RNA–Protein interactions for RNA: ENST00000443980.6

NECAP2-202, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 2 BASIC

Gene NECAP2, Length 1,929 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-202ENST00000443980 ZNF316A6NFI3 1004 aaPredicted RBP20.64■□□□□ 0.89
NECAP2-202ENST00000443980 NEUROD1Q13562 356 aa20.63■□□□□ 0.89
NECAP2-202ENST00000443980 VPS8Q8N3P4 1428 aa20.61■□□□□ 0.89
NECAP2-202ENST00000443980 RANGAP1P46060 587 aaPredicted RBP20.57■□□□□ 0.88
NECAP2-202ENST00000443980 APLP2Q06481 763 aa20.55■□□□□ 0.88
NECAP2-202ENST00000443980 AQRO60306 1485 aaKnown RBP eCLIP20.55■□□□□ 0.883e-7■■■■□ 19.8
NECAP2-202ENST00000443980 GRIN2BQ13224 1484 aa20.55■□□□□ 0.88
NECAP2-202ENST00000443980 PBRM1Q86U86 1689 aa20.54■□□□□ 0.88
NECAP2-202ENST00000443980 ARAP1Q96P48 1450 aa20.54■□□□□ 0.88
NECAP2-202ENST00000443980 ZNF608Q9ULD9 1512 aaPredicted RBP20.52■□□□□ 0.87
NECAP2-202ENST00000443980 ARHGAP35Q9NRY4 1499 aa20.51■□□□□ 0.87
NECAP2-202ENST00000443980 FHAD1B1AJZ9 1412 aa20.51■□□□□ 0.87
NECAP2-202ENST00000443980 HNRNPUL2Q1KMD3 747 aaKnown RBP20.47■□□□□ 0.87
NECAP2-202ENST00000443980 ADAMTS12P58397 1594 aa20.47■□□□□ 0.87
NECAP2-202ENST00000443980 CTTNBP2Q8WZ74 1663 aa20.46■□□□□ 0.87
NECAP2-202ENST00000443980 GTF3C3Q9Y5Q9 886 aa20.46■□□□□ 0.87
NECAP2-202ENST00000443980 EIF4G3O43432 1585 aaKnown RBP20.45■□□□□ 0.86
NECAP2-202ENST00000443980 EFCAB5A4FU69 1503 aa20.41■□□□□ 0.86
NECAP2-202ENST00000443980 SNAPC4Q5SXM2 1469 aa20.38■□□□□ 0.85
NECAP2-202ENST00000443980 CLSPNQ9HAW4 1339 aa20.37■□□□□ 0.85
NECAP2-202ENST00000443980 MAGI1Q96QZ7 1491 aaPredicted RBP20.36■□□□□ 0.85
NECAP2-202ENST00000443980 SAMD9Q5K651 1589 aa20.29■□□□□ 0.84
NECAP2-202ENST00000443980 SYNJ2O15056 1496 aa20.28■□□□□ 0.84
NECAP2-202ENST00000443980 GRIN2AQ12879 1464 aa20.28■□□□□ 0.84
NECAP2-202ENST00000443980 IQGAP2Q13576 1575 aa20.27■□□□□ 0.84
NECAP2-202ENST00000443980 FHOD3Q2V2M9 1422 aa20.27■□□□□ 0.84
NECAP2-202ENST00000443980 MIER1Q8N108 512 aa20.26■□□□□ 0.83
NECAP2-202ENST00000443980 MAP3K1Q13233 1512 aa20.25■□□□□ 0.83
NECAP2-202ENST00000443980 P3H3Q8IVL6 736 aa20.25■□□□□ 0.83
NECAP2-202ENST00000443980 FMN1Q68DA7 1419 aa20.24■□□□□ 0.83
NECAP2-202ENST00000443980 KIAA0586Q9BVV6 1533 aa20.23■□□□□ 0.83
NECAP2-202ENST00000443980 CHMP7Q8WUX9 453 aaPredicted RBP20.22■□□□□ 0.83
NECAP2-202ENST00000443980 FYCO1Q9BQS8 1478 aa20.2■□□□□ 0.82
NECAP2-202ENST00000443980 CASKIN1Q8WXD9 1431 aa20.2■□□□□ 0.82
NECAP2-202ENST00000443980 UGGT2Q9NYU1 1516 aa20.2■□□□□ 0.82
NECAP2-202ENST00000443980 PCF11O94913 1555 aaKnown RBP20.19■□□□□ 0.82
NECAP2-202ENST00000443980 DHX57Q6P158 1386 aaKnown RBP20.18■□□□□ 0.82
NECAP2-202ENST00000443980 RRBP1Q9P2E9 1410 aaKnown RBP20.17■□□□□ 0.82
NECAP2-202ENST00000443980 TIAM1Q13009 1591 aa20.17■□□□□ 0.82
NECAP2-202ENST00000443980 YTHDC1Q96MU7 727 aaKnown RBP20.17■□□□□ 0.82
NECAP2-202ENST00000443980 KANK4Q5T7N3 995 aaPredicted RBP20.16■□□□□ 0.82
NECAP2-202ENST00000443980 NUP160Q12769 1436 aa20.14■□□□□ 0.82
NECAP2-202ENST00000443980 CEP170Q5SW79 1584 aa20.13■□□□□ 0.81
NECAP2-202ENST00000443980 FBLN2P98095 1184 aa20.12■□□□□ 0.81
NECAP2-202ENST00000443980 CFAP43Q8NDM7 1665 aa20.11■□□□□ 0.81
NECAP2-202ENST00000443980 LRRC9Q6ZRR7 1453 aa20.09■□□□□ 0.81
NECAP2-202ENST00000443980 ATP1B4Q9UN42 357 aaPredicted RBP20.07■□□□□ 0.8
NECAP2-202ENST00000443980 DISP1Q96F81 1524 aa20.06■□□□□ 0.8
NECAP2-202ENST00000443980 MYT1Q01538 1121 aa20.06■□□□□ 0.8
NECAP2-202ENST00000443980 KIAA0556O60303 1618 aa20.05■□□□□ 0.8
NECAP2-202ENST00000443980 CCNB3Q8WWL7 1395 aa20.05■□□□□ 0.8
NECAP2-202ENST00000443980 HECW1Q76N89 1606 aa19.99■□□□□ 0.79
NECAP2-202ENST00000443980 JPH4Q96JJ6 628 aa19.99■□□□□ 0.79
NECAP2-202ENST00000443980 CCDC18Q5T9S5 1454 aa19.99■□□□□ 0.79
NECAP2-202ENST00000443980 CARMIL2Q6F5E8 1435 aa19.98■□□□□ 0.79
NECAP2-202ENST00000443980 CHD1O14646 1710 aa19.95■□□□□ 0.78
NECAP2-202ENST00000443980 LRRIQ1Q96JM4 1722 aa19.93■□□□□ 0.78
NECAP2-202ENST00000443980 MTUS2Q5JR59 1369 aa19.92■□□□□ 0.78
NECAP2-202ENST00000443980 EPRSP07814 1512 aaKnown RBP19.91■□□□□ 0.78
NECAP2-202ENST00000443980 PHLDB1Q86UU1 1377 aa19.9■□□□□ 0.78
NECAP2-202ENST00000443980 EHBP1L1Q8N3D4 1523 aa19.89■□□□□ 0.77
NECAP2-202ENST00000443980 RAPGEF6Q8TEU7 1601 aa19.87■□□□□ 0.77
NECAP2-202ENST00000443980 RAB3GAP2Q9H2M9 1393 aa19.85■□□□□ 0.77
NECAP2-202ENST00000443980 PRG4Q92954 1404 aaPredicted RBP19.84■□□□□ 0.77
NECAP2-202ENST00000443980 NUP153P49790 1475 aaKnown RBP19.84■□□□□ 0.77
NECAP2-202ENST00000443980 SETD5Q9C0A6 1442 aa19.83■□□□□ 0.77
NECAP2-202ENST00000443980 SHROOM2Q13796 1616 aa19.83■□□□□ 0.77
NECAP2-202ENST00000443980 SUPT6HQ7KZ85 1726 aaKnown RBP19.82■□□□□ 0.76
NECAP2-202ENST00000443980 CDK13Q14004 1512 aaKnown RBP19.82■□□□□ 0.76
NECAP2-202ENST00000443980 ITGAEP38570 1179 aa19.81■□□□□ 0.76
NECAP2-202ENST00000443980 NCOA2Q15596 1464 aa19.81■□□□□ 0.76
NECAP2-202ENST00000443980 MAGI3Q5TCQ9 1506 aa19.81■□□□□ 0.76
NECAP2-202ENST00000443980 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.81■□□□□ 0.76
NECAP2-202ENST00000443980 PLB1Q6P1J6 1458 aa19.8■□□□□ 0.76
NECAP2-202ENST00000443980 ARHGEF11O15085 1522 aa19.79■□□□□ 0.76
NECAP2-202ENST00000443980 MAPKBP1O60336 1514 aa19.78■□□□□ 0.76
NECAP2-202ENST00000443980 CLASP1Q7Z460 1538 aa19.77■□□□□ 0.76
NECAP2-202ENST00000443980 TIMELESSQ9UNS1 1208 aa19.77■□□□□ 0.76
NECAP2-202ENST00000443980 CDK11AQ9UQ88 783 aaPredicted RBP19.77■□□□□ 0.76
NECAP2-202ENST00000443980 FGD6Q6ZV73 1430 aa19.77■□□□□ 0.76
NECAP2-202ENST00000443980 ABCA8O94911 1581 aa19.77■□□□□ 0.76
NECAP2-202ENST00000443980 MYOM3Q5VTT5 1437 aa19.76■□□□□ 0.75
NECAP2-202ENST00000443980 PTPRGP23470 1445 aa19.75■□□□□ 0.75
NECAP2-202ENST00000443980 FAM50AQ14320 339 aaKnown RBP19.73■□□□□ 0.75
NECAP2-202ENST00000443980 ARID3CA6NKF2 412 aa19.72■□□□□ 0.75
NECAP2-202ENST00000443980 SUPT16HQ9Y5B9 1047 aaKnown RBP19.7■□□□□ 0.74
NECAP2-202ENST00000443980 TROQ12816 1431 aaPredicted RBP19.67■□□□□ 0.74
NECAP2-202ENST00000443980 MIA2Q96PC5 1412 aa19.66■□□□□ 0.74
NECAP2-202ENST00000443980 UACAQ9BZF9 1416 aa19.65■□□□□ 0.74
NECAP2-202ENST00000443980 ATP10BO94823 1461 aa19.64■□□□□ 0.74
NECAP2-202ENST00000443980 TCOF1Q13428 1488 aaKnown RBP19.64■□□□□ 0.73
NECAP2-202ENST00000443980 ERCC6L2Q5T890 1561 aa19.63■□□□□ 0.73
NECAP2-202ENST00000443980 PTPN23Q9H3S7 1636 aa19.63■□□□□ 0.73
NECAP2-202ENST00000443980 ADCY10Q96PN6 1610 aa19.6■□□□□ 0.73
NECAP2-202ENST00000443980 PLEKHD1A6NEE1 506 aa19.59■□□□□ 0.73
NECAP2-202ENST00000443980 SIN3AQ96ST3 1273 aa19.58■□□□□ 0.72
NECAP2-202ENST00000443980 ABCC2Q92887 1545 aa19.57■□□□□ 0.72
NECAP2-202ENST00000443980 PPP1R15AO75807 674 aaPredicted RBP19.55■□□□□ 0.72
NECAP2-202ENST00000443980 OSCARQ8IYS5 282 aa19.55■□□□□ 0.72
NECAP2-202ENST00000443980 UHRF1BP1LA0JNW5 1464 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms