RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 SHROOM2Q13796 1616 aa20.36■□□□□ 0.85
SLC48A1-202ENST00000442892 CYB5RLQ6IPT4 315 aa20.36■□□□□ 0.85
SLC48A1-202ENST00000442892 ERCC6L2Q5T890 1561 aa20.35■□□□□ 0.85
SLC48A1-202ENST00000442892 CSRNP3Q8WYN3 585 aa20.32■□□□□ 0.84
SLC48A1-202ENST00000442892 EEA1Q15075 1411 aa20.32■□□□□ 0.84
SLC48A1-202ENST00000442892 KIAA0586Q9BVV6 1533 aa20.32■□□□□ 0.84
SLC48A1-202ENST00000442892 PRG4Q92954 1404 aaPredicted RBP20.3■□□□□ 0.84
SLC48A1-202ENST00000442892 CTTNBP2Q8WZ74 1663 aa20.3■□□□□ 0.84
SLC48A1-202ENST00000442892 JPH4Q96JJ6 628 aa20.3■□□□□ 0.84
SLC48A1-202ENST00000442892 IQGAP2Q13576 1575 aa20.29■□□□□ 0.84
SLC48A1-202ENST00000442892 PRXQ9BXM0 1461 aa20.28■□□□□ 0.84
SLC48A1-202ENST00000442892 EHMT2Q96KQ7 1210 aa20.24■□□□□ 0.83
SLC48A1-202ENST00000442892 TTBK1Q5TCY1 1321 aaPredicted RBP20.22■□□□□ 0.83
SLC48A1-202ENST00000442892 KIF21BO75037 1637 aa20.16■□□□□ 0.82
SLC48A1-202ENST00000442892 CARMIL2Q6F5E8 1435 aa20.15■□□□□ 0.82
SLC48A1-202ENST00000442892 UGGT2Q9NYU1 1516 aa20.12■□□□□ 0.81
SLC48A1-202ENST00000442892 RANGAP1P46060 587 aaPredicted RBP20.11■□□□□ 0.81
SLC48A1-202ENST00000442892 KIAA0556O60303 1618 aa20.09■□□□□ 0.81
SLC48A1-202ENST00000442892 DISP1Q96F81 1524 aa20.08■□□□□ 0.81
SLC48A1-202ENST00000442892 TNIKQ9UKE5 1360 aa20.07■□□□□ 0.8
SLC48A1-202ENST00000442892 GOLGA3Q08378 1498 aa20.06■□□□□ 0.8
SLC48A1-202ENST00000442892 UBTFP17480 764 aaKnown RBP20.06■□□□□ 0.8
SLC48A1-202ENST00000442892 PTPRGP23470 1445 aa20.05■□□□□ 0.8
SLC48A1-202ENST00000442892 P3H3Q8IVL6 736 aa20.01■□□□□ 0.79
SLC48A1-202ENST00000442892 ADCY10Q96PN6 1610 aa20.01■□□□□ 0.79
SLC48A1-202ENST00000442892 TRHP20396 242 aaPredicted RBP20■□□□□ 0.79
SLC48A1-202ENST00000442892 NPM1P06748 294 aaKnown RBP eCLIP19.96■□□□□ 0.79
SLC48A1-202ENST00000442892 SAMD9Q5K651 1589 aa19.95■□□□□ 0.78
SLC48A1-202ENST00000442892 UACAQ9BZF9 1416 aa19.92■□□□□ 0.78
SLC48A1-202ENST00000442892 ABCC2Q92887 1545 aa19.89■□□□□ 0.77
SLC48A1-202ENST00000442892 FHOD3Q2V2M9 1422 aa19.88■□□□□ 0.77
SLC48A1-202ENST00000442892 EFCAB5A4FU69 1503 aa19.87■□□□□ 0.77
SLC48A1-202ENST00000442892 PLB1Q6P1J6 1458 aa19.87■□□□□ 0.77
SLC48A1-202ENST00000442892 UHRF1BP1LA0JNW5 1464 aa19.84■□□□□ 0.77
SLC48A1-202ENST00000442892 ZCCHC11Q5TAX3 1644 aaKnown RBP19.84■□□□□ 0.77
SLC48A1-202ENST00000442892 ABCA8O94911 1581 aa19.83■□□□□ 0.76
SLC48A1-202ENST00000442892 ARID3CA6NKF2 412 aa19.82■□□□□ 0.76
SLC48A1-202ENST00000442892 MAPKBP1O60336 1514 aa19.81■□□□□ 0.76
SLC48A1-202ENST00000442892 KIF13AQ9H1H9 1805 aa19.8■□□□□ 0.76
SLC48A1-202ENST00000442892 RAPGEF6Q8TEU7 1601 aa19.8■□□□□ 0.76
SLC48A1-202ENST00000442892 ARHGAP35Q9NRY4 1499 aa19.77■□□□□ 0.76
SLC48A1-202ENST00000442892 KDM5BQ9UGL1 1544 aa19.76■□□□□ 0.75
SLC48A1-202ENST00000442892 ASXL2Q76L83 1435 aa19.75■□□□□ 0.75
SLC48A1-202ENST00000442892 FAM69CQ0P6D2 419 aa19.74■□□□□ 0.75
SLC48A1-202ENST00000442892 DIP2BQ9P265 1576 aa19.74■□□□□ 0.75
SLC48A1-202ENST00000442892 TSPOAP1O95153 1857 aa19.73■□□□□ 0.75
SLC48A1-202ENST00000442892 LOC105371045A0A1W2PR82 267 aa19.72■□□□□ 0.75
SLC48A1-202ENST00000442892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.72■□□□□ 0.75
SLC48A1-202ENST00000442892 HNRNPUL2Q1KMD3 747 aaKnown RBP19.72■□□□□ 0.75
SLC48A1-202ENST00000442892 ATP1B4Q9UN42 357 aaPredicted RBP19.72■□□□□ 0.75
SLC48A1-202ENST00000442892 ABCC10Q5T3U5 1492 aa19.72■□□□□ 0.75
SLC48A1-202ENST00000442892 CLIP1P30622 1438 aa19.7■□□□□ 0.74
SLC48A1-202ENST00000442892 FMN1Q68DA7 1419 aa19.68■□□□□ 0.74
SLC48A1-202ENST00000442892 NUP153P49790 1475 aaKnown RBP19.67■□□□□ 0.74
SLC48A1-202ENST00000442892 WDR7Q9Y4E6 1490 aa19.66■□□□□ 0.74
SLC48A1-202ENST00000442892 ATP10BO94823 1461 aa19.65■□□□□ 0.74
SLC48A1-202ENST00000442892 HECW1Q76N89 1606 aa19.65■□□□□ 0.74
SLC48A1-202ENST00000442892 KCNH8Q96L42 1107 aa19.64■□□□□ 0.73
SLC48A1-202ENST00000442892 CEP162Q5TB80 1403 aa19.63■□□□□ 0.73
SLC48A1-202ENST00000442892 EPRSP07814 1512 aaKnown RBP19.61■□□□□ 0.73
SLC48A1-202ENST00000442892 PCF11O94913 1555 aaKnown RBP19.61■□□□□ 0.73
SLC48A1-202ENST00000442892 CDK13Q14004 1512 aaKnown RBP19.61■□□□□ 0.73
SLC48A1-202ENST00000442892 GLI2P10070 1586 aa19.57■□□□□ 0.72
SLC48A1-202ENST00000442892 LRRIQ1Q96JM4 1722 aa19.56■□□□□ 0.72
SLC48A1-202ENST00000442892 MAP3K4Q9Y6R4 1608 aa19.54■□□□□ 0.72
SLC48A1-202ENST00000442892 CFAP43Q8NDM7 1665 aa19.52■□□□□ 0.72
SLC48A1-202ENST00000442892 PLEKHD1A6NEE1 506 aa19.52■□□□□ 0.72
SLC48A1-202ENST00000442892 PPRC1Q5VV67 1664 aaKnown RBP19.52■□□□□ 0.71
SLC48A1-202ENST00000442892 CASKIN1Q8WXD9 1431 aa19.51■□□□□ 0.71
SLC48A1-202ENST00000442892 FYCO1Q9BQS8 1478 aa19.5■□□□□ 0.71
SLC48A1-202ENST00000442892 CD109Q6YHK3 1445 aa19.47■□□□□ 0.71
SLC48A1-202ENST00000442892 KDM6BO15054 1643 aa19.46■□□□□ 0.71
SLC48A1-202ENST00000442892 CCDC18Q5T9S5 1454 aa19.46■□□□□ 0.71
SLC48A1-202ENST00000442892 ABCA9Q8IUA7 1624 aa19.45■□□□□ 0.7
SLC48A1-202ENST00000442892 CDK11AQ9UQ88 783 aaPredicted RBP19.45■□□□□ 0.7
SLC48A1-202ENST00000442892 TEX14Q8IWB6 1497 aa19.45■□□□□ 0.7
SLC48A1-202ENST00000442892 TTC37Q6PGP7 1564 aa19.41■□□□□ 0.7
SLC48A1-202ENST00000442892 KIF14Q15058 1648 aa19.4■□□□□ 0.7
SLC48A1-202ENST00000442892 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.39■□□□□ 0.696e-9■■■□□ 15.3
SLC48A1-202ENST00000442892 TROQ12816 1431 aaPredicted RBP19.38■□□□□ 0.69
SLC48A1-202ENST00000442892 MAGI3Q5TCQ9 1506 aa19.38■□□□□ 0.69
SLC48A1-202ENST00000442892 VPS8Q8N3P4 1428 aa19.36■□□□□ 0.69
SLC48A1-202ENST00000442892 MYO5CQ9NQX4 1742 aa19.36■□□□□ 0.69
SLC48A1-202ENST00000442892 MTUS2Q5JR59 1369 aa19.32■□□□□ 0.68
SLC48A1-202ENST00000442892 CFAP74Q9C0B2 1584 aa19.3■□□□□ 0.68
SLC48A1-202ENST00000442892 FANCAO15360 1455 aa19.28■□□□□ 0.68
SLC48A1-202ENST00000442892 COL17A1Q9UMD9 1497 aaPredicted RBP19.27■□□□□ 0.67
SLC48A1-202ENST00000442892 TIAM1Q13009 1591 aa19.27■□□□□ 0.67
SLC48A1-202ENST00000442892 ARHGAP5Q13017 1502 aa19.26■□□□□ 0.67
SLC48A1-202ENST00000442892 EHBP1L1Q8N3D4 1523 aa19.25■□□□□ 0.67
SLC48A1-202ENST00000442892 NEO1Q92859 1461 aa19.25■□□□□ 0.67
SLC48A1-202ENST00000442892 CDC42BPAQ5VT25 1732 aa19.24■□□□□ 0.67
SLC48A1-202ENST00000442892 CDC42BPBQ9Y5S2 1711 aa19.23■□□□□ 0.67
SLC48A1-202ENST00000442892 PREX2Q70Z35 1606 aa19.23■□□□□ 0.67
SLC48A1-202ENST00000442892 APLP2Q06481 763 aa19.23■□□□□ 0.67
SLC48A1-202ENST00000442892 PLCH2O75038 1416 aa19.23■□□□□ 0.67
SLC48A1-202ENST00000442892 AKNAQ7Z591 1439 aa19.22■□□□□ 0.67
SLC48A1-202ENST00000442892 SUPT6HQ7KZ85 1726 aaKnown RBP19.21■□□□□ 0.67
SLC48A1-202ENST00000442892 ARAP3Q8WWN8 1544 aa19.2■□□□□ 0.66
SLC48A1-202ENST00000442892 PHLDB1Q86UU1 1377 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms