RNA–Protein interactions for RNA: ENST00000446273.1

TNRC6B-205, Transcript of trinucleotide repeat containing 6B, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TNRC6B, Length 4,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-205ENST00000446273 GTF3C3Q9Y5Q9 886 aa11.42□□□□□ -0.58
TNRC6B-205ENST00000446273 CCNB3Q8WWL7 1395 aa11.42□□□□□ -0.58
TNRC6B-205ENST00000446273 STAG3Q9UJ98 1225 aa11.42□□□□□ -0.58
TNRC6B-205ENST00000446273 BCANQ96GW7 911 aa11.41□□□□□ -0.58
TNRC6B-205ENST00000446273 TRHP20396 242 aaPredicted RBP11.41□□□□□ -0.58
TNRC6B-205ENST00000446273 CARMIL2Q6F5E8 1435 aa11.41□□□□□ -0.58
TNRC6B-205ENST00000446273 HMGXB3Q12766 1538 aa11.4□□□□□ -0.59
TNRC6B-205ENST00000446273 KIF21BO75037 1637 aa11.39□□□□□ -0.59
TNRC6B-205ENST00000446273 RAPGEF2Q9Y4G8 1499 aa11.39□□□□□ -0.59
TNRC6B-205ENST00000446273 FMN1Q68DA7 1419 aa11.38□□□□□ -0.59
TNRC6B-205ENST00000446273 OSCARQ8IYS5 282 aa11.38□□□□□ -0.59
TNRC6B-205ENST00000446273 ERICH3Q5RHP9 1530 aa11.35□□□□□ -0.59
TNRC6B-205ENST00000446273 PLPPR3Q6T4P5 718 aa11.35□□□□□ -0.59
TNRC6B-205ENST00000446273 NEFMP07197 916 aa11.34□□□□□ -0.59
TNRC6B-205ENST00000446273 PEG3Q9GZU2 1588 aa11.34□□□□□ -0.59
TNRC6B-205ENST00000446273 NESP48681 1621 aa11.33□□□□□ -0.6
TNRC6B-205ENST00000446273 CFTRP13569 1480 aa11.32□□□□□ -0.6
TNRC6B-205ENST00000446273 ARHGAP35Q9NRY4 1499 aa11.32□□□□□ -0.6
TNRC6B-205ENST00000446273 JPH4Q96JJ6 628 aa11.31□□□□□ -0.6
TNRC6B-205ENST00000446273 CHIC2Q9UKJ5 165 aa11.31□□□□□ -0.6
TNRC6B-205ENST00000446273 CFDP1Q9UEE9 299 aaPredicted RBP11.3□□□□□ -0.6
TNRC6B-205ENST00000446273 SETD5Q9C0A6 1442 aa11.3□□□□□ -0.6
TNRC6B-205ENST00000446273 ZNF326Q5BKZ1 582 aaKnown RBP11.3□□□□□ -0.6
TNRC6B-205ENST00000446273 FGD5Q6ZNL6 1462 aa11.29□□□□□ -0.6
TNRC6B-205ENST00000446273 MRC2Q9UBG0 1479 aa11.29□□□□□ -0.6
TNRC6B-205ENST00000446273 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.28□□□□□ -0.63e-6■■□□□ 13.9
TNRC6B-205ENST00000446273 CHGAP10645 457 aaKnown RBP11.28□□□□□ -0.6
TNRC6B-205ENST00000446273 TOP2BQ02880 1626 aa11.27□□□□□ -0.61
TNRC6B-205ENST00000446273 ARID4BQ4LE39 1312 aaPredicted RBP11.27□□□□□ -0.61
TNRC6B-205ENST00000446273 GAPVD1Q14C86 1478 aa11.26□□□□□ -0.61
TNRC6B-205ENST00000446273 UNC13AQ9UPW8 1703 aa11.26□□□□□ -0.61
TNRC6B-205ENST00000446273 EIF4G2P78344 907 aaKnown RBP eCLIP11.25□□□□□ -0.61
TNRC6B-205ENST00000446273 RAD54L2Q9Y4B4 1467 aa11.25□□□□□ -0.61
TNRC6B-205ENST00000446273 RUSC2Q8N2Y8 1516 aa11.24□□□□□ -0.61
TNRC6B-205ENST00000446273 CYB5RLQ6IPT4 315 aa11.24□□□□□ -0.61
TNRC6B-205ENST00000446273 DAXXQ9UER7 740 aaPredicted RBP11.24□□□□□ -0.61
TNRC6B-205ENST00000446273 DDX10Q13206 875 aaKnown RBP11.22□□□□□ -0.61
TNRC6B-205ENST00000446273 AQRO60306 1485 aaKnown RBP eCLIP11.22□□□□□ -0.612e-6■■■■□ 25.4
TNRC6B-205ENST00000446273 HDGFP51858 240 aaKnown RBP11.21□□□□□ -0.61
TNRC6B-205ENST00000446273 MIER1Q8N108 512 aa11.21□□□□□ -0.61
TNRC6B-205ENST00000446273 SYNJ1O43426 1573 aa11.21□□□□□ -0.61
TNRC6B-205ENST00000446273 SLC24A1O60721 1099 aa11.21□□□□□ -0.62
TNRC6B-205ENST00000446273 LAMC3Q9Y6N6 1575 aa11.2□□□□□ -0.62
TNRC6B-205ENST00000446273 IFT140Q96RY7 1462 aa11.2□□□□□ -0.62
TNRC6B-205ENST00000446273 IGF1RP08069 1367 aa11.19□□□□□ -0.62
TNRC6B-205ENST00000446273 PRXQ9BXM0 1461 aa11.18□□□□□ -0.62
TNRC6B-205ENST00000446273 CNGB1Q14028 1251 aaPredicted RBP11.18□□□□□ -0.62
TNRC6B-205ENST00000446273 GRIN2BQ13224 1484 aa11.18□□□□□ -0.62
TNRC6B-205ENST00000446273 PTPRGP23470 1445 aa11.17□□□□□ -0.62
TNRC6B-205ENST00000446273 KANK4Q5T7N3 995 aaPredicted RBP11.17□□□□□ -0.62
TNRC6B-205ENST00000446273 RSPH4AQ5TD94 716 aa11.17□□□□□ -0.62
TNRC6B-205ENST00000446273 KANK1Q14678 1352 aa11.17□□□□□ -0.62
TNRC6B-205ENST00000446273 RRP7BPQ9NSQ0 103 aa11.17□□□□□ -0.62
TNRC6B-205ENST00000446273 PPP1R15AO75807 674 aaPredicted RBP11.16□□□□□ -0.62
TNRC6B-205ENST00000446273 TOPBP1Q92547 1522 aa11.16□□□□□ -0.62
TNRC6B-205ENST00000446273 EFCAB5A4FU69 1503 aa11.15□□□□□ -0.62
TNRC6B-205ENST00000446273 RAB3GAP2Q9H2M9 1393 aa11.15□□□□□ -0.62
TNRC6B-205ENST00000446273 CCDC18Q5T9S5 1454 aa11.15□□□□□ -0.62
TNRC6B-205ENST00000446273 EFCAB2Q5VUJ9 269 aa11.15□□□□□ -0.62
TNRC6B-205ENST00000446273 CCER2I3L3R5 266 aa11.14□□□□□ -0.63
TNRC6B-205ENST00000446273 CUX1P39880 1505 aa11.14□□□□□ -0.63
TNRC6B-205ENST00000446273 CDCA8Q53HL2 280 aa11.12□□□□□ -0.63
TNRC6B-205ENST00000446273 SCAF1Q9H7N4 1312 aaKnown RBP11.12□□□□□ -0.63
TNRC6B-205ENST00000446273 HNRNPUQ00839 825 aaKnown RBP eCLIP11.12□□□□□ -0.63
TNRC6B-205ENST00000446273 ZBTB47Q9UFB7 747 aaPredicted RBP11.11□□□□□ -0.63
TNRC6B-205ENST00000446273 POLA1P09884 1462 aaPredicted RBP11.11□□□□□ -0.63
TNRC6B-205ENST00000446273 FHOD3Q2V2M9 1422 aa11.11□□□□□ -0.63
TNRC6B-205ENST00000446273 DHX57Q6P158 1386 aaKnown RBP11.1□□□□□ -0.63
TNRC6B-205ENST00000446273 CASKIN1Q8WXD9 1431 aa11.09□□□□□ -0.63
TNRC6B-205ENST00000446273 DNMBPQ6XZF7 1577 aa11.09□□□□□ -0.63
TNRC6B-205ENST00000446273 BIVM-ERCC5R4GMW8 1640 aa11.09□□□□□ -0.63
TNRC6B-205ENST00000446273 RRBP1Q9P2E9 1410 aaKnown RBP11.09□□□□□ -0.63
TNRC6B-205ENST00000446273 FYCO1Q9BQS8 1478 aa11.09□□□□□ -0.63
TNRC6B-205ENST00000446273 RTL5Q5HYW3 569 aaPredicted RBP11.08□□□□□ -0.64
TNRC6B-205ENST00000446273 TMC1Q8TDI8 760 aa11.08□□□□□ -0.64
TNRC6B-205ENST00000446273 MAP3K1Q13233 1512 aa11.07□□□□□ -0.64
TNRC6B-205ENST00000446273 MLECQ14165 292 aa11.07□□□□□ -0.64
TNRC6B-205ENST00000446273 FKBP8Q14318 412 aa11.07□□□□□ -0.64
TNRC6B-205ENST00000446273 MRS2Q9HD23 443 aa11.07□□□□□ -0.64
TNRC6B-205ENST00000446273 LRRC9Q6ZRR7 1453 aa11.06□□□□□ -0.64
TNRC6B-205ENST00000446273 ANKRD30AQ9BXX3 1397 aa11.06□□□□□ -0.64
TNRC6B-205ENST00000446273 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.05□□□□□ -0.64
TNRC6B-205ENST00000446273 SIN3AQ96ST3 1273 aa11.04□□□□□ -0.64
TNRC6B-205ENST00000446273 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.03□□□□□ -0.64
TNRC6B-205ENST00000446273 ARAP1Q96P48 1450 aa11.03□□□□□ -0.64
TNRC6B-205ENST00000446273 SNAPC4Q5SXM2 1469 aa11.02□□□□□ -0.64
TNRC6B-205ENST00000446273 CUL7Q14999 1698 aa11.02□□□□□ -0.65
TNRC6B-205ENST00000446273 KDM2AQ9Y2K7 1162 aa11.02□□□□□ -0.65
TNRC6B-205ENST00000446273 C14orf37Q86TY3 774 aa11.02□□□□□ -0.65
TNRC6B-205ENST00000446273 ABCA10Q8WWZ4 1543 aa11.02□□□□□ -0.65
TNRC6B-205ENST00000446273 ERICH6BQ5W0A0 696 aa11.01□□□□□ -0.65
TNRC6B-205ENST00000446273 GGT6Q6P531 493 aa11.01□□□□□ -0.65
TNRC6B-205ENST00000446273 FAM69CQ0P6D2 419 aa11.01□□□□□ -0.65
TNRC6B-205ENST00000446273 MYOM3Q5VTT5 1437 aa11.01□□□□□ -0.65
TNRC6B-205ENST00000446273 FAM9BQ8IZU0 186 aa11.01□□□□□ -0.65
TNRC6B-205ENST00000446273 FGD6Q6ZV73 1430 aa11.01□□□□□ -0.65
TNRC6B-205ENST00000446273 ANP32AP39687 249 aaKnown RBP11.01□□□□□ -0.65
TNRC6B-205ENST00000446273 PRG4Q92954 1404 aaPredicted RBP11□□□□□ -0.65
TNRC6B-205ENST00000446273 TIAM1Q13009 1591 aa10.99□□□□□ -0.65
TNRC6B-205ENST00000446273 MPHOSPH9Q99550 1183 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms