RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 KIAA0586Q9BVV6 1533 aa18.07■□□□□ 0.48
HDAC6-211ENST00000443563 CSRNP3Q8WYN3 585 aa18.05■□□□□ 0.48
HDAC6-211ENST00000443563 PRXQ9BXM0 1461 aa18.04■□□□□ 0.48
HDAC6-211ENST00000443563 JPH4Q96JJ6 628 aa18.01■□□□□ 0.47
HDAC6-211ENST00000443563 ARAP1Q96P48 1450 aa18■□□□□ 0.47
HDAC6-211ENST00000443563 IQGAP2Q13576 1575 aa18■□□□□ 0.47
HDAC6-211ENST00000443563 CTTNBP2Q8WZ74 1663 aa17.99■□□□□ 0.47
HDAC6-211ENST00000443563 PRG4Q92954 1404 aaPredicted RBP17.98■□□□□ 0.47
HDAC6-211ENST00000443563 CYB5RLQ6IPT4 315 aa17.96■□□□□ 0.47
HDAC6-211ENST00000443563 FAM9AQ8IZU1 332 aaPredicted RBP17.96■□□□□ 0.47
HDAC6-211ENST00000443563 ERCC6L2Q5T890 1561 aa17.95■□□□□ 0.46
HDAC6-211ENST00000443563 KIF21BO75037 1637 aa17.94■□□□□ 0.46
HDAC6-211ENST00000443563 CARMIL2Q6F5E8 1435 aa17.91■□□□□ 0.46
HDAC6-211ENST00000443563 UGGT2Q9NYU1 1516 aa17.88■□□□□ 0.45
HDAC6-211ENST00000443563 GOLGA3Q08378 1498 aa17.83■□□□□ 0.45
HDAC6-211ENST00000443563 DISP1Q96F81 1524 aa17.82■□□□□ 0.44
HDAC6-211ENST00000443563 KIAA0556O60303 1618 aa17.81■□□□□ 0.44
HDAC6-211ENST00000443563 TNIKQ9UKE5 1360 aa17.8■□□□□ 0.44
HDAC6-211ENST00000443563 PTPRGP23470 1445 aa17.78■□□□□ 0.44
HDAC6-211ENST00000443563 UBTFP17480 764 aaKnown RBP17.74■□□□□ 0.43
HDAC6-211ENST00000443563 SAMD9Q5K651 1589 aa17.72■□□□□ 0.43
HDAC6-211ENST00000443563 TTBK1Q5TCY1 1321 aaPredicted RBP17.71■□□□□ 0.42
HDAC6-211ENST00000443563 ADCY10Q96PN6 1610 aa17.7■□□□□ 0.42
HDAC6-211ENST00000443563 NPM1P06748 294 aaKnown RBP eCLIP17.69■□□□□ 0.42
HDAC6-211ENST00000443563 EHMT2Q96KQ7 1210 aa17.69■□□□□ 0.42
HDAC6-211ENST00000443563 EFCAB5A4FU69 1503 aa17.68■□□□□ 0.42
HDAC6-211ENST00000443563 UACAQ9BZF9 1416 aa17.67■□□□□ 0.42
HDAC6-211ENST00000443563 UHRF1BP1LA0JNW5 1464 aa17.67■□□□□ 0.42
HDAC6-211ENST00000443563 ABCC2Q92887 1545 aa17.65■□□□□ 0.42
HDAC6-211ENST00000443563 RANGAP1P46060 587 aaPredicted RBP17.63■□□□□ 0.41
HDAC6-211ENST00000443563 P3H3Q8IVL6 736 aa17.62■□□□□ 0.41
HDAC6-211ENST00000443563 TRHP20396 242 aaPredicted RBP17.6■□□□□ 0.41
HDAC6-211ENST00000443563 MAPKBP1O60336 1514 aa17.6■□□□□ 0.41
HDAC6-211ENST00000443563 ABCA8O94911 1581 aa17.6■□□□□ 0.41
HDAC6-211ENST00000443563 PLB1Q6P1J6 1458 aa17.58■□□□□ 0.41
HDAC6-211ENST00000443563 FHOD3Q2V2M9 1422 aa17.57■□□□□ 0.4
HDAC6-211ENST00000443563 KDM5BQ9UGL1 1544 aa17.57■□□□□ 0.4
HDAC6-211ENST00000443563 ZCCHC11Q5TAX3 1644 aaKnown RBP17.55■□□□□ 0.4
HDAC6-211ENST00000443563 RAPGEF6Q8TEU7 1601 aa17.55■□□□□ 0.4
HDAC6-211ENST00000443563 ARHGAP35Q9NRY4 1499 aa17.54■□□□□ 0.4
HDAC6-211ENST00000443563 FMN1Q68DA7 1419 aa17.51■□□□□ 0.39
HDAC6-211ENST00000443563 KIF13AQ9H1H9 1805 aa17.5■□□□□ 0.39
HDAC6-211ENST00000443563 ABCC10Q5T3U5 1492 aa17.49■□□□□ 0.39
HDAC6-211ENST00000443563 ASXL2Q76L83 1435 aa17.48■□□□□ 0.39
HDAC6-211ENST00000443563 DIP2BQ9P265 1576 aa17.48■□□□□ 0.39
HDAC6-211ENST00000443563 CLIP1P30622 1438 aa17.47■□□□□ 0.39
HDAC6-211ENST00000443563 ATP10BO94823 1461 aa17.44■□□□□ 0.38
HDAC6-211ENST00000443563 NUP153P49790 1475 aaKnown RBP17.44■□□□□ 0.38
HDAC6-211ENST00000443563 HECW1Q76N89 1606 aa17.43■□□□□ 0.38
HDAC6-211ENST00000443563 FAM69CQ0P6D2 419 aa17.43■□□□□ 0.38
HDAC6-211ENST00000443563 WDR7Q9Y4E6 1490 aa17.43■□□□□ 0.38
HDAC6-211ENST00000443563 GLI2P10070 1586 aa17.41■□□□□ 0.38
HDAC6-211ENST00000443563 CEP162Q5TB80 1403 aa17.41■□□□□ 0.38
HDAC6-211ENST00000443563 LOC105371045A0A1W2PR82 267 aa17.41■□□□□ 0.38
HDAC6-211ENST00000443563 EPRSP07814 1512 aaKnown RBP17.39■□□□□ 0.37
HDAC6-211ENST00000443563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.39■□□□□ 0.37
HDAC6-211ENST00000443563 HNRNPUL2Q1KMD3 747 aaKnown RBP17.39■□□□□ 0.37
HDAC6-211ENST00000443563 ARID3CA6NKF2 412 aa17.37■□□□□ 0.37
HDAC6-211ENST00000443563 ATP1B4Q9UN42 357 aaPredicted RBP17.37■□□□□ 0.37
HDAC6-211ENST00000443563 CASKIN1Q8WXD9 1431 aa17.36■□□□□ 0.37
HDAC6-211ENST00000443563 PCF11O94913 1555 aaKnown RBP17.35■□□□□ 0.37
HDAC6-211ENST00000443563 TSPOAP1O95153 1857 aa17.34■□□□□ 0.37
HDAC6-211ENST00000443563 FYCO1Q9BQS8 1478 aa17.34■□□□□ 0.37
HDAC6-211ENST00000443563 CFAP43Q8NDM7 1665 aa17.33■□□□□ 0.37
HDAC6-211ENST00000443563 MAP3K4Q9Y6R4 1608 aa17.33■□□□□ 0.37
HDAC6-211ENST00000443563 PLEKHD1A6NEE1 506 aa17.33■□□□□ 0.36
HDAC6-211ENST00000443563 CCDC18Q5T9S5 1454 aa17.32■□□□□ 0.36
HDAC6-211ENST00000443563 KCNH8Q96L42 1107 aa17.32■□□□□ 0.36
HDAC6-211ENST00000443563 CDK13Q14004 1512 aaKnown RBP17.31■□□□□ 0.36
HDAC6-211ENST00000443563 CDK11AQ9UQ88 783 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-211ENST00000443563 LRRIQ1Q96JM4 1722 aa17.3■□□□□ 0.36
HDAC6-211ENST00000443563 ABCA9Q8IUA7 1624 aa17.28■□□□□ 0.36
HDAC6-211ENST00000443563 TEX14Q8IWB6 1497 aa17.27■□□□□ 0.36
HDAC6-211ENST00000443563 PPRC1Q5VV67 1664 aaKnown RBP17.26■□□□□ 0.35
HDAC6-211ENST00000443563 CD109Q6YHK3 1445 aa17.26■□□□□ 0.35
HDAC6-211ENST00000443563 MAGI3Q5TCQ9 1506 aa17.23■□□□□ 0.35
HDAC6-211ENST00000443563 VPS8Q8N3P4 1428 aa17.21■□□□□ 0.35
HDAC6-211ENST00000443563 KIF14Q15058 1648 aa17.21■□□□□ 0.35
HDAC6-211ENST00000443563 TROQ12816 1431 aaPredicted RBP17.21■□□□□ 0.34
HDAC6-211ENST00000443563 KDM6BO15054 1643 aa17.2■□□□□ 0.34
HDAC6-211ENST00000443563 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.19■□□□□ 0.34
HDAC6-211ENST00000443563 TTC37Q6PGP7 1564 aa17.16■□□□□ 0.34
HDAC6-211ENST00000443563 PHLDB1Q86UU1 1377 aa17.15■□□□□ 0.34
HDAC6-211ENST00000443563 CFAP74Q9C0B2 1584 aa17.15■□□□□ 0.34
HDAC6-211ENST00000443563 MYO5CQ9NQX4 1742 aa17.15■□□□□ 0.34
HDAC6-211ENST00000443563 NEO1Q92859 1461 aa17.13■□□□□ 0.33
HDAC6-211ENST00000443563 MTUS2Q5JR59 1369 aa17.12■□□□□ 0.33
HDAC6-211ENST00000443563 EHBP1L1Q8N3D4 1523 aa17.11■□□□□ 0.33
HDAC6-211ENST00000443563 ARAP3Q8WWN8 1544 aa17.11■□□□□ 0.33
HDAC6-211ENST00000443563 TIAM1Q13009 1591 aa17.11■□□□□ 0.33
HDAC6-211ENST00000443563 PLCH2O75038 1416 aa17.1■□□□□ 0.33
HDAC6-211ENST00000443563 MAP3K1Q13233 1512 aa17.09■□□□□ 0.33
HDAC6-211ENST00000443563 FANCAO15360 1455 aa17.08■□□□□ 0.32
HDAC6-211ENST00000443563 APLP2Q06481 763 aa17.06■□□□□ 0.32
HDAC6-211ENST00000443563 PREX2Q70Z35 1606 aa17.06■□□□□ 0.32
HDAC6-211ENST00000443563 AKNAQ7Z591 1439 aa17.04■□□□□ 0.32
HDAC6-211ENST00000443563 CDC42BPAQ5VT25 1732 aa17.04■□□□□ 0.32
HDAC6-211ENST00000443563 SUPT6HQ7KZ85 1726 aaKnown RBP17.04■□□□□ 0.32
HDAC6-211ENST00000443563 CDC42BPBQ9Y5S2 1711 aa17.04■□□□□ 0.32
HDAC6-211ENST00000443563 EFCAB2Q5VUJ9 269 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms