RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 SHROOM2Q13796 1616 aa17.49■□□□□ 0.39
HLA-DQB1-206ENST00000443574 IGF1RP08069 1367 aa17.49■□□□□ 0.39
HLA-DQB1-206ENST00000443574 CARMIL1Q5VZK9 1371 aa17.44■□□□□ 0.38
HLA-DQB1-206ENST00000443574 ARAP1Q96P48 1450 aa17.42■□□□□ 0.38
HLA-DQB1-206ENST00000443574 CTTNBP2Q8WZ74 1663 aa17.41■□□□□ 0.38
HLA-DQB1-206ENST00000443574 RAPGEF2Q9Y4G8 1499 aa17.4■□□□□ 0.38
HLA-DQB1-206ENST00000443574 EEA1Q15075 1411 aa17.39■□□□□ 0.38
HLA-DQB1-206ENST00000443574 KIAA0586Q9BVV6 1533 aa17.38■□□□□ 0.37
HLA-DQB1-206ENST00000443574 IQGAP2Q13576 1575 aa17.37■□□□□ 0.37
HLA-DQB1-206ENST00000443574 ERCC6L2Q5T890 1561 aa17.33■□□□□ 0.37
HLA-DQB1-206ENST00000443574 PRG4Q92954 1404 aaPredicted RBP17.31■□□□□ 0.36
HLA-DQB1-206ENST00000443574 CYB5RLQ6IPT4 315 aa17.31■□□□□ 0.36
HLA-DQB1-206ENST00000443574 PRXQ9BXM0 1461 aa17.3■□□□□ 0.36
HLA-DQB1-206ENST00000443574 JPH4Q96JJ6 628 aa17.28■□□□□ 0.36
HLA-DQB1-206ENST00000443574 KIF21BO75037 1637 aa17.25■□□□□ 0.35
HLA-DQB1-206ENST00000443574 CARMIL2Q6F5E8 1435 aa17.24■□□□□ 0.35
HLA-DQB1-206ENST00000443574 CSRNP3Q8WYN3 585 aa17.23■□□□□ 0.35
HLA-DQB1-206ENST00000443574 UGGT2Q9NYU1 1516 aa17.22■□□□□ 0.35
HLA-DQB1-206ENST00000443574 KIAA0556O60303 1618 aa17.2■□□□□ 0.34
HLA-DQB1-206ENST00000443574 GOLGA3Q08378 1498 aa17.17■□□□□ 0.34
HLA-DQB1-206ENST00000443574 FAM9AQ8IZU1 332 aaPredicted RBP17.14■□□□□ 0.33
HLA-DQB1-206ENST00000443574 DISP1Q96F81 1524 aa17.14■□□□□ 0.33
HLA-DQB1-206ENST00000443574 TNIKQ9UKE5 1360 aa17.13■□□□□ 0.33
HLA-DQB1-206ENST00000443574 ADCY10Q96PN6 1610 aa17.11■□□□□ 0.33
HLA-DQB1-206ENST00000443574 PTPRGP23470 1445 aa17.1■□□□□ 0.33
HLA-DQB1-206ENST00000443574 PPP6R1Q9UPN7 881 aa17.09■□□□□ 0.33
HLA-DQB1-206ENST00000443574 SAMD9Q5K651 1589 aa17.08■□□□□ 0.32
HLA-DQB1-206ENST00000443574 ADRA2BP18089 450 aa17.06■□□□□ 0.32
HLA-DQB1-206ENST00000443574 EFCAB5A4FU69 1503 aa17.04■□□□□ 0.32
HLA-DQB1-206ENST00000443574 ABCC2Q92887 1545 aa17.04■□□□□ 0.32
HLA-DQB1-206ENST00000443574 MAPKBP1O60336 1514 aa17.03■□□□□ 0.32
HLA-DQB1-206ENST00000443574 NPM1P06748 294 aaKnown RBP eCLIP17.03■□□□□ 0.32
HLA-DQB1-206ENST00000443574 UHRF1BP1LA0JNW5 1464 aa17.02■□□□□ 0.32
HLA-DQB1-206ENST00000443574 TTBK1Q5TCY1 1321 aaPredicted RBP17.01■□□□□ 0.31
HLA-DQB1-206ENST00000443574 TRHP20396 242 aaPredicted RBP17.01■□□□□ 0.31
HLA-DQB1-206ENST00000443574 UACAQ9BZF9 1416 aa17■□□□□ 0.31
HLA-DQB1-206ENST00000443574 KIF13AQ9H1H9 1805 aa17■□□□□ 0.31
HLA-DQB1-206ENST00000443574 ZCCHC11Q5TAX3 1644 aaKnown RBP16.97■□□□□ 0.31
HLA-DQB1-206ENST00000443574 UBTFP17480 764 aaKnown RBP16.96■□□□□ 0.31
HLA-DQB1-206ENST00000443574 ABCA8O94911 1581 aa16.96■□□□□ 0.31
HLA-DQB1-206ENST00000443574 DIP2BQ9P265 1576 aa16.94■□□□□ 0.3
HLA-DQB1-206ENST00000443574 RAPGEF6Q8TEU7 1601 aa16.93■□□□□ 0.3
HLA-DQB1-206ENST00000443574 KDM5BQ9UGL1 1544 aa16.93■□□□□ 0.3
HLA-DQB1-206ENST00000443574 PLB1Q6P1J6 1458 aa16.93■□□□□ 0.3
HLA-DQB1-206ENST00000443574 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
HLA-DQB1-206ENST00000443574 ABCC10Q5T3U5 1492 aa16.89■□□□□ 0.29
HLA-DQB1-206ENST00000443574 FHOD3Q2V2M9 1422 aa16.88■□□□□ 0.29
HLA-DQB1-206ENST00000443574 RANGAP1P46060 587 aaPredicted RBP16.88■□□□□ 0.29
HLA-DQB1-206ENST00000443574 P3H3Q8IVL6 736 aa16.87■□□□□ 0.29
HLA-DQB1-206ENST00000443574 ASXL2Q76L83 1435 aa16.86■□□□□ 0.29
HLA-DQB1-206ENST00000443574 TSPOAP1O95153 1857 aa16.83■□□□□ 0.28
HLA-DQB1-206ENST00000443574 FMN1Q68DA7 1419 aa16.83■□□□□ 0.28
HLA-DQB1-206ENST00000443574 HECW1Q76N89 1606 aa16.82■□□□□ 0.28
HLA-DQB1-206ENST00000443574 GLI2P10070 1586 aa16.82■□□□□ 0.28
HLA-DQB1-206ENST00000443574 ARHGAP35Q9NRY4 1499 aa16.82■□□□□ 0.28
HLA-DQB1-206ENST00000443574 WDR7Q9Y4E6 1490 aa16.82■□□□□ 0.28
HLA-DQB1-206ENST00000443574 PIAS4Q8N2W9 510 aaPredicted RBP16.82■□□□□ 0.28
HLA-DQB1-206ENST00000443574 CFAP43Q8NDM7 1665 aa16.79■□□□□ 0.28
HLA-DQB1-206ENST00000443574 FAM69CQ0P6D2 419 aa16.79■□□□□ 0.28
HLA-DQB1-206ENST00000443574 MAP3K4Q9Y6R4 1608 aa16.78■□□□□ 0.28
HLA-DQB1-206ENST00000443574 NUP153P49790 1475 aaKnown RBP16.78■□□□□ 0.28
HLA-DQB1-206ENST00000443574 EPRSP07814 1512 aaKnown RBP16.77■□□□□ 0.28
HLA-DQB1-206ENST00000443574 ATP10BO94823 1461 aa16.74■□□□□ 0.27
HLA-DQB1-206ENST00000443574 CLIP1P30622 1438 aa16.74■□□□□ 0.27
HLA-DQB1-206ENST00000443574 PCF11O94913 1555 aaKnown RBP16.72■□□□□ 0.27
HLA-DQB1-206ENST00000443574 PPRC1Q5VV67 1664 aaKnown RBP16.72■□□□□ 0.27
HLA-DQB1-206ENST00000443574 TEX14Q8IWB6 1497 aa16.71■□□□□ 0.27
HLA-DQB1-206ENST00000443574 KDM6BO15054 1643 aa16.7■□□□□ 0.26
HLA-DQB1-206ENST00000443574 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.7■□□□□ 0.26
HLA-DQB1-206ENST00000443574 HNRNPUL2Q1KMD3 747 aaKnown RBP16.7■□□□□ 0.26
HLA-DQB1-206ENST00000443574 ARID3CA6NKF2 412 aa16.69■□□□□ 0.26
HLA-DQB1-206ENST00000443574 ABCA9Q8IUA7 1624 aa16.69■□□□□ 0.26
HLA-DQB1-206ENST00000443574 LRRIQ1Q96JM4 1722 aa16.68■□□□□ 0.26
HLA-DQB1-206ENST00000443574 FYCO1Q9BQS8 1478 aa16.67■□□□□ 0.26
HLA-DQB1-206ENST00000443574 CDK13Q14004 1512 aaKnown RBP16.67■□□□□ 0.26
HLA-DQB1-206ENST00000443574 CEP162Q5TB80 1403 aa16.67■□□□□ 0.26
HLA-DQB1-206ENST00000443574 CCDC18Q5T9S5 1454 aa16.67■□□□□ 0.26
HLA-DQB1-206ENST00000443574 CASKIN1Q8WXD9 1431 aa16.65■□□□□ 0.26
HLA-DQB1-206ENST00000443574 ATP1B4Q9UN42 357 aaPredicted RBP16.63■□□□□ 0.25
HLA-DQB1-206ENST00000443574 MAGI3Q5TCQ9 1506 aa16.62■□□□□ 0.25
HLA-DQB1-206ENST00000443574 KCNH8Q96L42 1107 aa16.62■□□□□ 0.25
HLA-DQB1-206ENST00000443574 CFAP74Q9C0B2 1584 aa16.62■□□□□ 0.25
HLA-DQB1-206ENST00000443574 KIF14Q15058 1648 aa16.62■□□□□ 0.25
HLA-DQB1-206ENST00000443574 CD109Q6YHK3 1445 aa16.62■□□□□ 0.25
HLA-DQB1-206ENST00000443574 PLEKHD1A6NEE1 506 aa16.61■□□□□ 0.25
HLA-DQB1-206ENST00000443574 CDK11AQ9UQ88 783 aaPredicted RBP16.6■□□□□ 0.25
HLA-DQB1-206ENST00000443574 MYO5CQ9NQX4 1742 aa16.59■□□□□ 0.25
HLA-DQB1-206ENST00000443574 TTC37Q6PGP7 1564 aa16.58■□□□□ 0.24
HLA-DQB1-206ENST00000443574 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.56■□□□□ 0.24
HLA-DQB1-206ENST00000443574 MSH5O43196 834 aa16.54■□□□□ 0.24
HLA-DQB1-206ENST00000443574 TROQ12816 1431 aaPredicted RBP16.53■□□□□ 0.24
HLA-DQB1-206ENST00000443574 NEO1Q92859 1461 aa16.52■□□□□ 0.23
HLA-DQB1-206ENST00000443574 LOC105371045A0A1W2PR82 267 aa16.51■□□□□ 0.23
HLA-DQB1-206ENST00000443574 PHLDB1Q86UU1 1377 aa16.51■□□□□ 0.23
HLA-DQB1-206ENST00000443574 ARAP3Q8WWN8 1544 aa16.5■□□□□ 0.23
HLA-DQB1-206ENST00000443574 PREX2Q70Z35 1606 aa16.48■□□□□ 0.23
HLA-DQB1-206ENST00000443574 VPS8Q8N3P4 1428 aa16.48■□□□□ 0.23
HLA-DQB1-206ENST00000443574 EHBP1L1Q8N3D4 1523 aa16.48■□□□□ 0.23
HLA-DQB1-206ENST00000443574 FANCAO15360 1455 aa16.48■□□□□ 0.23
HLA-DQB1-206ENST00000443574 CDC42BPAQ5VT25 1732 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms