RNA–Protein interactions for RNA: ENST00000445658.6

ERBB2-203, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2 BASIC

Gene ERBB2, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-203ENST00000445658 ATP1B4Q9UN42 357 aaPredicted RBP18.74■□□□□ 0.59
ERBB2-203ENST00000445658 CARMIL1Q5VZK9 1371 aa18.72■□□□□ 0.59
ERBB2-203ENST00000445658 TARBP1Q13395 1621 aaKnown RBP18.7■□□□□ 0.58
ERBB2-203ENST00000445658 ARHGAP35Q9NRY4 1499 aa18.68■□□□□ 0.58
ERBB2-203ENST00000445658 CTTNBP2Q8WZ74 1663 aa18.68■□□□□ 0.58
ERBB2-203ENST00000445658 P3H3Q8IVL6 736 aa18.62■□□□□ 0.57
ERBB2-203ENST00000445658 MRC2Q9UBG0 1479 aa18.62■□□□□ 0.57
ERBB2-203ENST00000445658 ITGAEP38570 1179 aa18.61■□□□□ 0.57
ERBB2-203ENST00000445658 PBRM1Q86U86 1689 aa18.59■□□□□ 0.57
ERBB2-203ENST00000445658 WDR62O43379 1518 aa18.58■□□□□ 0.56
ERBB2-203ENST00000445658 GAPVD1Q14C86 1478 aa18.58■□□□□ 0.56
ERBB2-203ENST00000445658 EFCAB5A4FU69 1503 aa18.56■□□□□ 0.56
ERBB2-203ENST00000445658 MAP3K1Q13233 1512 aa18.55■□□□□ 0.56
ERBB2-203ENST00000445658 ZNF316A6NFI3 1004 aaPredicted RBP18.55■□□□□ 0.56
ERBB2-203ENST00000445658 MIER1Q8N108 512 aa18.53■□□□□ 0.56
ERBB2-203ENST00000445658 CFAP43Q8NDM7 1665 aa18.49■□□□□ 0.55
ERBB2-203ENST00000445658 TDRD9Q8NDG6 1382 aaKnown RBP18.48■□□□□ 0.55
ERBB2-203ENST00000445658 SAMD9Q5K651 1589 aa18.48■□□□□ 0.55
ERBB2-203ENST00000445658 PRKCSHP14314 528 aaPredicted RBP18.47■□□□□ 0.55
ERBB2-203ENST00000445658 TIAM1Q13009 1591 aa18.47■□□□□ 0.55
ERBB2-203ENST00000445658 THOC2Q8NI27 1593 aaKnown RBP18.47■□□□□ 0.55
ERBB2-203ENST00000445658 ADAMTS12P58397 1594 aa18.46■□□□□ 0.55
ERBB2-203ENST00000445658 IFT140Q96RY7 1462 aa18.45■□□□□ 0.54
ERBB2-203ENST00000445658 FHAD1B1AJZ9 1412 aa18.44■□□□□ 0.54
ERBB2-203ENST00000445658 AQRO60306 1485 aaKnown RBP eCLIP18.43■□□□□ 0.548e-7■■■■□ 26
ERBB2-203ENST00000445658 PCF11O94913 1555 aaKnown RBP18.43■□□□□ 0.54
ERBB2-203ENST00000445658 FYCO1Q9BQS8 1478 aa18.39■□□□□ 0.53
ERBB2-203ENST00000445658 RRBP1Q9P2E9 1410 aaKnown RBP18.39■□□□□ 0.53
ERBB2-203ENST00000445658 BCL11AQ9H165 835 aa18.38■□□□□ 0.53
ERBB2-203ENST00000445658 GRIN2BQ13224 1484 aa18.38■□□□□ 0.53
ERBB2-203ENST00000445658 KANK4Q5T7N3 995 aaPredicted RBP18.36■□□□□ 0.53
ERBB2-203ENST00000445658 EIF4G3O43432 1585 aaKnown RBP18.35■□□□□ 0.53
ERBB2-203ENST00000445658 CASKIN1Q8WXD9 1431 aa18.35■□□□□ 0.53
ERBB2-203ENST00000445658 ARID3CA6NKF2 412 aa18.34■□□□□ 0.53
ERBB2-203ENST00000445658 LRRC9Q6ZRR7 1453 aa18.33■□□□□ 0.53
ERBB2-203ENST00000445658 FHOD3Q2V2M9 1422 aa18.33■□□□□ 0.52
ERBB2-203ENST00000445658 SNAPC4Q5SXM2 1469 aa18.32■□□□□ 0.52
ERBB2-203ENST00000445658 ERCC6Q03468 1493 aa18.31■□□□□ 0.52
ERBB2-203ENST00000445658 LRRIQ1Q96JM4 1722 aa18.31■□□□□ 0.52
ERBB2-203ENST00000445658 FMN1Q68DA7 1419 aa18.31■□□□□ 0.52
ERBB2-203ENST00000445658 ZNF608Q9ULD9 1512 aaPredicted RBP18.31■□□□□ 0.52
ERBB2-203ENST00000445658 IQGAP2Q13576 1575 aa18.3■□□□□ 0.52
ERBB2-203ENST00000445658 FAM50AQ14320 339 aaKnown RBP18.24■□□□□ 0.51
ERBB2-203ENST00000445658 UGGT2Q9NYU1 1516 aa18.24■□□□□ 0.51
ERBB2-203ENST00000445658 MAGI1Q96QZ7 1491 aaPredicted RBP18.22■□□□□ 0.51
ERBB2-203ENST00000445658 CCNB3Q8WWL7 1395 aa18.22■□□□□ 0.51
ERBB2-203ENST00000445658 GRIN2AQ12879 1464 aa18.18■□□□□ 0.5
ERBB2-203ENST00000445658 FBLN2P98095 1184 aa18.17■□□□□ 0.5
ERBB2-203ENST00000445658 KIAA0586Q9BVV6 1533 aa18.16■□□□□ 0.5
ERBB2-203ENST00000445658 HECW1Q76N89 1606 aa18.16■□□□□ 0.5
ERBB2-203ENST00000445658 PHLDB1Q86UU1 1377 aa18.14■□□□□ 0.49
ERBB2-203ENST00000445658 KIAA0556O60303 1618 aa18.14■□□□□ 0.49
ERBB2-203ENST00000445658 BCANQ96GW7 911 aa18.13■□□□□ 0.49
ERBB2-203ENST00000445658 CCDC18Q5T9S5 1454 aa18.13■□□□□ 0.49
ERBB2-203ENST00000445658 SYNJ2O15056 1496 aa18.13■□□□□ 0.49
ERBB2-203ENST00000445658 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.12■□□□□ 0.49
ERBB2-203ENST00000445658 EHBP1L1Q8N3D4 1523 aa18.11■□□□□ 0.49
ERBB2-203ENST00000445658 SUPT6HQ7KZ85 1726 aaKnown RBP18.11■□□□□ 0.49
ERBB2-203ENST00000445658 CEP170Q5SW79 1584 aa18.1■□□□□ 0.49
ERBB2-203ENST00000445658 DISP1Q96F81 1524 aa18.09■□□□□ 0.49
ERBB2-203ENST00000445658 ARHGEF11O15085 1522 aa18.09■□□□□ 0.49
ERBB2-203ENST00000445658 CLSPNQ9HAW4 1339 aa18.07■□□□□ 0.48
ERBB2-203ENST00000445658 NUP160Q12769 1436 aa18.05■□□□□ 0.48
ERBB2-203ENST00000445658 MAGI3Q5TCQ9 1506 aa18.04■□□□□ 0.48
ERBB2-203ENST00000445658 DHX57Q6P158 1386 aaKnown RBP18.04■□□□□ 0.48
ERBB2-203ENST00000445658 EPRSP07814 1512 aaKnown RBP18.02■□□□□ 0.48
ERBB2-203ENST00000445658 FGD6Q6ZV73 1430 aa18.01■□□□□ 0.47
ERBB2-203ENST00000445658 RAPGEF6Q8TEU7 1601 aa18.01■□□□□ 0.47
ERBB2-203ENST00000445658 NCOA2Q15596 1464 aa18.01■□□□□ 0.47
ERBB2-203ENST00000445658 SUPT16HQ9Y5B9 1047 aaKnown RBP18■□□□□ 0.47
ERBB2-203ENST00000445658 MTUS2Q5JR59 1369 aa17.99■□□□□ 0.47
ERBB2-203ENST00000445658 KCNH8Q96L42 1107 aa17.98■□□□□ 0.47
ERBB2-203ENST00000445658 MYOM3Q5VTT5 1437 aa17.97■□□□□ 0.47
ERBB2-203ENST00000445658 PTPN23Q9H3S7 1636 aa17.95■□□□□ 0.46
ERBB2-203ENST00000445658 SETD5Q9C0A6 1442 aa17.94■□□□□ 0.46
ERBB2-203ENST00000445658 CDK13Q14004 1512 aaKnown RBP17.94■□□□□ 0.46
ERBB2-203ENST00000445658 TCOF1Q13428 1488 aaKnown RBP17.93■□□□□ 0.46
ERBB2-203ENST00000445658 ERICH6Q7L0X2 663 aa17.93■□□□□ 0.46
ERBB2-203ENST00000445658 RAB3GAP2Q9H2M9 1393 aa17.93■□□□□ 0.46
ERBB2-203ENST00000445658 NUP153P49790 1475 aaKnown RBP17.92■□□□□ 0.46
ERBB2-203ENST00000445658 CHMP7Q8WUX9 453 aaPredicted RBP17.92■□□□□ 0.46
ERBB2-203ENST00000445658 CHD1O14646 1710 aa17.91■□□□□ 0.46
ERBB2-203ENST00000445658 HIRIP3Q9BW71 556 aaPredicted RBP17.91■□□□□ 0.46
ERBB2-203ENST00000445658 CHIC2Q9UKJ5 165 aa17.9■□□□□ 0.46
ERBB2-203ENST00000445658 MAPKBP1O60336 1514 aa17.89■□□□□ 0.45
ERBB2-203ENST00000445658 ADCY10Q96PN6 1610 aa17.88■□□□□ 0.45
ERBB2-203ENST00000445658 CARMIL2Q6F5E8 1435 aa17.86■□□□□ 0.45
ERBB2-203ENST00000445658 MIA2Q96PC5 1412 aa17.86■□□□□ 0.45
ERBB2-203ENST00000445658 SHROOM2Q13796 1616 aa17.85■□□□□ 0.45
ERBB2-203ENST00000445658 GCC2Q8IWJ2 1684 aa17.85■□□□□ 0.45
ERBB2-203ENST00000445658 ABCA8O94911 1581 aa17.85■□□□□ 0.45
ERBB2-203ENST00000445658 HFM1A2PYH4 1435 aa17.83■□□□□ 0.45
ERBB2-203ENST00000445658 PTPRKQ15262 1439 aa17.82■□□□□ 0.44
ERBB2-203ENST00000445658 DDX10Q13206 875 aaKnown RBP17.82■□□□□ 0.44
ERBB2-203ENST00000445658 TSHZ2Q9NRE2 1034 aa17.82■□□□□ 0.44
ERBB2-203ENST00000445658 FKBP8Q14318 412 aa17.81■□□□□ 0.44
ERBB2-203ENST00000445658 SIN3AQ96ST3 1273 aa17.81■□□□□ 0.44
ERBB2-203ENST00000445658 ITSN2Q9NZM3 1697 aa17.8■□□□□ 0.44
ERBB2-203ENST00000445658 JPH4Q96JJ6 628 aa17.79■□□□□ 0.44
ERBB2-203ENST00000445658 AKNAQ7Z591 1439 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms