RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 CTTNBP2Q8WZ74 1663 aa22.16■■□□□ 1.14
TM9SF4-204ENST00000442842 UBTFP17480 764 aaKnown RBP22.14■■□□□ 1.13
TM9SF4-204ENST00000442842 KIAA0586Q9BVV6 1533 aa22.14■■□□□ 1.13
TM9SF4-204ENST00000442842 IQGAP2Q13576 1575 aa22.12■■□□□ 1.13
TM9SF4-204ENST00000442842 LOC105371045A0A1W2PR82 267 aa22.04■■□□□ 1.12
TM9SF4-204ENST00000442842 RANGAP1P46060 587 aaPredicted RBP22.04■■□□□ 1.12
TM9SF4-204ENST00000442842 SHROOM2Q13796 1616 aa22.03■■□□□ 1.12
TM9SF4-204ENST00000442842 JPH4Q96JJ6 628 aa22.01■■□□□ 1.11
TM9SF4-204ENST00000442842 PRG4Q92954 1404 aaPredicted RBP21.99■■□□□ 1.11
TM9SF4-204ENST00000442842 UGGT2Q9NYU1 1516 aa21.98■■□□□ 1.11
TM9SF4-204ENST00000442842 TNIKQ9UKE5 1360 aa21.98■■□□□ 1.11
TM9SF4-204ENST00000442842 ERCC6L2Q5T890 1561 aa21.97■■□□□ 1.11
TM9SF4-204ENST00000442842 ARHGEF11O15085 1522 aa21.96■■□□□ 1.11
TM9SF4-204ENST00000442842 KIAA0556O60303 1618 aa21.92■■□□□ 1.1
TM9SF4-204ENST00000442842 DISP1Q96F81 1524 aa21.92■■□□□ 1.1
TM9SF4-204ENST00000442842 CARMIL2Q6F5E8 1435 aa21.92■■□□□ 1.1
TM9SF4-204ENST00000442842 RIMBP3CA6NJZ7 1639 aa21.91■■□□□ 1.1
TM9SF4-204ENST00000442842 RIMBP3BA6NNM3 1639 aa21.91■■□□□ 1.1
TM9SF4-204ENST00000442842 RIMBP3Q9UFD9 1639 aa21.91■■□□□ 1.1
TM9SF4-204ENST00000442842 DNAJC5Q9H3Z4 198 aa21.9■■□□□ 1.1
TM9SF4-204ENST00000442842 SAMD9Q5K651 1589 aa21.9■■□□□ 1.1
TM9SF4-204ENST00000442842 EFCAB5A4FU69 1503 aa21.88■■□□□ 1.09
TM9SF4-204ENST00000442842 TTBK1Q5TCY1 1321 aaPredicted RBP21.87■■□□□ 1.09
TM9SF4-204ENST00000442842 P3H3Q8IVL6 736 aa21.87■■□□□ 1.09
TM9SF4-204ENST00000442842 CEP162Q5TB80 1403 aa21.87■■□□□ 1.09
TM9SF4-204ENST00000442842 CLIP1P30622 1438 aa21.85■■□□□ 1.09
TM9SF4-204ENST00000442842 FHOD3Q2V2M9 1422 aa21.84■■□□□ 1.09
TM9SF4-204ENST00000442842 ARHGAP35Q9NRY4 1499 aa21.83■■□□□ 1.09
TM9SF4-204ENST00000442842 ARAP1Q96P48 1450 aa21.82■■□□□ 1.08
TM9SF4-204ENST00000442842 PTPRGP23470 1445 aa21.76■■□□□ 1.07
TM9SF4-204ENST00000442842 CYB5RLQ6IPT4 315 aa21.72■■□□□ 1.07
TM9SF4-204ENST00000442842 PLB1Q6P1J6 1458 aa21.66■■□□□ 1.06
TM9SF4-204ENST00000442842 FMN1Q68DA7 1419 aa21.65■■□□□ 1.06
TM9SF4-204ENST00000442842 UACAQ9BZF9 1416 aa21.63■■□□□ 1.05
TM9SF4-204ENST00000442842 ABCA8O94911 1581 aa21.62■■□□□ 1.05
TM9SF4-204ENST00000442842 RAPGEF6Q8TEU7 1601 aa21.62■■□□□ 1.05
TM9SF4-204ENST00000442842 ADCY10Q96PN6 1610 aa21.61■■□□□ 1.05
TM9SF4-204ENST00000442842 PCF11O94913 1555 aaKnown RBP21.61■■□□□ 1.05
TM9SF4-204ENST00000442842 ABCC2Q92887 1545 aa21.6■■□□□ 1.05
TM9SF4-204ENST00000442842 ATP1B4Q9UN42 357 aaPredicted RBP21.58■■□□□ 1.05
TM9SF4-204ENST00000442842 ARID3CA6NKF2 412 aa21.56■■□□□ 1.04
TM9SF4-204ENST00000442842 UHRF1BP1LA0JNW5 1464 aa21.56■■□□□ 1.04
TM9SF4-204ENST00000442842 VPS8Q8N3P4 1428 aa21.55■■□□□ 1.04
TM9SF4-204ENST00000442842 HECW1Q76N89 1606 aa21.55■■□□□ 1.04
TM9SF4-204ENST00000442842 NUP153P49790 1475 aaKnown RBP21.53■■□□□ 1.04
TM9SF4-204ENST00000442842 CASKIN1Q8WXD9 1431 aa21.53■■□□□ 1.04
TM9SF4-204ENST00000442842 FYCO1Q9BQS8 1478 aa21.52■■□□□ 1.04
TM9SF4-204ENST00000442842 ZCCHC11Q5TAX3 1644 aaKnown RBP21.47■■□□□ 1.03
TM9SF4-204ENST00000442842 CDK13Q14004 1512 aaKnown RBP21.47■■□□□ 1.03
TM9SF4-204ENST00000442842 NPM1P06748 294 aaKnown RBP eCLIP21.47■■□□□ 1.03
TM9SF4-204ENST00000442842 KDM5BQ9UGL1 1544 aa21.46■■□□□ 1.03
TM9SF4-204ENST00000442842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.46■■□□□ 1.03
TM9SF4-204ENST00000442842 HNRNPUL2Q1KMD3 747 aaKnown RBP21.46■■□□□ 1.03
TM9SF4-204ENST00000442842 EPRSP07814 1512 aaKnown RBP21.45■■□□□ 1.02
TM9SF4-204ENST00000442842 ATP10BO94823 1461 aa21.43■■□□□ 1.02
TM9SF4-204ENST00000442842 CCDC18Q5T9S5 1454 aa21.43■■□□□ 1.02
TM9SF4-204ENST00000442842 LRRIQ1Q96JM4 1722 aa21.41■■□□□ 1.02
TM9SF4-204ENST00000442842 MAPKBP1O60336 1514 aa21.36■■□□□ 1.01
TM9SF4-204ENST00000442842 ASXL2Q76L83 1435 aa21.36■■□□□ 1.01
TM9SF4-204ENST00000442842 CFAP43Q8NDM7 1665 aa21.35■■□□□ 1.01
TM9SF4-204ENST00000442842 TIAM1Q13009 1591 aa21.33■■□□□ 1.01
TM9SF4-204ENST00000442842 WDR7Q9Y4E6 1490 aa21.32■■□□□ 1
TM9SF4-204ENST00000442842 APLP2Q06481 763 aa21.31■■□□□ 1
TM9SF4-204ENST00000442842 CDK11AQ9UQ88 783 aaPredicted RBP21.28■■□□□ 1
TM9SF4-204ENST00000442842 MAGI3Q5TCQ9 1506 aa21.28■■□□□ 1
TM9SF4-204ENST00000442842 PLEKHD1A6NEE1 506 aa21.27■■□□□ 1
TM9SF4-204ENST00000442842 MTUS2Q5JR59 1369 aa21.25■□□□□ 0.99
TM9SF4-204ENST00000442842 TROQ12816 1431 aaPredicted RBP21.25■□□□□ 0.99
TM9SF4-204ENST00000442842 MAP3K1Q13233 1512 aa21.24■□□□□ 0.99
TM9SF4-204ENST00000442842 EHBP1L1Q8N3D4 1523 aa21.24■□□□□ 0.99
TM9SF4-204ENST00000442842 KCNH8Q96L42 1107 aa21.24■□□□□ 0.99
TM9SF4-204ENST00000442842 DIP2BQ9P265 1576 aa21.23■□□□□ 0.99
TM9SF4-204ENST00000442842 KIF14Q15058 1648 aa21.22■□□□□ 0.99
TM9SF4-204ENST00000442842 ABCC10Q5T3U5 1492 aa21.21■□□□□ 0.99
TM9SF4-204ENST00000442842 LRRC9Q6ZRR7 1453 aa21.21■□□□□ 0.99
TM9SF4-204ENST00000442842 KANK4Q5T7N3 995 aaPredicted RBP21.19■□□□□ 0.98
TM9SF4-204ENST00000442842 TRHP20396 242 aaPredicted RBP21.18■□□□□ 0.98
TM9SF4-204ENST00000442842 FAM69CQ0P6D2 419 aa21.17■□□□□ 0.98
TM9SF4-204ENST00000442842 PPARGC1BQ86YN6 1023 aaKnown RBP21.15■□□□□ 0.98
TM9SF4-204ENST00000442842 TTC37Q6PGP7 1564 aa21.14■□□□□ 0.98
TM9SF4-204ENST00000442842 GLI2P10070 1586 aa21.14■□□□□ 0.97
TM9SF4-204ENST00000442842 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.14■□□□□ 0.97
TM9SF4-204ENST00000442842 SUPT6HQ7KZ85 1726 aaKnown RBP21.12■□□□□ 0.97
TM9SF4-204ENST00000442842 KIF13AQ9H1H9 1805 aa21.12■□□□□ 0.97
TM9SF4-204ENST00000442842 ABCA9Q8IUA7 1624 aa21.11■□□□□ 0.97
TM9SF4-204ENST00000442842 NCOA2Q15596 1464 aa21.1■□□□□ 0.97
TM9SF4-204ENST00000442842 MAP3K4Q9Y6R4 1608 aa21.08■□□□□ 0.97
TM9SF4-204ENST00000442842 CD109Q6YHK3 1445 aa21.07■□□□□ 0.96
TM9SF4-204ENST00000442842 CCNB3Q8WWL7 1395 aa21.05■□□□□ 0.96
TM9SF4-204ENST00000442842 MYO5CQ9NQX4 1742 aa21.03■□□□□ 0.96
TM9SF4-204ENST00000442842 PREX2Q70Z35 1606 aa21.01■□□□□ 0.95
TM9SF4-204ENST00000442842 ARHGAP5Q13017 1502 aa21.01■□□□□ 0.95
TM9SF4-204ENST00000442842 TSPOAP1O95153 1857 aa21.01■□□□□ 0.95
TM9SF4-204ENST00000442842 ITSN2Q9NZM3 1697 aa20.99■□□□□ 0.95
TM9SF4-204ENST00000442842 GPATCH8Q9UKJ3 1502 aaKnown RBP20.99■□□□□ 0.95
TM9SF4-204ENST00000442842 PHLDB1Q86UU1 1377 aa20.98■□□□□ 0.95
TM9SF4-204ENST00000442842 CDC42BPAQ5VT25 1732 aa20.98■□□□□ 0.95
TM9SF4-204ENST00000442842 PLCH2O75038 1416 aa20.98■□□□□ 0.95
TM9SF4-204ENST00000442842 PPRC1Q5VV67 1664 aaKnown RBP20.98■□□□□ 0.95
TM9SF4-204ENST00000442842 TEX14Q8IWB6 1497 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms