RNA–Protein interactions for RNA: ENST00000441946.6

PSME3-202, Transcript of proteasome activator subunit 3, humanhuman

TSL 2 BASIC

Gene PSME3, Length 2,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-202ENST00000441946 FHOD3Q2V2M9 1422 aa24.1■■□□□ 1.45
PSME3-202ENST00000441946 CENPBP07199 599 aaPredicted RBP24.07■■□□□ 1.44
PSME3-202ENST00000441946 GTF3C3Q9Y5Q9 886 aa24.07■■□□□ 1.44
PSME3-202ENST00000441946 PHLDB1Q86UU1 1377 aa24.04■■□□□ 1.44
PSME3-202ENST00000441946 DNMBPQ6XZF7 1577 aa24.04■■□□□ 1.44
PSME3-202ENST00000441946 ABCA10Q8WWZ4 1543 aa23.99■■□□□ 1.43
PSME3-202ENST00000441946 TIAM1Q13009 1591 aa23.99■■□□□ 1.43
PSME3-202ENST00000441946 URB2Q14146 1524 aaKnown RBP23.99■■□□□ 1.43
PSME3-202ENST00000441946 RAB3GAP2Q9H2M9 1393 aa23.98■■□□□ 1.43
PSME3-202ENST00000441946 LRRC9Q6ZRR7 1453 aa23.97■■□□□ 1.43
PSME3-202ENST00000441946 FHAD1B1AJZ9 1412 aa23.93■■□□□ 1.42
PSME3-202ENST00000441946 PCF11O94913 1555 aaKnown RBP23.92■■□□□ 1.42
PSME3-202ENST00000441946 CLSPNQ9HAW4 1339 aa23.91■■□□□ 1.42
PSME3-202ENST00000441946 SIN3AQ96ST3 1273 aa23.89■■□□□ 1.41
PSME3-202ENST00000441946 ARID3CA6NKF2 412 aa23.86■■□□□ 1.41
PSME3-202ENST00000441946 PDS5BQ9NTI5 1447 aa23.82■■□□□ 1.4
PSME3-202ENST00000441946 GAPVD1Q14C86 1478 aa23.82■■□□□ 1.4
PSME3-202ENST00000441946 SETD5Q9C0A6 1442 aa23.81■■□□□ 1.4
PSME3-202ENST00000441946 LAMC3Q9Y6N6 1575 aa23.8■■□□□ 1.4
PSME3-202ENST00000441946 MAP3K1Q13233 1512 aa23.78■■□□□ 1.4
PSME3-202ENST00000441946 MTUS2Q5JR59 1369 aa23.76■■□□□ 1.39
PSME3-202ENST00000441946 CASKIN1Q8WXD9 1431 aa23.76■■□□□ 1.39
PSME3-202ENST00000441946 MAPKBP1O60336 1514 aa23.73■■□□□ 1.39
PSME3-202ENST00000441946 HIRIP3Q9BW71 556 aaPredicted RBP23.73■■□□□ 1.39
PSME3-202ENST00000441946 FYCO1Q9BQS8 1478 aa23.72■■□□□ 1.39
PSME3-202ENST00000441946 CUL7Q14999 1698 aa23.72■■□□□ 1.39
PSME3-202ENST00000441946 AQRO60306 1485 aaKnown RBP eCLIP23.72■■□□□ 1.394e-7■■■■□ 21.8
PSME3-202ENST00000441946 KIF21AQ7Z4S6 1674 aa23.69■■□□□ 1.38
PSME3-202ENST00000441946 FMN1Q68DA7 1419 aa23.69■■□□□ 1.38
PSME3-202ENST00000441946 EFCAB5A4FU69 1503 aa23.68■■□□□ 1.38
PSME3-202ENST00000441946 CFAP43Q8NDM7 1665 aa23.67■■□□□ 1.38
PSME3-202ENST00000441946 CTTNBP2Q8WZ74 1663 aa23.65■■□□□ 1.38
PSME3-202ENST00000441946 ABCA5Q8WWZ7 1642 aa23.64■■□□□ 1.38
PSME3-202ENST00000441946 SNAPC4Q5SXM2 1469 aa23.64■■□□□ 1.37
PSME3-202ENST00000441946 CHIC2Q9UKJ5 165 aa23.63■■□□□ 1.37
PSME3-202ENST00000441946 WDR97A6NE52 1622 aa23.63■■□□□ 1.37
PSME3-202ENST00000441946 FGD6Q6ZV73 1430 aa23.62■■□□□ 1.37
PSME3-202ENST00000441946 KCNH8Q96L42 1107 aa23.6■■□□□ 1.37
PSME3-202ENST00000441946 PTPRKQ15262 1439 aa23.59■■□□□ 1.37
PSME3-202ENST00000441946 DDX10Q13206 875 aaKnown RBP23.56■■□□□ 1.36
PSME3-202ENST00000441946 RRP7BPQ9NSQ0 103 aa23.56■■□□□ 1.36
PSME3-202ENST00000441946 NCOA2Q15596 1464 aa23.53■■□□□ 1.36
PSME3-202ENST00000441946 TARBP1Q13395 1621 aaKnown RBP23.53■■□□□ 1.36
PSME3-202ENST00000441946 ZNF608Q9ULD9 1512 aaPredicted RBP23.51■■□□□ 1.35
PSME3-202ENST00000441946 GRIN2BQ13224 1484 aa23.5■■□□□ 1.35
PSME3-202ENST00000441946 SAMD9Q5K651 1589 aa23.49■■□□□ 1.35
PSME3-202ENST00000441946 LRRIQ1Q96JM4 1722 aa23.47■■□□□ 1.35
PSME3-202ENST00000441946 MYOM3Q5VTT5 1437 aa23.46■■□□□ 1.35
PSME3-202ENST00000441946 MAGI3Q5TCQ9 1506 aa23.45■■□□□ 1.34
PSME3-202ENST00000441946 FBLN2P98095 1184 aa23.45■■□□□ 1.34
PSME3-202ENST00000441946 CCDC18Q5T9S5 1454 aa23.45■■□□□ 1.34
PSME3-202ENST00000441946 PPP1R15AO75807 674 aaPredicted RBP23.45■■□□□ 1.34
PSME3-202ENST00000441946 TRIM52Q96A61 297 aa23.43■■□□□ 1.34
PSME3-202ENST00000441946 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
PSME3-202ENST00000441946 CDK13Q14004 1512 aaKnown RBP23.42■■□□□ 1.34
PSME3-202ENST00000441946 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.42■■□□□ 1.34
PSME3-202ENST00000441946 TONSLQ96HA7 1378 aa23.4■■□□□ 1.34
PSME3-202ENST00000441946 NAIPQ13075 1403 aa23.39■■□□□ 1.33
PSME3-202ENST00000441946 HFM1A2PYH4 1435 aa23.37■■□□□ 1.33
PSME3-202ENST00000441946 FOXD1Q16676 465 aa23.36■■□□□ 1.33
PSME3-202ENST00000441946 IQGAP2Q13576 1575 aa23.36■■□□□ 1.33
PSME3-202ENST00000441946 PBRM1Q86U86 1689 aa23.35■■□□□ 1.33
PSME3-202ENST00000441946 ZNF644Q9H582 1327 aaPredicted RBP23.33■■□□□ 1.33
PSME3-202ENST00000441946 EPRSP07814 1512 aaKnown RBP23.33■■□□□ 1.32
PSME3-202ENST00000441946 ADAMTS12P58397 1594 aa23.32■■□□□ 1.32
PSME3-202ENST00000441946 EHBP1L1Q8N3D4 1523 aa23.32■■□□□ 1.32
PSME3-202ENST00000441946 SUPT6HQ7KZ85 1726 aaKnown RBP23.32■■□□□ 1.32
PSME3-202ENST00000441946 PELP1Q8IZL8 1130 aaKnown RBP23.32■■□□□ 1.32
PSME3-202ENST00000441946 UACAQ9BZF9 1416 aa23.31■■□□□ 1.32
PSME3-202ENST00000441946 PTPN23Q9H3S7 1636 aa23.31■■□□□ 1.32
PSME3-202ENST00000441946 UGGT2Q9NYU1 1516 aa23.3■■□□□ 1.32
PSME3-202ENST00000441946 CHMP7Q8WUX9 453 aaPredicted RBP23.29■■□□□ 1.32
PSME3-202ENST00000441946 TIMELESSQ9UNS1 1208 aa23.27■■□□□ 1.32
PSME3-202ENST00000441946 ERCC6Q03468 1493 aa23.27■■□□□ 1.32
PSME3-202ENST00000441946 THOC2Q8NI27 1593 aaKnown RBP23.26■■□□□ 1.31
PSME3-202ENST00000441946 IFT140Q96RY7 1462 aa23.24■■□□□ 1.31
PSME3-202ENST00000441946 HECW1Q76N89 1606 aa23.22■■□□□ 1.31
PSME3-202ENST00000441946 ZNF777Q9ULD5 760 aaPredicted RBP23.22■■□□□ 1.31
PSME3-202ENST00000441946 ARHGEF11O15085 1522 aa23.2■■□□□ 1.3
PSME3-202ENST00000441946 WDR62O43379 1518 aa23.19■■□□□ 1.3
PSME3-202ENST00000441946 MPHOSPH9Q99550 1183 aa23.19■■□□□ 1.3
PSME3-202ENST00000441946 KDM6BO15054 1643 aa23.19■■□□□ 1.3
PSME3-202ENST00000441946 DISP1Q96F81 1524 aa23.18■■□□□ 1.3
PSME3-202ENST00000441946 SUPT16HQ9Y5B9 1047 aaKnown RBP23.17■■□□□ 1.3
PSME3-202ENST00000441946 KIAA0586Q9BVV6 1533 aa23.16■■□□□ 1.3
PSME3-202ENST00000441946 GRIN2AQ12879 1464 aa23.15■■□□□ 1.3
PSME3-202ENST00000441946 ANP32CO43423 234 aa23.14■■□□□ 1.3
PSME3-202ENST00000441946 PRG4Q92954 1404 aaPredicted RBP23.13■■□□□ 1.29
PSME3-202ENST00000441946 NUP153P49790 1475 aaKnown RBP23.13■■□□□ 1.29
PSME3-202ENST00000441946 DENND4BO75064 1496 aaPredicted RBP23.12■■□□□ 1.29
PSME3-202ENST00000441946 EIF4G3O43432 1585 aaKnown RBP23.12■■□□□ 1.29
PSME3-202ENST00000441946 TCOF1Q13428 1488 aaKnown RBP23.11■■□□□ 1.29
PSME3-202ENST00000441946 PLB1Q6P1J6 1458 aa23.11■■□□□ 1.29
PSME3-202ENST00000441946 L3MBTL2Q969R5 705 aa23.11■■□□□ 1.29
PSME3-202ENST00000441946 BCANQ96GW7 911 aa23.1■■□□□ 1.29
PSME3-202ENST00000441946 CDK11AQ9UQ88 783 aaPredicted RBP23.1■■□□□ 1.29
PSME3-202ENST00000441946 JPH4Q96JJ6 628 aa23.09■■□□□ 1.29
PSME3-202ENST00000441946 CFDP1Q9UEE9 299 aaPredicted RBP23.09■■□□□ 1.29
PSME3-202ENST00000441946 KIAA0556O60303 1618 aa23.09■■□□□ 1.29
PSME3-202ENST00000441946 HSPA5P11021 654 aaKnown RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms