RNA–Protein interactions for RNA: ENST00000444172.6

CIRBP-203, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-203ENST00000444172 KIAA0586Q9BVV6 1533 aa29.4■■■□□ 2.3
CIRBP-203ENST00000444172 JPH4Q96JJ6 628 aa29.37■■■□□ 2.29
CIRBP-203ENST00000444172 CTTNBP2Q8WZ74 1663 aa29.34■■■□□ 2.29
CIRBP-203ENST00000444172 IQGAP2Q13576 1575 aa29.31■■■□□ 2.28
CIRBP-203ENST00000444172 UBTFP17480 764 aaKnown RBP29.31■■■□□ 2.28
CIRBP-203ENST00000444172 ARHGEF11O15085 1522 aa29.3■■■□□ 2.28
CIRBP-203ENST00000444172 GOLGA3Q08378 1498 aa29.29■■■□□ 2.28
CIRBP-203ENST00000444172 SHROOM2Q13796 1616 aa29.29■■■□□ 2.28
CIRBP-203ENST00000444172 RIMBP3CA6NJZ7 1639 aa29.28■■■□□ 2.28
CIRBP-203ENST00000444172 RIMBP3BA6NNM3 1639 aa29.28■■■□□ 2.28
CIRBP-203ENST00000444172 RIMBP3Q9UFD9 1639 aa29.28■■■□□ 2.28
CIRBP-203ENST00000444172 PRG4Q92954 1404 aaPredicted RBP29.25■■■□□ 2.27
CIRBP-203ENST00000444172 ERCC6L2Q5T890 1561 aa29.2■■■□□ 2.26
CIRBP-203ENST00000444172 RANGAP1P46060 587 aaPredicted RBP29.19■■■□□ 2.26
CIRBP-203ENST00000444172 UGGT2Q9NYU1 1516 aa29.13■■■□□ 2.25
CIRBP-203ENST00000444172 CARMIL2Q6F5E8 1435 aa29.11■■■□□ 2.25
CIRBP-203ENST00000444172 CYB5RLQ6IPT4 315 aa29.11■■■□□ 2.25
CIRBP-203ENST00000444172 LOC105371045A0A1W2PR82 267 aa29.09■■■□□ 2.25
CIRBP-203ENST00000444172 ARAP1Q96P48 1450 aa29.09■■■□□ 2.25
CIRBP-203ENST00000444172 TTBK1Q5TCY1 1321 aaPredicted RBP29.07■■■□□ 2.24
CIRBP-203ENST00000444172 DISP1Q96F81 1524 aa29.06■■■□□ 2.24
CIRBP-203ENST00000444172 P3H3Q8IVL6 736 aa29.03■■■□□ 2.24
CIRBP-203ENST00000444172 KIAA0556O60303 1618 aa29.02■■■□□ 2.24
CIRBP-203ENST00000444172 TNIKQ9UKE5 1360 aa28.99■■■□□ 2.23
CIRBP-203ENST00000444172 PTPRGP23470 1445 aa28.95■■■□□ 2.23
CIRBP-203ENST00000444172 SAMD9Q5K651 1589 aa28.92■■■□□ 2.22
CIRBP-203ENST00000444172 EFCAB5A4FU69 1503 aa28.87■■■□□ 2.21
CIRBP-203ENST00000444172 FHOD3Q2V2M9 1422 aa28.85■■■□□ 2.21
CIRBP-203ENST00000444172 ARHGAP35Q9NRY4 1499 aa28.82■■■□□ 2.2
CIRBP-203ENST00000444172 CLIP1P30622 1438 aa28.8■■■□□ 2.2
CIRBP-203ENST00000444172 CEP162Q5TB80 1403 aa28.76■■■□□ 2.19
CIRBP-203ENST00000444172 UACAQ9BZF9 1416 aa28.76■■■□□ 2.19
CIRBP-203ENST00000444172 ADCY10Q96PN6 1610 aa28.72■■■□□ 2.19
CIRBP-203ENST00000444172 PLB1Q6P1J6 1458 aa28.72■■■□□ 2.19
CIRBP-203ENST00000444172 NPM1P06748 294 aaKnown RBP eCLIP28.7■■■□□ 2.18
CIRBP-203ENST00000444172 ABCC2Q92887 1545 aa28.66■■■□□ 2.18
CIRBP-203ENST00000444172 ABCA8O94911 1581 aa28.66■■■□□ 2.18
CIRBP-203ENST00000444172 UHRF1BP1LA0JNW5 1464 aa28.66■■■□□ 2.18
CIRBP-203ENST00000444172 FMN1Q68DA7 1419 aa28.64■■■□□ 2.18
CIRBP-203ENST00000444172 RAPGEF6Q8TEU7 1601 aa28.62■■■□□ 2.17
CIRBP-203ENST00000444172 ATP1B4Q9UN42 357 aaPredicted RBP28.61■■■□□ 2.17
CIRBP-203ENST00000444172 ARID3CA6NKF2 412 aa28.6■■■□□ 2.17
CIRBP-203ENST00000444172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.53■■■□□ 2.16
CIRBP-203ENST00000444172 HNRNPUL2Q1KMD3 747 aaKnown RBP28.53■■■□□ 2.16
CIRBP-203ENST00000444172 ZCCHC11Q5TAX3 1644 aaKnown RBP28.52■■■□□ 2.16
CIRBP-203ENST00000444172 KDM5BQ9UGL1 1544 aa28.52■■■□□ 2.16
CIRBP-203ENST00000444172 NUP153P49790 1475 aaKnown RBP28.49■■■□□ 2.15
CIRBP-203ENST00000444172 HECW1Q76N89 1606 aa28.47■■■□□ 2.15
CIRBP-203ENST00000444172 ATP10BO94823 1461 aa28.46■■■□□ 2.15
CIRBP-203ENST00000444172 PCF11O94913 1555 aaKnown RBP28.45■■■□□ 2.15
CIRBP-203ENST00000444172 TRHP20396 242 aaPredicted RBP28.45■■■□□ 2.14
CIRBP-203ENST00000444172 CASKIN1Q8WXD9 1431 aa28.44■■■□□ 2.14
CIRBP-203ENST00000444172 MAPKBP1O60336 1514 aa28.43■■■□□ 2.14
CIRBP-203ENST00000444172 ASXL2Q76L83 1435 aa28.42■■■□□ 2.14
CIRBP-203ENST00000444172 FYCO1Q9BQS8 1478 aa28.38■■■□□ 2.13
CIRBP-203ENST00000444172 CDK13Q14004 1512 aaKnown RBP28.38■■■□□ 2.13
CIRBP-203ENST00000444172 VPS8Q8N3P4 1428 aa28.37■■■□□ 2.13
CIRBP-203ENST00000444172 EPRSP07814 1512 aaKnown RBP28.37■■■□□ 2.13
CIRBP-203ENST00000444172 LRRIQ1Q96JM4 1722 aa28.35■■■□□ 2.13
CIRBP-203ENST00000444172 KCNH8Q96L42 1107 aa28.34■■■□□ 2.13
CIRBP-203ENST00000444172 PLEKHD1A6NEE1 506 aa28.33■■■□□ 2.13
CIRBP-203ENST00000444172 WDR7Q9Y4E6 1490 aa28.31■■■□□ 2.12
CIRBP-203ENST00000444172 FAM69CQ0P6D2 419 aa28.3■■■□□ 2.12
CIRBP-203ENST00000444172 CDK11AQ9UQ88 783 aaPredicted RBP28.29■■■□□ 2.12
CIRBP-203ENST00000444172 CCDC18Q5T9S5 1454 aa28.28■■■□□ 2.12
CIRBP-203ENST00000444172 ABCC10Q5T3U5 1492 aa28.27■■■□□ 2.12
CIRBP-203ENST00000444172 KIF13AQ9H1H9 1805 aa28.25■■■□□ 2.11
CIRBP-203ENST00000444172 DIP2BQ9P265 1576 aa28.24■■■□□ 2.11
CIRBP-203ENST00000444172 APLP2Q06481 763 aa28.17■■■□□ 2.1
CIRBP-203ENST00000444172 GLI2P10070 1586 aa28.14■■■□□ 2.1
CIRBP-203ENST00000444172 TROQ12816 1431 aaPredicted RBP28.13■■■□□ 2.09
CIRBP-203ENST00000444172 TSPOAP1O95153 1857 aa28.12■■■□□ 2.09
CIRBP-203ENST00000444172 MAGI3Q5TCQ9 1506 aa28.11■■■□□ 2.09
CIRBP-203ENST00000444172 TIAM1Q13009 1591 aa28.1■■■□□ 2.09
CIRBP-203ENST00000444172 MTUS2Q5JR59 1369 aa28.1■■■□□ 2.09
CIRBP-203ENST00000444172 CFAP43Q8NDM7 1665 aa28.1■■■□□ 2.09
CIRBP-203ENST00000444172 CD109Q6YHK3 1445 aa28.05■■■□□ 2.08
CIRBP-203ENST00000444172 MAP3K4Q9Y6R4 1608 aa28.05■■■□□ 2.08
CIRBP-203ENST00000444172 KIF14Q15058 1648 aa28.04■■■□□ 2.08
CIRBP-203ENST00000444172 ABCA9Q8IUA7 1624 aa28.03■■■□□ 2.08
CIRBP-203ENST00000444172 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.03■■■□□ 2.08
CIRBP-203ENST00000444172 MAP3K1Q13233 1512 aa28.02■■■□□ 2.08
CIRBP-203ENST00000444172 KANK4Q5T7N3 995 aaPredicted RBP28.01■■■□□ 2.07
CIRBP-203ENST00000444172 EHBP1L1Q8N3D4 1523 aa27.99■■■□□ 2.07
CIRBP-203ENST00000444172 TTC37Q6PGP7 1564 aa27.99■■■□□ 2.07
CIRBP-203ENST00000444172 LRRC9Q6ZRR7 1453 aa27.98■■■□□ 2.07
CIRBP-203ENST00000444172 PPRC1Q5VV67 1664 aaKnown RBP27.95■■■□□ 2.07
CIRBP-203ENST00000444172 TEX14Q8IWB6 1497 aa27.91■■■□□ 2.06
CIRBP-203ENST00000444172 SUPT6HQ7KZ85 1726 aaKnown RBP27.91■■■□□ 2.06
CIRBP-203ENST00000444172 MYO5CQ9NQX4 1742 aa27.9■■■□□ 2.06
CIRBP-203ENST00000444172 CCNB3Q8WWL7 1395 aa27.87■■■□□ 2.05
CIRBP-203ENST00000444172 PLCH2O75038 1416 aa27.87■■■□□ 2.05
CIRBP-203ENST00000444172 PPARGC1BQ86YN6 1023 aaKnown RBP27.86■■■□□ 2.05
CIRBP-203ENST00000444172 NCOA2Q15596 1464 aa27.85■■■□□ 2.05
CIRBP-203ENST00000444172 CDC42BPAQ5VT25 1732 aa27.83■■■□□ 2.05
CIRBP-203ENST00000444172 ARHGAP5Q13017 1502 aa27.82■■■□□ 2.04
CIRBP-203ENST00000444172 CDC42BPBQ9Y5S2 1711 aa27.81■■■□□ 2.04
CIRBP-203ENST00000444172 EFCAB2Q5VUJ9 269 aa27.81■■■□□ 2.04
CIRBP-203ENST00000444172 FANCAO15360 1455 aa27.81■■■□□ 2.04
CIRBP-203ENST00000444172 GPATCH8Q9UKJ3 1502 aaKnown RBP27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms