665 aa17.05■□□□□ 0.32
DDR1-238ENST00000446312 AKNAQ7Z591 1439 aa17.05■□□□□ 0.32
DDR1-238ENST00000446312 NAIPQ13075 1403 aa17.05■□□□□ 0.32
DDR1-238ENST00000446312 CUL7Q14999 1698 aa17.05■□□□□ 0.32
DDR1-238ENST00000446312 CTTNBP2Q8WZ74 1663 aa17.04■□□□□ 0.32
DDR1-238ENST00000446312 UACAQ9BZF9 1416 aa17.03■□□□□ 0.32
DDR1-238ENST00000446312 KIF7Q2M1P5 1343 aa17.02■□□□□ 0.32
DDR1-238ENST00000446312 NCOA2Q15596 1464 aa17.02■□□□□ 0.31
DDR1-238ENST00000446312 KIF21AQ7Z4S6 1674 aa17.02■□□□□ 0.31
DDR1-238ENST00000446312 ABCA5Q8WWZ7 1642 aa17.01■□□□□ 0.31
DDR1-238ENST00000446312 LAS1LQ9Y4W2 734 aaKnown RBP17■□□□□ 0.31
DDR1-238ENST00000446312 TMC1Q8TDI8 760 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms