RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 MAP3K1Q13233 1512 aa27.62■■■□□ 2.01
PMPCB-204ENST00000444457 TIAM1Q13009 1591 aa27.61■■■□□ 2.01
PMPCB-204ENST00000444457 SUPT16HQ9Y5B9 1047 aaKnown RBP27.59■■■□□ 2.01
PMPCB-204ENST00000444457 DHX57Q6P158 1386 aaKnown RBP27.58■■■□□ 2.01
PMPCB-204ENST00000444457 CCNB3Q8WWL7 1395 aa27.58■■■□□ 2.01
PMPCB-204ENST00000444457 LAMC3Q9Y6N6 1575 aa27.56■■■□□ 2
PMPCB-204ENST00000444457 ANP32EQ9BTT0 268 aa27.54■■■□□ 2
PMPCB-204ENST00000444457 CUL7Q14999 1698 aa27.53■■■□□ 2
PMPCB-204ENST00000444457 FHAD1B1AJZ9 1412 aa27.5■■□□□ 1.99
PMPCB-204ENST00000444457 WDR97A6NE52 1622 aa27.49■■□□□ 1.99
PMPCB-204ENST00000444457 CFAP43Q8NDM7 1665 aa27.48■■□□□ 1.99
PMPCB-204ENST00000444457 LRRC9Q6ZRR7 1453 aa27.47■■□□□ 1.99
PMPCB-204ENST00000444457 PCF11O94913 1555 aaKnown RBP27.47■■□□□ 1.99
PMPCB-204ENST00000444457 TSHZ2Q9NRE2 1034 aa27.46■■□□□ 1.99
PMPCB-204ENST00000444457 URB2Q14146 1524 aaKnown RBP27.46■■□□□ 1.99
PMPCB-204ENST00000444457 CTTNBP2Q8WZ74 1663 aa27.46■■□□□ 1.99
PMPCB-204ENST00000444457 EFCAB5A4FU69 1503 aa27.43■■□□□ 1.98
PMPCB-204ENST00000444457 BCL11AQ9H165 835 aa27.41■■□□□ 1.98
PMPCB-204ENST00000444457 FHOD3Q2V2M9 1422 aa27.37■■□□□ 1.97
PMPCB-204ENST00000444457 P3H3Q8IVL6 736 aa27.36■■□□□ 1.97
PMPCB-204ENST00000444457 ABCA5Q8WWZ7 1642 aa27.36■■□□□ 1.97
PMPCB-204ENST00000444457 FYCO1Q9BQS8 1478 aa27.35■■□□□ 1.97
PMPCB-204ENST00000444457 PHLDB1Q86UU1 1377 aa27.34■■□□□ 1.97
PMPCB-204ENST00000444457 ITGAEP38570 1179 aa27.33■■□□□ 1.97
PMPCB-204ENST00000444457 PDS5BQ9NTI5 1447 aa27.32■■□□□ 1.96
PMPCB-204ENST00000444457 AQRO60306 1485 aaKnown RBP eCLIP27.31■■□□□ 1.963e-6■■■□□ 17
PMPCB-204ENST00000444457 CASKIN1Q8WXD9 1431 aa27.29■■□□□ 1.96
PMPCB-204ENST00000444457 KIF21AQ7Z4S6 1674 aa27.29■■□□□ 1.96
PMPCB-204ENST00000444457 RAB3GAP2Q9H2M9 1393 aa27.27■■□□□ 1.96
PMPCB-204ENST00000444457 GAPVD1Q14C86 1478 aa27.25■■□□□ 1.95
PMPCB-204ENST00000444457 TDRD9Q8NDG6 1382 aaKnown RBP27.24■■□□□ 1.95
PMPCB-204ENST00000444457 ATP1B4Q9UN42 357 aaPredicted RBP27.22■■□□□ 1.95
PMPCB-204ENST00000444457 FMN1Q68DA7 1419 aa27.21■■□□□ 1.95
PMPCB-204ENST00000444457 SETD5Q9C0A6 1442 aa27.2■■□□□ 1.95
PMPCB-204ENST00000444457 SAMD9Q5K651 1589 aa27.2■■□□□ 1.94
PMPCB-204ENST00000444457 MAPKBP1O60336 1514 aa27.18■■□□□ 1.94
PMPCB-204ENST00000444457 SNAPC4Q5SXM2 1469 aa27.18■■□□□ 1.94
PMPCB-204ENST00000444457 FAM50AQ14320 339 aaKnown RBP27.15■■□□□ 1.94
PMPCB-204ENST00000444457 TARBP1Q13395 1621 aaKnown RBP27.15■■□□□ 1.94
PMPCB-204ENST00000444457 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.1■■□□□ 1.93
PMPCB-204ENST00000444457 LRRIQ1Q96JM4 1722 aa27.09■■□□□ 1.93
PMPCB-204ENST00000444457 PBRM1Q86U86 1689 aa27.05■■□□□ 1.92
PMPCB-204ENST00000444457 THOC2Q8NI27 1593 aaKnown RBP27.03■■□□□ 1.92
PMPCB-204ENST00000444457 GRIN2BQ13224 1484 aa27.03■■□□□ 1.92
PMPCB-204ENST00000444457 FGD6Q6ZV73 1430 aa27.02■■□□□ 1.92
PMPCB-204ENST00000444457 MTUS2Q5JR59 1369 aa27.01■■□□□ 1.91
PMPCB-204ENST00000444457 MRC2Q9UBG0 1479 aa26.93■■□□□ 1.9
PMPCB-204ENST00000444457 SUPT6HQ7KZ85 1726 aaKnown RBP26.93■■□□□ 1.9
PMPCB-204ENST00000444457 ADAMTS12P58397 1594 aa26.93■■□□□ 1.9
PMPCB-204ENST00000444457 EHBP1L1Q8N3D4 1523 aa26.92■■□□□ 1.9
PMPCB-204ENST00000444457 ERCC6Q03468 1493 aa26.92■■□□□ 1.9
PMPCB-204ENST00000444457 NCOA2Q15596 1464 aa26.91■■□□□ 1.9
PMPCB-204ENST00000444457 IQGAP2Q13576 1575 aa26.89■■□□□ 1.89
PMPCB-204ENST00000444457 MYOM3Q5VTT5 1437 aa26.87■■□□□ 1.89
PMPCB-204ENST00000444457 SIN3AQ96ST3 1273 aa26.86■■□□□ 1.89
PMPCB-204ENST00000444457 CCDC18Q5T9S5 1454 aa26.85■■□□□ 1.89
PMPCB-204ENST00000444457 HECW1Q76N89 1606 aa26.83■■□□□ 1.89
PMPCB-204ENST00000444457 UGGT2Q9NYU1 1516 aa26.83■■□□□ 1.89
PMPCB-204ENST00000444457 PTPRKQ15262 1439 aa26.83■■□□□ 1.89
PMPCB-204ENST00000444457 ARHGEF11O15085 1522 aa26.82■■□□□ 1.88
PMPCB-204ENST00000444457 HFM1A2PYH4 1435 aa26.82■■□□□ 1.88
PMPCB-204ENST00000444457 MAGI3Q5TCQ9 1506 aa26.82■■□□□ 1.88
PMPCB-204ENST00000444457 PTPN23Q9H3S7 1636 aa26.81■■□□□ 1.88
PMPCB-204ENST00000444457 BCANQ96GW7 911 aa26.8■■□□□ 1.88
PMPCB-204ENST00000444457 RBM19Q9Y4C8 960 aaKnown RBP26.8■■□□□ 1.88
PMPCB-204ENST00000444457 TIMELESSQ9UNS1 1208 aa26.8■■□□□ 1.88
PMPCB-204ENST00000444457 FKBP8Q14318 412 aa26.79■■□□□ 1.88
PMPCB-204ENST00000444457 KCNH8Q96L42 1107 aa26.78■■□□□ 1.88
PMPCB-204ENST00000444457 IFT140Q96RY7 1462 aa26.76■■□□□ 1.87
PMPCB-204ENST00000444457 WDR62O43379 1518 aa26.74■■□□□ 1.87
PMPCB-204ENST00000444457 UACAQ9BZF9 1416 aa26.73■■□□□ 1.87
PMPCB-204ENST00000444457 NAIPQ13075 1403 aa26.73■■□□□ 1.87
PMPCB-204ENST00000444457 EPRSP07814 1512 aaKnown RBP26.72■■□□□ 1.87
PMPCB-204ENST00000444457 ZNF608Q9ULD9 1512 aaPredicted RBP26.72■■□□□ 1.87
PMPCB-204ENST00000444457 TCOF1Q13428 1488 aaKnown RBP26.69■■□□□ 1.86
PMPCB-204ENST00000444457 CDK13Q14004 1512 aaKnown RBP26.67■■□□□ 1.86
PMPCB-204ENST00000444457 PPP1R15AO75807 674 aaPredicted RBP26.65■■□□□ 1.86
PMPCB-204ENST00000444457 GCC2Q8IWJ2 1684 aa26.63■■□□□ 1.85
PMPCB-204ENST00000444457 KIAA0556O60303 1618 aa26.61■■□□□ 1.85
PMPCB-204ENST00000444457 KIAA0586Q9BVV6 1533 aa26.61■■□□□ 1.85
PMPCB-204ENST00000444457 NEFLP07196 543 aa26.61■■□□□ 1.85
PMPCB-204ENST00000444457 EIF4G3O43432 1585 aaKnown RBP26.6■■□□□ 1.85
PMPCB-204ENST00000444457 TONSLQ96HA7 1378 aa26.59■■□□□ 1.85
PMPCB-204ENST00000444457 MIA2Q96PC5 1412 aa26.58■■□□□ 1.85
PMPCB-204ENST00000444457 DISP1Q96F81 1524 aa26.57■■□□□ 1.84
PMPCB-204ENST00000444457 MSH5O43196 834 aa26.56■■□□□ 1.84
PMPCB-204ENST00000444457 AKNAQ7Z591 1439 aa26.56■■□□□ 1.84
PMPCB-204ENST00000444457 GRIN2AQ12879 1464 aa26.55■■□□□ 1.84
PMPCB-204ENST00000444457 DDX10Q13206 875 aaKnown RBP26.5■■□□□ 1.83
PMPCB-204ENST00000444457 RRP7BPQ9NSQ0 103 aa26.5■■□□□ 1.83
PMPCB-204ENST00000444457 ARID3CA6NKF2 412 aa26.49■■□□□ 1.83
PMPCB-204ENST00000444457 RAPGEF6Q8TEU7 1601 aa26.49■■□□□ 1.83
PMPCB-204ENST00000444457 CHIC2Q9UKJ5 165 aa26.49■■□□□ 1.83
PMPCB-204ENST00000444457 FANCIQ9NVI1 1328 aa26.47■■□□□ 1.83
PMPCB-204ENST00000444457 NUP153P49790 1475 aaKnown RBP26.47■■□□□ 1.83
PMPCB-204ENST00000444457 KDM6BO15054 1643 aa26.47■■□□□ 1.83
PMPCB-204ENST00000444457 KDM5BQ9UGL1 1544 aa26.45■■□□□ 1.82
PMPCB-204ENST00000444457 MAGI1Q96QZ7 1491 aaPredicted RBP26.45■■□□□ 1.82
PMPCB-204ENST00000444457 HIRIP3Q9BW71 556 aaPredicted RBP26.43■■□□□ 1.82
PMPCB-204ENST00000444457 DENND4BO75064 1496 aaPredicted RBP26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms