RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 JPH4Q96JJ6 628 aa23.18■■□□□ 1.3
SSBP3-208ENST00000444533 RIMBP3CA6NJZ7 1639 aa23.15■■□□□ 1.3
SSBP3-208ENST00000444533 RIMBP3BA6NNM3 1639 aa23.15■■□□□ 1.3
SSBP3-208ENST00000444533 RIMBP3Q9UFD9 1639 aa23.15■■□□□ 1.3
SSBP3-208ENST00000444533 IQGAP2Q13576 1575 aa23.11■■□□□ 1.29
SSBP3-208ENST00000444533 PRG4Q92954 1404 aaPredicted RBP23.09■■□□□ 1.29
SSBP3-208ENST00000444533 KIF21BO75037 1637 aa23.09■■□□□ 1.29
SSBP3-208ENST00000444533 SHROOM2Q13796 1616 aa23.09■■□□□ 1.29
SSBP3-208ENST00000444533 CTTNBP2Q8WZ74 1663 aa23.06■■□□□ 1.28
SSBP3-208ENST00000444533 CARMIL2Q6F5E8 1435 aa23.05■■□□□ 1.28
SSBP3-208ENST00000444533 UBTFP17480 764 aaKnown RBP23.04■■□□□ 1.28
SSBP3-208ENST00000444533 CYB5RLQ6IPT4 315 aa23.04■■□□□ 1.28
SSBP3-208ENST00000444533 AEBP2Q6ZN18 517 aaPredicted RBP23.04■■□□□ 1.28
SSBP3-208ENST00000444533 GOLGA3Q08378 1498 aa23.03■■□□□ 1.28
SSBP3-208ENST00000444533 EHMT2Q96KQ7 1210 aa23.02■■□□□ 1.28
SSBP3-208ENST00000444533 ARAP1Q96P48 1450 aa22.98■■□□□ 1.27
SSBP3-208ENST00000444533 UGGT2Q9NYU1 1516 aa22.96■■□□□ 1.27
SSBP3-208ENST00000444533 ERCC6L2Q5T890 1561 aa22.95■■□□□ 1.26
SSBP3-208ENST00000444533 TNIKQ9UKE5 1360 aa22.9■■□□□ 1.26
SSBP3-208ENST00000444533 TTBK1Q5TCY1 1321 aaPredicted RBP22.89■■□□□ 1.26
SSBP3-208ENST00000444533 RANGAP1P46060 587 aaPredicted RBP22.89■■□□□ 1.25
SSBP3-208ENST00000444533 PTPRGP23470 1445 aa22.88■■□□□ 1.25
SSBP3-208ENST00000444533 DISP1Q96F81 1524 aa22.86■■□□□ 1.25
SSBP3-208ENST00000444533 KIAA0556O60303 1618 aa22.85■■□□□ 1.25
SSBP3-208ENST00000444533 NPM1P06748 294 aaKnown RBP eCLIP22.79■■□□□ 1.24
SSBP3-208ENST00000444533 P3H3Q8IVL6 736 aa22.79■■□□□ 1.24
SSBP3-208ENST00000444533 EFCAB5A4FU69 1503 aa22.77■■□□□ 1.24
SSBP3-208ENST00000444533 SAMD9Q5K651 1589 aa22.73■■□□□ 1.23
SSBP3-208ENST00000444533 UACAQ9BZF9 1416 aa22.71■■□□□ 1.23
SSBP3-208ENST00000444533 FHOD3Q2V2M9 1422 aa22.66■■□□□ 1.22
SSBP3-208ENST00000444533 LOC105371045A0A1W2PR82 267 aa22.65■■□□□ 1.22
SSBP3-208ENST00000444533 UHRF1BP1LA0JNW5 1464 aa22.64■■□□□ 1.21
SSBP3-208ENST00000444533 ADCY10Q96PN6 1610 aa22.64■■□□□ 1.21
SSBP3-208ENST00000444533 ABCC2Q92887 1545 aa22.63■■□□□ 1.21
SSBP3-208ENST00000444533 CLIP1P30622 1438 aa22.62■■□□□ 1.21
SSBP3-208ENST00000444533 PLB1Q6P1J6 1458 aa22.6■■□□□ 1.21
SSBP3-208ENST00000444533 ARHGAP35Q9NRY4 1499 aa22.6■■□□□ 1.21
SSBP3-208ENST00000444533 FMN1Q68DA7 1419 aa22.6■■□□□ 1.21
SSBP3-208ENST00000444533 TRHP20396 242 aaPredicted RBP22.59■■□□□ 1.21
SSBP3-208ENST00000444533 ABCA8O94911 1581 aa22.57■■□□□ 1.2
SSBP3-208ENST00000444533 CEP162Q5TB80 1403 aa22.55■■□□□ 1.2
SSBP3-208ENST00000444533 RAPGEF6Q8TEU7 1601 aa22.53■■□□□ 1.2
SSBP3-208ENST00000444533 ATP1B4Q9UN42 357 aaPredicted RBP22.53■■□□□ 1.2
SSBP3-208ENST00000444533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.52■■□□□ 1.2
SSBP3-208ENST00000444533 HNRNPUL2Q1KMD3 747 aaKnown RBP22.52■■□□□ 1.2
SSBP3-208ENST00000444533 KDM5BQ9UGL1 1544 aa22.52■■□□□ 1.19
SSBP3-208ENST00000444533 MAPKBP1O60336 1514 aa22.5■■□□□ 1.19
SSBP3-208ENST00000444533 ARID3CA6NKF2 412 aa22.47■■□□□ 1.19
SSBP3-208ENST00000444533 ZCCHC11Q5TAX3 1644 aaKnown RBP22.46■■□□□ 1.19
SSBP3-208ENST00000444533 ASXL2Q76L83 1435 aa22.44■■□□□ 1.18
SSBP3-208ENST00000444533 HECW1Q76N89 1606 aa22.42■■□□□ 1.18
SSBP3-208ENST00000444533 NUP153P49790 1475 aaKnown RBP22.41■■□□□ 1.18
SSBP3-208ENST00000444533 ATP10BO94823 1461 aa22.41■■□□□ 1.18
SSBP3-208ENST00000444533 FAM69CQ0P6D2 419 aa22.4■■□□□ 1.18
SSBP3-208ENST00000444533 CDK11AQ9UQ88 783 aaPredicted RBP22.39■■□□□ 1.17
SSBP3-208ENST00000444533 ABCC10Q5T3U5 1492 aa22.38■■□□□ 1.17
SSBP3-208ENST00000444533 CASKIN1Q8WXD9 1431 aa22.38■■□□□ 1.17
SSBP3-208ENST00000444533 WDR7Q9Y4E6 1490 aa22.37■■□□□ 1.17
SSBP3-208ENST00000444533 PLEKHD1A6NEE1 506 aa22.37■■□□□ 1.17
SSBP3-208ENST00000444533 FYCO1Q9BQS8 1478 aa22.35■■□□□ 1.17
SSBP3-208ENST00000444533 KCNH8Q96L42 1107 aa22.34■■□□□ 1.17
SSBP3-208ENST00000444533 CCDC18Q5T9S5 1454 aa22.33■■□□□ 1.16
SSBP3-208ENST00000444533 PCF11O94913 1555 aaKnown RBP22.33■■□□□ 1.16
SSBP3-208ENST00000444533 EPRSP07814 1512 aaKnown RBP22.32■■□□□ 1.16
SSBP3-208ENST00000444533 DIP2BQ9P265 1576 aa22.31■■□□□ 1.16
SSBP3-208ENST00000444533 CDK13Q14004 1512 aaKnown RBP22.28■■□□□ 1.16
SSBP3-208ENST00000444533 VPS8Q8N3P4 1428 aa22.27■■□□□ 1.16
SSBP3-208ENST00000444533 KIF13AQ9H1H9 1805 aa22.26■■□□□ 1.15
SSBP3-208ENST00000444533 GLI2P10070 1586 aa22.25■■□□□ 1.15
SSBP3-208ENST00000444533 APLP2Q06481 763 aa22.22■■□□□ 1.15
SSBP3-208ENST00000444533 TROQ12816 1431 aaPredicted RBP22.17■■□□□ 1.14
SSBP3-208ENST00000444533 CD109Q6YHK3 1445 aa22.17■■□□□ 1.14
SSBP3-208ENST00000444533 TEX14Q8IWB6 1497 aa22.15■■□□□ 1.14
SSBP3-208ENST00000444533 CFAP43Q8NDM7 1665 aa22.15■■□□□ 1.14
SSBP3-208ENST00000444533 LRRIQ1Q96JM4 1722 aa22.14■■□□□ 1.14
SSBP3-208ENST00000444533 MTUS2Q5JR59 1369 aa22.14■■□□□ 1.14
SSBP3-208ENST00000444533 TSPOAP1O95153 1857 aa22.14■■□□□ 1.13
SSBP3-208ENST00000444533 MAP3K4Q9Y6R4 1608 aa22.13■■□□□ 1.13
SSBP3-208ENST00000444533 KIF14Q15058 1648 aa22.13■■□□□ 1.13
SSBP3-208ENST00000444533 ABCA9Q8IUA7 1624 aa22.12■■□□□ 1.13
SSBP3-208ENST00000444533 MAGI3Q5TCQ9 1506 aa22.07■■□□□ 1.12
SSBP3-208ENST00000444533 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.06■■□□□ 1.12
SSBP3-208ENST00000444533 TIAM1Q13009 1591 aa22.05■■□□□ 1.12
SSBP3-208ENST00000444533 MAP3K1Q13233 1512 aa22.04■■□□□ 1.12
SSBP3-208ENST00000444533 EHBP1L1Q8N3D4 1523 aa22.04■■□□□ 1.12
SSBP3-208ENST00000444533 PHLDB1Q86UU1 1377 aa22.02■■□□□ 1.12
SSBP3-208ENST00000444533 TTC37Q6PGP7 1564 aa22.01■■□□□ 1.11
SSBP3-208ENST00000444533 PPRC1Q5VV67 1664 aaKnown RBP21.99■■□□□ 1.11
SSBP3-208ENST00000444533 PLCH2O75038 1416 aa21.98■■□□□ 1.11
SSBP3-208ENST00000444533 EFCAB2Q5VUJ9 269 aa21.98■■□□□ 1.11
SSBP3-208ENST00000444533 CFAP74Q9C0B2 1584 aa21.98■■□□□ 1.11
SSBP3-208ENST00000444533 MYO5CQ9NQX4 1742 aa21.97■■□□□ 1.11
SSBP3-208ENST00000444533 NEO1Q92859 1461 aa21.97■■□□□ 1.11
SSBP3-208ENST00000444533 KDM6BO15054 1643 aa21.97■■□□□ 1.11
SSBP3-208ENST00000444533 CCNB3Q8WWL7 1395 aa21.97■■□□□ 1.11
SSBP3-208ENST00000444533 FANCAO15360 1455 aa21.96■■□□□ 1.11
SSBP3-208ENST00000444533 LRRC9Q6ZRR7 1453 aa21.96■■□□□ 1.11
SSBP3-208ENST00000444533 ARHGAP5Q13017 1502 aa21.95■■□□□ 1.1
SSBP3-208ENST00000444533 SUPT6HQ7KZ85 1726 aaKnown RBP21.94■■□□□ 1.1
SSBP3-208ENST00000444533 ARAP3Q8WWN8 1544 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms