RNA–Protein interactions for RNA: ENST00000445770.3

LINC01949-201, Transcript of long intergenic non-protein coding RNA 1949, humanhuman

TSL 1 (best) BASIC

Gene LINC01949, Length 2,721 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01949-201ENST00000445770 DNMBPQ6XZF7 1577 aa14.61□□□□□ -0.07
LINC01949-201ENST00000445770 PELP1Q8IZL8 1130 aaKnown RBP14.61□□□□□ -0.07
LINC01949-201ENST00000445770 NEUROD1Q13562 356 aa14.6□□□□□ -0.07
LINC01949-201ENST00000445770 CCNB3Q8WWL7 1395 aa14.6□□□□□ -0.07
LINC01949-201ENST00000445770 DHX57Q6P158 1386 aaKnown RBP14.59□□□□□ -0.07
LINC01949-201ENST00000445770 PHLDB1Q86UU1 1377 aa14.58□□□□□ -0.08
LINC01949-201ENST00000445770 ABCA10Q8WWZ4 1543 aa14.56□□□□□ -0.08
LINC01949-201ENST00000445770 MIER1Q8N108 512 aa14.55□□□□□ -0.08
LINC01949-201ENST00000445770 PCF11O94913 1555 aaKnown RBP14.54□□□□□ -0.08
LINC01949-201ENST00000445770 RRBP1Q9P2E9 1410 aaKnown RBP14.54□□□□□ -0.08
LINC01949-201ENST00000445770 TIAM1Q13009 1591 aa14.52□□□□□ -0.08
LINC01949-201ENST00000445770 KIF21AQ7Z4S6 1674 aa14.52□□□□□ -0.08
LINC01949-201ENST00000445770 LRRC9Q6ZRR7 1453 aa14.5□□□□□ -0.09
LINC01949-201ENST00000445770 AQRO60306 1485 aaKnown RBP eCLIP14.5□□□□□ -0.09
LINC01949-201ENST00000445770 RAB3GAP2Q9H2M9 1393 aa14.5□□□□□ -0.09
LINC01949-201ENST00000445770 GAPVD1Q14C86 1478 aa14.49□□□□□ -0.09
LINC01949-201ENST00000445770 PDS5BQ9NTI5 1447 aa14.48□□□□□ -0.09
LINC01949-201ENST00000445770 LAMC3Q9Y6N6 1575 aa14.48□□□□□ -0.09
LINC01949-201ENST00000445770 SIN3AQ96ST3 1273 aa14.47□□□□□ -0.09
LINC01949-201ENST00000445770 ACIN1Q9UKV3 1341 aaKnown RBP14.46□□□□□ -0.1
LINC01949-201ENST00000445770 FHAD1B1AJZ9 1412 aa14.44□□□□□ -0.1
LINC01949-201ENST00000445770 HIRIP3Q9BW71 556 aaPredicted RBP14.42□□□□□ -0.1
LINC01949-201ENST00000445770 GTF3C3Q9Y5Q9 886 aa14.41□□□□□ -0.1
LINC01949-201ENST00000445770 ZNF608Q9ULD9 1512 aaPredicted RBP14.39□□□□□ -0.11
LINC01949-201ENST00000445770 MTUS2Q5JR59 1369 aa14.39□□□□□ -0.11
LINC01949-201ENST00000445770 WDR97A6NE52 1622 aa14.39□□□□□ -0.11
LINC01949-201ENST00000445770 ABCA5Q8WWZ7 1642 aa14.39□□□□□ -0.11
LINC01949-201ENST00000445770 CUL7Q14999 1698 aa14.38□□□□□ -0.11
LINC01949-201ENST00000445770 CHIC2Q9UKJ5 165 aa14.37□□□□□ -0.11
LINC01949-201ENST00000445770 CTTNBP2Q8WZ74 1663 aa14.37□□□□□ -0.11
LINC01949-201ENST00000445770 FBLN2P98095 1184 aa14.37□□□□□ -0.11
LINC01949-201ENST00000445770 FOXD1Q16676 465 aa14.37□□□□□ -0.11
LINC01949-201ENST00000445770 CASKIN1Q8WXD9 1431 aa14.37□□□□□ -0.11
LINC01949-201ENST00000445770 SETD5Q9C0A6 1442 aa14.35□□□□□ -0.11
LINC01949-201ENST00000445770 SNAPC4Q5SXM2 1469 aa14.35□□□□□ -0.11
LINC01949-201ENST00000445770 MAPKBP1O60336 1514 aa14.35□□□□□ -0.11
LINC01949-201ENST00000445770 FYCO1Q9BQS8 1478 aa14.35□□□□□ -0.11
LINC01949-201ENST00000445770 TARBP1Q13395 1621 aaKnown RBP14.34□□□□□ -0.11
LINC01949-201ENST00000445770 CFAP43Q8NDM7 1665 aa14.34□□□□□ -0.11
LINC01949-201ENST00000445770 CENPBP07199 599 aaPredicted RBP14.33□□□□□ -0.12
LINC01949-201ENST00000445770 PTPRKQ15262 1439 aa14.32□□□□□ -0.12
LINC01949-201ENST00000445770 FMN1Q68DA7 1419 aa14.32□□□□□ -0.12
LINC01949-201ENST00000445770 EFCAB5A4FU69 1503 aa14.31□□□□□ -0.12
LINC01949-201ENST00000445770 RRP7BPQ9NSQ0 103 aa14.31□□□□□ -0.12
LINC01949-201ENST00000445770 LRRIQ1Q96JM4 1722 aa14.31□□□□□ -0.12
LINC01949-201ENST00000445770 DNAJC5Q9H3Z4 198 aa14.3□□□□□ -0.12
LINC01949-201ENST00000445770 MAP3K1Q13233 1512 aa14.29□□□□□ -0.12
LINC01949-201ENST00000445770 FGD6Q6ZV73 1430 aa14.29□□□□□ -0.12
LINC01949-201ENST00000445770 KCNH8Q96L42 1107 aa14.29□□□□□ -0.12
LINC01949-201ENST00000445770 CLSPNQ9HAW4 1339 aa14.28□□□□□ -0.12
LINC01949-201ENST00000445770 MRC2Q9UBG0 1479 aa14.28□□□□□ -0.12
LINC01949-201ENST00000445770 MAGI3Q5TCQ9 1506 aa14.28□□□□□ -0.12
LINC01949-201ENST00000445770 CDK13Q14004 1512 aaKnown RBP14.27□□□□□ -0.12
LINC01949-201ENST00000445770 NCOA2Q15596 1464 aa14.27□□□□□ -0.13
LINC01949-201ENST00000445770 ERCC6Q03468 1493 aa14.26□□□□□ -0.13
LINC01949-201ENST00000445770 SAMD9Q5K651 1589 aa14.25□□□□□ -0.13
LINC01949-201ENST00000445770 GRIN2BQ13224 1484 aa14.25□□□□□ -0.13
LINC01949-201ENST00000445770 PBRM1Q86U86 1689 aa14.24□□□□□ -0.13
LINC01949-201ENST00000445770 DDX10Q13206 875 aaKnown RBP14.22□□□□□ -0.13
LINC01949-201ENST00000445770 ZNF644Q9H582 1327 aaPredicted RBP14.21□□□□□ -0.13
LINC01949-201ENST00000445770 ADAMTS12P58397 1594 aa14.2□□□□□ -0.14
LINC01949-201ENST00000445770 IQGAP2Q13576 1575 aa14.2□□□□□ -0.14
LINC01949-201ENST00000445770 CHMP7Q8WUX9 453 aaPredicted RBP14.19□□□□□ -0.14
LINC01949-201ENST00000445770 TRIM52Q96A61 297 aa14.19□□□□□ -0.14
LINC01949-201ENST00000445770 MYOM3Q5VTT5 1437 aa14.19□□□□□ -0.14
LINC01949-201ENST00000445770 CCDC18Q5T9S5 1454 aa14.18□□□□□ -0.14
LINC01949-201ENST00000445770 PLPPR3Q6T4P5 718 aa14.17□□□□□ -0.14
LINC01949-201ENST00000445770 THOC2Q8NI27 1593 aaKnown RBP14.16□□□□□ -0.14
LINC01949-201ENST00000445770 EPRSP07814 1512 aaKnown RBP14.16□□□□□ -0.14
LINC01949-201ENST00000445770 ZNF777Q9ULD5 760 aaPredicted RBP14.15□□□□□ -0.14
LINC01949-201ENST00000445770 NAIPQ13075 1403 aa14.14□□□□□ -0.15
LINC01949-201ENST00000445770 EIF4G3O43432 1585 aaKnown RBP14.14□□□□□ -0.15
LINC01949-201ENST00000445770 IFT140Q96RY7 1462 aa14.14□□□□□ -0.15
LINC01949-201ENST00000445770 SUPT6HQ7KZ85 1726 aaKnown RBP14.12□□□□□ -0.15
LINC01949-201ENST00000445770 PTPN23Q9H3S7 1636 aa14.12□□□□□ -0.15
LINC01949-201ENST00000445770 WDR62O43379 1518 aa14.11□□□□□ -0.15
LINC01949-201ENST00000445770 EHBP1L1Q8N3D4 1523 aa14.11□□□□□ -0.15
LINC01949-201ENST00000445770 TONSLQ96HA7 1378 aa14.11□□□□□ -0.15
LINC01949-201ENST00000445770 KDM6BO15054 1643 aa14.11□□□□□ -0.15
LINC01949-201ENST00000445770 HFM1A2PYH4 1435 aa14.11□□□□□ -0.15
LINC01949-201ENST00000445770 PPP1R15AO75807 674 aaPredicted RBP14.11□□□□□ -0.15
LINC01949-201ENST00000445770 DISP1Q96F81 1524 aa14.11□□□□□ -0.15
LINC01949-201ENST00000445770 UGGT2Q9NYU1 1516 aa14.11□□□□□ -0.15
LINC01949-201ENST00000445770 GRIN2AQ12879 1464 aa14.1□□□□□ -0.15
LINC01949-201ENST00000445770 PLB1Q6P1J6 1458 aa14.1□□□□□ -0.15
LINC01949-201ENST00000445770 PRG4Q92954 1404 aaPredicted RBP14.08□□□□□ -0.15
LINC01949-201ENST00000445770 HECW1Q76N89 1606 aa14.08□□□□□ -0.16
LINC01949-201ENST00000445770 MYT1Q01538 1121 aa14.07□□□□□ -0.16
LINC01949-201ENST00000445770 NUP153P49790 1475 aaKnown RBP14.07□□□□□ -0.16
LINC01949-201ENST00000445770 UACAQ9BZF9 1416 aa14.06□□□□□ -0.16
LINC01949-201ENST00000445770 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.06□□□□□ -0.16
LINC01949-201ENST00000445770 PPP6R1Q9UPN7 881 aa14.06□□□□□ -0.16
LINC01949-201ENST00000445770 KIAA0586Q9BVV6 1533 aa14.05□□□□□ -0.16
LINC01949-201ENST00000445770 JPH4Q96JJ6 628 aa14.05□□□□□ -0.16
LINC01949-201ENST00000445770 KIAA0556O60303 1618 aa14.04□□□□□ -0.16
LINC01949-201ENST00000445770 CEP170Q5SW79 1584 aa14.04□□□□□ -0.16
LINC01949-201ENST00000445770 ARHGEF11O15085 1522 aa14.03□□□□□ -0.16
LINC01949-201ENST00000445770 CNGB1Q14028 1251 aaPredicted RBP14.02□□□□□ -0.16
LINC01949-201ENST00000445770 DENND4BO75064 1496 aaPredicted RBP14.02□□□□□ -0.16
LINC01949-201ENST00000445770 MPHOSPH9Q99550 1183 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms