RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 CTTNBP2Q8WZ74 1663 aa24.6■■□□□ 1.53
CCNE1-203ENST00000444983 UBTFP17480 764 aaKnown RBP24.59■■□□□ 1.53
CCNE1-203ENST00000444983 KIAA0586Q9BVV6 1533 aa24.57■■□□□ 1.52
CCNE1-203ENST00000444983 CLASP1Q7Z460 1538 aa24.52■■□□□ 1.52
CCNE1-203ENST00000444983 OSCARQ8IYS5 282 aa24.51■■□□□ 1.51
CCNE1-203ENST00000444983 IQGAP2Q13576 1575 aa24.51■■□□□ 1.51
CCNE1-203ENST00000444983 SHROOM2Q13796 1616 aa24.43■■□□□ 1.5
CCNE1-203ENST00000444983 UGGT2Q9NYU1 1516 aa24.43■■□□□ 1.5
CCNE1-203ENST00000444983 JPH4Q96JJ6 628 aa24.4■■□□□ 1.5
CCNE1-203ENST00000444983 CEP162Q5TB80 1403 aa24.38■■□□□ 1.49
CCNE1-203ENST00000444983 SAMD9Q5K651 1589 aa24.35■■□□□ 1.49
CCNE1-203ENST00000444983 DISP1Q96F81 1524 aa24.33■■□□□ 1.49
CCNE1-203ENST00000444983 CLIP1P30622 1438 aa24.33■■□□□ 1.49
CCNE1-203ENST00000444983 ARHGAP35Q9NRY4 1499 aa24.32■■□□□ 1.48
CCNE1-203ENST00000444983 EFCAB5A4FU69 1503 aa24.32■■□□□ 1.48
CCNE1-203ENST00000444983 RANGAP1P46060 587 aaPredicted RBP24.3■■□□□ 1.48
CCNE1-203ENST00000444983 PRG4Q92954 1404 aaPredicted RBP24.29■■□□□ 1.48
CCNE1-203ENST00000444983 KIAA0556O60303 1618 aa24.28■■□□□ 1.48
CCNE1-203ENST00000444983 ERCC6L2Q5T890 1561 aa24.24■■□□□ 1.47
CCNE1-203ENST00000444983 CARMIL2Q6F5E8 1435 aa24.23■■□□□ 1.47
CCNE1-203ENST00000444983 ARAP1Q96P48 1450 aa24.22■■□□□ 1.47
CCNE1-203ENST00000444983 FHOD3Q2V2M9 1422 aa24.18■■□□□ 1.46
CCNE1-203ENST00000444983 P3H3Q8IVL6 736 aa24.18■■□□□ 1.46
CCNE1-203ENST00000444983 ARHGEF11O15085 1522 aa24.14■■□□□ 1.45
CCNE1-203ENST00000444983 FMN1Q68DA7 1419 aa24.08■■□□□ 1.44
CCNE1-203ENST00000444983 PTPRGP23470 1445 aa24.07■■□□□ 1.44
CCNE1-203ENST00000444983 RIMBP3CA6NJZ7 1639 aa24.06■■□□□ 1.44
CCNE1-203ENST00000444983 RIMBP3BA6NNM3 1639 aa24.06■■□□□ 1.44
CCNE1-203ENST00000444983 RIMBP3Q9UFD9 1639 aa24.06■■□□□ 1.44
CCNE1-203ENST00000444983 VPS8Q8N3P4 1428 aa24.06■■□□□ 1.44
CCNE1-203ENST00000444983 ABCA8O94911 1581 aa23.99■■□□□ 1.43
CCNE1-203ENST00000444983 PLB1Q6P1J6 1458 aa23.98■■□□□ 1.43
CCNE1-203ENST00000444983 CASKIN1Q8WXD9 1431 aa23.98■■□□□ 1.43
CCNE1-203ENST00000444983 DNAJC5Q9H3Z4 198 aa23.97■■□□□ 1.43
CCNE1-203ENST00000444983 PCF11O94913 1555 aaKnown RBP23.96■■□□□ 1.43
CCNE1-203ENST00000444983 TTBK1Q5TCY1 1321 aaPredicted RBP23.96■■□□□ 1.43
CCNE1-203ENST00000444983 RAPGEF6Q8TEU7 1601 aa23.96■■□□□ 1.43
CCNE1-203ENST00000444983 UACAQ9BZF9 1416 aa23.94■■□□□ 1.42
CCNE1-203ENST00000444983 FYCO1Q9BQS8 1478 aa23.94■■□□□ 1.42
CCNE1-203ENST00000444983 UHRF1BP1LA0JNW5 1464 aa23.92■■□□□ 1.42
CCNE1-203ENST00000444983 NUP153P49790 1475 aaKnown RBP23.9■■□□□ 1.42
CCNE1-203ENST00000444983 ABCC2Q92887 1545 aa23.9■■□□□ 1.42
CCNE1-203ENST00000444983 HECW1Q76N89 1606 aa23.88■■□□□ 1.41
CCNE1-203ENST00000444983 LRRIQ1Q96JM4 1722 aa23.88■■□□□ 1.41
CCNE1-203ENST00000444983 ADCY10Q96PN6 1610 aa23.87■■□□□ 1.41
CCNE1-203ENST00000444983 CYB5RLQ6IPT4 315 aa23.84■■□□□ 1.41
CCNE1-203ENST00000444983 EPRSP07814 1512 aaKnown RBP23.83■■□□□ 1.41
CCNE1-203ENST00000444983 KDM5BQ9UGL1 1544 aa23.81■■□□□ 1.4
CCNE1-203ENST00000444983 MAP3K1Q13233 1512 aa23.8■■□□□ 1.4
CCNE1-203ENST00000444983 ATP10BO94823 1461 aa23.8■■□□□ 1.4
CCNE1-203ENST00000444983 CCDC18Q5T9S5 1454 aa23.79■■□□□ 1.4
CCNE1-203ENST00000444983 ATP1B4Q9UN42 357 aaPredicted RBP23.78■■□□□ 1.4
CCNE1-203ENST00000444983 CDK13Q14004 1512 aaKnown RBP23.76■■□□□ 1.39
CCNE1-203ENST00000444983 TIAM1Q13009 1591 aa23.76■■□□□ 1.39
CCNE1-203ENST00000444983 CFAP43Q8NDM7 1665 aa23.76■■□□□ 1.39
CCNE1-203ENST00000444983 ZCCHC11Q5TAX3 1644 aaKnown RBP23.73■■□□□ 1.39
CCNE1-203ENST00000444983 ARID3CA6NKF2 412 aa23.71■■□□□ 1.39
CCNE1-203ENST00000444983 APLP2Q06481 763 aa23.68■■□□□ 1.38
CCNE1-203ENST00000444983 MAGI3Q5TCQ9 1506 aa23.67■■□□□ 1.38
CCNE1-203ENST00000444983 KANK4Q5T7N3 995 aaPredicted RBP23.66■■□□□ 1.38
CCNE1-203ENST00000444983 LRRC9Q6ZRR7 1453 aa23.65■■□□□ 1.38
CCNE1-203ENST00000444983 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.63■■□□□ 1.37
CCNE1-203ENST00000444983 HNRNPUL2Q1KMD3 747 aaKnown RBP23.63■■□□□ 1.37
CCNE1-203ENST00000444983 CDK11AQ9UQ88 783 aaPredicted RBP23.62■■□□□ 1.37
CCNE1-203ENST00000444983 NPM1P06748 294 aaKnown RBP eCLIP23.61■■□□□ 1.37
CCNE1-203ENST00000444983 MAPKBP1O60336 1514 aa23.6■■□□□ 1.37
CCNE1-203ENST00000444983 PLEKHD1A6NEE1 506 aa23.59■■□□□ 1.37
CCNE1-203ENST00000444983 TROQ12816 1431 aaPredicted RBP23.59■■□□□ 1.37
CCNE1-203ENST00000444983 EHBP1L1Q8N3D4 1523 aa23.59■■□□□ 1.37
CCNE1-203ENST00000444983 ASXL2Q76L83 1435 aa23.57■■□□□ 1.36
CCNE1-203ENST00000444983 MTUS2Q5JR59 1369 aa23.56■■□□□ 1.36
CCNE1-203ENST00000444983 WDR7Q9Y4E6 1490 aa23.55■■□□□ 1.36
CCNE1-203ENST00000444983 PPARGC1BQ86YN6 1023 aaKnown RBP23.52■■□□□ 1.36
CCNE1-203ENST00000444983 KIF14Q15058 1648 aa23.5■■□□□ 1.35
CCNE1-203ENST00000444983 SUPT6HQ7KZ85 1726 aaKnown RBP23.49■■□□□ 1.35
CCNE1-203ENST00000444983 NCOA2Q15596 1464 aa23.46■■□□□ 1.35
CCNE1-203ENST00000444983 ABCC10Q5T3U5 1492 aa23.46■■□□□ 1.35
CCNE1-203ENST00000444983 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.44■■□□□ 1.34
CCNE1-203ENST00000444983 KCNH8Q96L42 1107 aa23.43■■□□□ 1.34
CCNE1-203ENST00000444983 ABCA9Q8IUA7 1624 aa23.41■■□□□ 1.34
CCNE1-203ENST00000444983 TTC37Q6PGP7 1564 aa23.4■■□□□ 1.34
CCNE1-203ENST00000444983 PHLDB1Q86UU1 1377 aa23.39■■□□□ 1.34
CCNE1-203ENST00000444983 GLI2P10070 1586 aa23.39■■□□□ 1.33
CCNE1-203ENST00000444983 DIP2BQ9P265 1576 aa23.39■■□□□ 1.33
CCNE1-203ENST00000444983 GPATCH8Q9UKJ3 1502 aaKnown RBP23.36■■□□□ 1.33
CCNE1-203ENST00000444983 CDC42BPAQ5VT25 1732 aa23.35■■□□□ 1.33
CCNE1-203ENST00000444983 MYOM3Q5VTT5 1437 aa23.33■■□□□ 1.33
CCNE1-203ENST00000444983 KIF13AQ9H1H9 1805 aa23.33■■□□□ 1.33
CCNE1-203ENST00000444983 CCNB3Q8WWL7 1395 aa23.33■■□□□ 1.32
CCNE1-203ENST00000444983 MYO5CQ9NQX4 1742 aa23.31■■□□□ 1.32
CCNE1-203ENST00000444983 MAP3K4Q9Y6R4 1608 aa23.3■■□□□ 1.32
CCNE1-203ENST00000444983 CDC42BPBQ9Y5S2 1711 aa23.3■■□□□ 1.32
CCNE1-203ENST00000444983 PLCH2O75038 1416 aa23.3■■□□□ 1.32
CCNE1-203ENST00000444983 PREX2Q70Z35 1606 aa23.3■■□□□ 1.32
CCNE1-203ENST00000444983 ITSN2Q9NZM3 1697 aa23.3■■□□□ 1.32
CCNE1-203ENST00000444983 ARAP3Q8WWN8 1544 aa23.29■■□□□ 1.32
CCNE1-203ENST00000444983 MIA2Q96PC5 1412 aa23.28■■□□□ 1.32
CCNE1-203ENST00000444983 FAM69CQ0P6D2 419 aa23.28■■□□□ 1.32
CCNE1-203ENST00000444983 FGD6Q6ZV73 1430 aa23.27■■□□□ 1.31
CCNE1-203ENST00000444983 RRBP1Q9P2E9 1410 aaKnown RBP23.27■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms