RNA–Protein interactions for RNA: ENST00000443824.5

CTPS2-203, Transcript of CTP synthase 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTPS2, Length 4,319 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-203ENST00000443824 JPH4Q96JJ6 628 aa17.32■□□□□ 0.36
CTPS2-203ENST00000443824 FHOD3Q2V2M9 1422 aa17.32■□□□□ 0.36
CTPS2-203ENST00000443824 TSPY4P0CV99 314 aa17.31■□□□□ 0.36
CTPS2-203ENST00000443824 TSPY10P0CW01 314 aa17.31■□□□□ 0.36
CTPS2-203ENST00000443824 CFDP1Q9UEE9 299 aaPredicted RBP17.3■□□□□ 0.36
CTPS2-203ENST00000443824 DIEXFQ68CQ4 756 aaKnown RBP17.3■□□□□ 0.36
CTPS2-203ENST00000443824 VPS8Q8N3P4 1428 aa17.28■□□□□ 0.36
CTPS2-203ENST00000443824 GAPVD1Q14C86 1478 aa17.27■□□□□ 0.36
CTPS2-203ENST00000443824 CUX1P39880 1505 aa17.27■□□□□ 0.35
CTPS2-203ENST00000443824 SLC4A1APQ9BWU0 796 aaKnown RBP17.23■□□□□ 0.35
CTPS2-203ENST00000443824 SENP3Q9H4L4 574 aaPredicted RBP17.23■□□□□ 0.35
CTPS2-203ENST00000443824 FHAD1B1AJZ9 1412 aa17.21■□□□□ 0.35
CTPS2-203ENST00000443824 TOPBP1Q92547 1522 aa17.21■□□□□ 0.34
CTPS2-203ENST00000443824 CENPBP07199 599 aaPredicted RBP17.2■□□□□ 0.34
CTPS2-203ENST00000443824 CHGAP10645 457 aaKnown RBP17.2■□□□□ 0.34
CTPS2-203ENST00000443824 HIRIP3Q9BW71 556 aaPredicted RBP17.19■□□□□ 0.34
CTPS2-203ENST00000443824 PEG3Q9GZU2 1588 aa17.19■□□□□ 0.34
CTPS2-203ENST00000443824 POLA1P09884 1462 aaPredicted RBP17.19■□□□□ 0.34
CTPS2-203ENST00000443824 ZNF316A6NFI3 1004 aaPredicted RBP17.14■□□□□ 0.33
CTPS2-203ENST00000443824 KDM2AQ9Y2K7 1162 aa17.14■□□□□ 0.33
CTPS2-203ENST00000443824 CCNB3Q8WWL7 1395 aa17.13■□□□□ 0.33
CTPS2-203ENST00000443824 CARMIL2Q6F5E8 1435 aa17.12■□□□□ 0.33
CTPS2-203ENST00000443824 SIN3AQ96ST3 1273 aa17.12■□□□□ 0.33
CTPS2-203ENST00000443824 MRC2Q9UBG0 1479 aa17.1■□□□□ 0.33
CTPS2-203ENST00000443824 TOP2BQ02880 1626 aa17.09■□□□□ 0.33
CTPS2-203ENST00000443824 TONSLQ96HA7 1378 aa17.09■□□□□ 0.33
CTPS2-203ENST00000443824 CYB5RLQ6IPT4 315 aa17.09■□□□□ 0.33
CTPS2-203ENST00000443824 BCANQ96GW7 911 aa17.08■□□□□ 0.33
CTPS2-203ENST00000443824 FMN1Q68DA7 1419 aa17.07■□□□□ 0.32
CTPS2-203ENST00000443824 ESF1Q9H501 851 aaKnown RBP17.06■□□□□ 0.32
CTPS2-203ENST00000443824 RGL3Q3MIN7 710 aa17.05■□□□□ 0.32
CTPS2-203ENST00000443824 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
CTPS2-203ENST00000443824 TRHP20396 242 aaPredicted RBP17.02■□□□□ 0.32
CTPS2-203ENST00000443824 FOXD1Q16676 465 aa17.02■□□□□ 0.32
CTPS2-203ENST00000443824 URB2Q14146 1524 aaKnown RBP17.02■□□□□ 0.31
CTPS2-203ENST00000443824 GRIN2BQ13224 1484 aa17■□□□□ 0.31
CTPS2-203ENST00000443824 PRXQ9BXM0 1461 aa17■□□□□ 0.31
CTPS2-203ENST00000443824 HNRNPMP52272 730 aaKnown RBP eCLIP17■□□□□ 0.311e-7■■■□□ 14.8
CTPS2-203ENST00000443824 STAG3Q9UJ98 1225 aa17■□□□□ 0.31
CTPS2-203ENST00000443824 PTPRGP23470 1445 aa16.99■□□□□ 0.31
CTPS2-203ENST00000443824 LAMC3Q9Y6N6 1575 aa16.99■□□□□ 0.31
CTPS2-203ENST00000443824 DDX10Q13206 875 aaKnown RBP16.99■□□□□ 0.31
CTPS2-203ENST00000443824 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
CTPS2-203ENST00000443824 ARAP1Q96P48 1450 aa16.96■□□□□ 0.31
CTPS2-203ENST00000443824 ZNF608Q9ULD9 1512 aaPredicted RBP16.96■□□□□ 0.31
CTPS2-203ENST00000443824 ARHGAP35Q9NRY4 1499 aa16.96■□□□□ 0.31
CTPS2-203ENST00000443824 KIF21BO75037 1637 aa16.94■□□□□ 0.3
CTPS2-203ENST00000443824 IFT140Q96RY7 1462 aa16.94■□□□□ 0.3
CTPS2-203ENST00000443824 SNAPC4Q5SXM2 1469 aa16.93■□□□□ 0.3
CTPS2-203ENST00000443824 MLECQ14165 292 aa16.92■□□□□ 0.3
CTPS2-203ENST00000443824 ARID4BQ4LE39 1312 aaPredicted RBP16.92■□□□□ 0.3
CTPS2-203ENST00000443824 ZNF644Q9H582 1327 aaPredicted RBP16.92■□□□□ 0.3
CTPS2-203ENST00000443824 ABCA10Q8WWZ4 1543 aa16.88■□□□□ 0.29
CTPS2-203ENST00000443824 ANP32CO43423 234 aa16.88■□□□□ 0.29
CTPS2-203ENST00000443824 GGT6Q6P531 493 aa16.87■□□□□ 0.29
CTPS2-203ENST00000443824 EFCAB2Q5VUJ9 269 aa16.87■□□□□ 0.29
CTPS2-203ENST00000443824 RAB3GAP2Q9H2M9 1393 aa16.86■□□□□ 0.29
CTPS2-203ENST00000443824 PRG4Q92954 1404 aaPredicted RBP16.83■□□□□ 0.29
CTPS2-203ENST00000443824 SETD5Q9C0A6 1442 aa16.83■□□□□ 0.28
CTPS2-203ENST00000443824 NEFLP07196 543 aa16.82■□□□□ 0.28
CTPS2-203ENST00000443824 PHLDB1Q86UU1 1377 aa16.81■□□□□ 0.28
CTPS2-203ENST00000443824 PKD2Q13563 968 aa16.81■□□□□ 0.28
CTPS2-203ENST00000443824 ERICH3Q5RHP9 1530 aa16.81■□□□□ 0.28
CTPS2-203ENST00000443824 PELP1Q8IZL8 1130 aaKnown RBP16.77■□□□□ 0.28
CTPS2-203ENST00000443824 MPHOSPH9Q99550 1183 aa16.76■□□□□ 0.27
CTPS2-203ENST00000443824 CCDC18Q5T9S5 1454 aa16.76■□□□□ 0.27
CTPS2-203ENST00000443824 KIF3BO15066 747 aa16.75■□□□□ 0.27
CTPS2-203ENST00000443824 MIER1Q8N108 512 aa16.75■□□□□ 0.27
CTPS2-203ENST00000443824 PRDM2Q13029 1718 aa16.74■□□□□ 0.27
CTPS2-203ENST00000443824 DCAF11Q8TEB1 546 aa16.74■□□□□ 0.27
CTPS2-203ENST00000443824 NUP155O75694 1391 aa16.74■□□□□ 0.27
CTPS2-203ENST00000443824 EIF4G2P78344 907 aaKnown RBP eCLIP16.72■□□□□ 0.27
CTPS2-203ENST00000443824 SENP3-EIF4A1A0A087X0R7 540 aa16.72■□□□□ 0.27
CTPS2-203ENST00000443824 SPAG9O60271 1321 aaKnown RBP16.71■□□□□ 0.27
CTPS2-203ENST00000443824 BIVM-ERCC5R4GMW8 1640 aa16.7■□□□□ 0.26
CTPS2-203ENST00000443824 CASKIN1Q8WXD9 1431 aa16.7■□□□□ 0.26
CTPS2-203ENST00000443824 LRRC9Q6ZRR7 1453 aa16.7■□□□□ 0.26
CTPS2-203ENST00000443824 FAM69CQ0P6D2 419 aa16.68■□□□□ 0.26
CTPS2-203ENST00000443824 AFAP1Q8N556 730 aa16.67■□□□□ 0.26
CTPS2-203ENST00000443824 PPP1R15AO75807 674 aaPredicted RBP16.67■□□□□ 0.26
CTPS2-203ENST00000443824 CARD11Q9BXL7 1154 aa16.67■□□□□ 0.26
CTPS2-203ENST00000443824 ANKRD30AQ9BXX3 1397 aa16.67■□□□□ 0.26
CTPS2-203ENST00000443824 SALL2Q9Y467 1007 aaPredicted RBP16.66■□□□□ 0.26
CTPS2-203ENST00000443824 KIAA0586Q9BVV6 1533 aa16.66■□□□□ 0.26
CTPS2-203ENST00000443824 FAM9BQ8IZU0 186 aa16.65■□□□□ 0.26
CTPS2-203ENST00000443824 GRIN2AQ12879 1464 aa16.65■□□□□ 0.26
CTPS2-203ENST00000443824 PLEKHG5O94827 1062 aa16.64■□□□□ 0.26
CTPS2-203ENST00000443824 KIF21AQ7Z4S6 1674 aa16.64■□□□□ 0.25
CTPS2-203ENST00000443824 SYNJ2O15056 1496 aa16.64■□□□□ 0.25
CTPS2-203ENST00000443824 FGD6Q6ZV73 1430 aa16.63■□□□□ 0.25
CTPS2-203ENST00000443824 NCOA2Q15596 1464 aa16.62■□□□□ 0.25
CTPS2-203ENST00000443824 NUTM2DQ5VT03 806 aaPredicted RBP16.62■□□□□ 0.25
CTPS2-203ENST00000443824 PLB1Q6P1J6 1458 aa16.62■□□□□ 0.25
CTPS2-203ENST00000443824 L3MBTL2Q969R5 705 aa16.61■□□□□ 0.25
CTPS2-203ENST00000443824 CDK13Q14004 1512 aaKnown RBP16.6■□□□□ 0.25
CTPS2-203ENST00000443824 MYOM3Q5VTT5 1437 aa16.6■□□□□ 0.25
CTPS2-203ENST00000443824 DHX57Q6P158 1386 aaKnown RBP16.6■□□□□ 0.25
CTPS2-203ENST00000443824 CLSPNQ9HAW4 1339 aa16.59■□□□□ 0.25
CTPS2-203ENST00000443824 TMC1Q8TDI8 760 aa16.58■□□□□ 0.25
CTPS2-203ENST00000443824 SAFB2Q14151 953 aaKnown RBP eCLIP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms