RNA–Protein interactions for RNA: ENST00000445692.5

APLF-203, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 3,906 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-203ENST00000445692 RUSC2Q8N2Y8 1516 aa16.74■□□□□ 0.27
APLF-203ENST00000445692 GOLGA3Q08378 1498 aa16.74■□□□□ 0.27
APLF-203ENST00000445692 SALL2Q9Y467 1007 aaPredicted RBP16.72■□□□□ 0.27
APLF-203ENST00000445692 EIF5BO60841 1220 aaKnown RBP16.68■□□□□ 0.26
APLF-203ENST00000445692 CHIC2Q9UKJ5 165 aa16.67■□□□□ 0.26
APLF-203ENST00000445692 TONSLQ96HA7 1378 aa16.67■□□□□ 0.26
APLF-203ENST00000445692 DAXXQ9UER7 740 aaPredicted RBP16.65■□□□□ 0.26
APLF-203ENST00000445692 B4GALNT3Q6L9W6 998 aa16.63■□□□□ 0.25
APLF-203ENST00000445692 WRNQ14191 1432 aaPredicted RBP eCLIP16.63■□□□□ 0.25
APLF-203ENST00000445692 RTN4Q9NQC3 1192 aaKnown RBP16.61■□□□□ 0.25
APLF-203ENST00000445692 MRS2Q9HD23 443 aa16.6■□□□□ 0.25
APLF-203ENST00000445692 ANP32AP39687 249 aaKnown RBP16.58■□□□□ 0.24
APLF-203ENST00000445692 KIF21AQ7Z4S6 1674 aa16.56■□□□□ 0.24
APLF-203ENST00000445692 CCDC136Q96JN2 1154 aa16.54■□□□□ 0.24
APLF-203ENST00000445692 EEA1Q15075 1411 aa16.53■□□□□ 0.24
APLF-203ENST00000445692 DHX57Q6P158 1386 aaKnown RBP16.52■□□□□ 0.24
APLF-203ENST00000445692 CEP164Q9UPV0 1460 aa16.52■□□□□ 0.23
APLF-203ENST00000445692 CADPSQ9ULU8 1353 aa16.51■□□□□ 0.23
APLF-203ENST00000445692 VPS8Q8N3P4 1428 aa16.51■□□□□ 0.23
APLF-203ENST00000445692 RRP7BPQ9NSQ0 103 aa16.51■□□□□ 0.23
APLF-203ENST00000445692 CFTRP13569 1480 aa16.49■□□□□ 0.23
APLF-203ENST00000445692 LAMC3Q9Y6N6 1575 aa16.49■□□□□ 0.23
APLF-203ENST00000445692 DEKP35659 375 aaKnown RBP16.48■□□□□ 0.23
APLF-203ENST00000445692 ZBTB47Q9UFB7 747 aaPredicted RBP16.47■□□□□ 0.23
APLF-203ENST00000445692 CCNB3Q8WWL7 1395 aa16.47■□□□□ 0.23
APLF-203ENST00000445692 PRKCSHP14314 528 aaPredicted RBP16.46■□□□□ 0.23
APLF-203ENST00000445692 RAB3GAP2Q9H2M9 1393 aa16.43■□□□□ 0.22
APLF-203ENST00000445692 LAS1LQ9Y4W2 734 aaKnown RBP16.43■□□□□ 0.22
APLF-203ENST00000445692 THOC2Q8NI27 1593 aaKnown RBP16.4■□□□□ 0.22
APLF-203ENST00000445692 RAPGEF2Q9Y4G8 1499 aa16.4■□□□□ 0.22
APLF-203ENST00000445692 ARXQ96QS3 562 aa16.39■□□□□ 0.21
APLF-203ENST00000445692 ERCC6Q03468 1493 aa16.38■□□□□ 0.21
APLF-203ENST00000445692 PRDM2Q13029 1718 aa16.38■□□□□ 0.21
APLF-203ENST00000445692 ZNF777Q9ULD5 760 aaPredicted RBP16.38■□□□□ 0.21
APLF-203ENST00000445692 FANCD2Q9BXW9 1451 aa16.37■□□□□ 0.21
APLF-203ENST00000445692 PPP4R2Q9NY27 417 aa16.37■□□□□ 0.21
APLF-203ENST00000445692 EIF4G2P78344 907 aaKnown RBP eCLIP16.37■□□□□ 0.21
APLF-203ENST00000445692 NOP58Q9Y2X3 529 aaKnown RBP16.36■□□□□ 0.21
APLF-203ENST00000445692 FOXD1Q16676 465 aa16.35■□□□□ 0.21
APLF-203ENST00000445692 TMC1Q8TDI8 760 aa16.35■□□□□ 0.21
APLF-203ENST00000445692 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.33■□□□□ 0.2
APLF-203ENST00000445692 KDM2AQ9Y2K7 1162 aa16.32■□□□□ 0.2
APLF-203ENST00000445692 URB2Q14146 1524 aaKnown RBP16.31■□□□□ 0.2
APLF-203ENST00000445692 PPP1R15AO75807 674 aaPredicted RBP16.3■□□□□ 0.2
APLF-203ENST00000445692 PDS5BQ9NTI5 1447 aa16.3■□□□□ 0.2
APLF-203ENST00000445692 SLC4A1APQ9BWU0 796 aaKnown RBP16.3■□□□□ 0.2
APLF-203ENST00000445692 CCER2I3L3R5 266 aa16.29■□□□□ 0.2
APLF-203ENST00000445692 MTUS2Q5JR59 1369 aa16.29■□□□□ 0.2
APLF-203ENST00000445692 HSPA5P11021 654 aaKnown RBP16.28■□□□□ 0.2
APLF-203ENST00000445692 SETD5Q9C0A6 1442 aa16.26■□□□□ 0.19
APLF-203ENST00000445692 MSH5O43196 834 aa16.26■□□□□ 0.19
APLF-203ENST00000445692 MYT1LQ9UL68 1186 aa16.26■□□□□ 0.19
APLF-203ENST00000445692 NEFMP07197 916 aa16.23■□□□□ 0.19
APLF-203ENST00000445692 WDR62O43379 1518 aa16.22■□□□□ 0.19
APLF-203ENST00000445692 MRC2Q9UBG0 1479 aa16.21■□□□□ 0.19
APLF-203ENST00000445692 ANO8Q9HCE9 1232 aaPredicted RBP16.2■□□□□ 0.18
APLF-203ENST00000445692 CUX1P39880 1505 aa16.18■□□□□ 0.18
APLF-203ENST00000445692 KIF27Q86VH2 1401 aa16.17■□□□□ 0.18
APLF-203ENST00000445692 FBLN2P98095 1184 aa16.16■□□□□ 0.18
APLF-203ENST00000445692 TOPBP1Q92547 1522 aa16.15■□□□□ 0.18
APLF-203ENST00000445692 CUX2O14529 1486 aa16.15■□□□□ 0.18
APLF-203ENST00000445692 CCDC184Q52MB2 194 aa16.13■□□□□ 0.17
APLF-203ENST00000445692 SYNJ1O43426 1573 aa16.13■□□□□ 0.17
APLF-203ENST00000445692 PAK3O75914 559 aaPredicted RBP16.13■□□□□ 0.17
APLF-203ENST00000445692 CANXP27824 592 aaKnown RBP16.11■□□□□ 0.17
APLF-203ENST00000445692 DNMBPQ6XZF7 1577 aa16.08■□□□□ 0.16
APLF-203ENST00000445692 KIF21BO75037 1637 aa16.08■□□□□ 0.16
APLF-203ENST00000445692 RGL3Q3MIN7 710 aa16.08■□□□□ 0.16
APLF-203ENST00000445692 RGS3P49796 1198 aa16.07■□□□□ 0.16
APLF-203ENST00000445692 L3MBTL2Q969R5 705 aa16.07■□□□□ 0.16
APLF-203ENST00000445692 ZNF608Q9ULD9 1512 aaPredicted RBP16.07■□□□□ 0.16
APLF-203ENST00000445692 RAD54L2Q9Y4B4 1467 aa16.07■□□□□ 0.16
APLF-203ENST00000445692 FANCIQ9NVI1 1328 aa16.07■□□□□ 0.16
APLF-203ENST00000445692 SLC4A3P48751 1232 aa16.06■□□□□ 0.16
APLF-203ENST00000445692 POLA1P09884 1462 aaPredicted RBP16.06■□□□□ 0.16
APLF-203ENST00000445692 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.05■□□□□ 0.16
APLF-203ENST00000445692 CARMIL1Q5VZK9 1371 aa16.05■□□□□ 0.16
APLF-203ENST00000445692 TARBP1Q13395 1621 aaKnown RBP16.03■□□□□ 0.16
APLF-203ENST00000445692 TIMELESSQ9UNS1 1208 aa16.03■□□□□ 0.16
APLF-203ENST00000445692 FGD5Q6ZNL6 1462 aa16.02■□□□□ 0.16
APLF-203ENST00000445692 IPO9Q96P70 1041 aaKnown RBP16.02■□□□□ 0.16
APLF-203ENST00000445692 PRKRIP1Q9H875 184 aaPredicted RBP16■□□□□ 0.15
APLF-203ENST00000445692 CC2D1BQ5T0F9 858 aaKnown RBP16■□□□□ 0.15
APLF-203ENST00000445692 IL27Q8NEV9 243 aa16■□□□□ 0.15
APLF-203ENST00000445692 CARD11Q9BXL7 1154 aa16■□□□□ 0.15
APLF-203ENST00000445692 PHLDB1Q86UU1 1377 aa16■□□□□ 0.15
APLF-203ENST00000445692 ARAP1Q96P48 1450 aa15.99■□□□□ 0.15
APLF-203ENST00000445692 FHOD3Q2V2M9 1422 aa15.99■□□□□ 0.15
APLF-203ENST00000445692 BIVM-ERCC5R4GMW8 1640 aa15.98■□□□□ 0.15
APLF-203ENST00000445692 TOP2BQ02880 1626 aa15.98■□□□□ 0.15
APLF-203ENST00000445692 PLIN1O60240 522 aa15.97■□□□□ 0.15
APLF-203ENST00000445692 WDR97A6NE52 1622 aa15.97■□□□□ 0.15
APLF-203ENST00000445692 WASHC2AQ641Q2 1341 aa15.96■□□□□ 0.15
APLF-203ENST00000445692 GLIPR1L2Q4G1C9 344 aa15.96■□□□□ 0.15
APLF-203ENST00000445692 MPHOSPH9Q99550 1183 aa15.96■□□□□ 0.15
APLF-203ENST00000445692 SENP3Q9H4L4 574 aaPredicted RBP15.96■□□□□ 0.15
APLF-203ENST00000445692 EXOC6Q8TAG9 804 aa15.95■□□□□ 0.14
APLF-203ENST00000445692 AQRO60306 1485 aaKnown RBP eCLIP15.95■□□□□ 0.14
APLF-203ENST00000445692 ARHGAP35Q9NRY4 1499 aa15.94■□□□□ 0.14
APLF-203ENST00000445692 NUDCQ9Y266 331 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms