RNA–Protein interactions for RNA: ENST00000441879.5

PCYT1A-209, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 724 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-209ENST00000441879 SHROOM2Q13796 1616 aa26.83■■□□□ 1.89
PCYT1A-209ENST00000441879 JPH4Q96JJ6 628 aa26.8■■□□□ 1.88
PCYT1A-209ENST00000441879 ARAP1Q96P48 1450 aa26.78■■□□□ 1.88
PCYT1A-209ENST00000441879 CYB5RLQ6IPT4 315 aa26.76■■□□□ 1.87
PCYT1A-209ENST00000441879 CSRNP3Q8WYN3 585 aa26.76■■□□□ 1.87
PCYT1A-209ENST00000441879 PRXQ9BXM0 1461 aa26.74■■□□□ 1.87
PCYT1A-209ENST00000441879 PRG4Q92954 1404 aaPredicted RBP26.71■■□□□ 1.87
PCYT1A-209ENST00000441879 IQGAP2Q13576 1575 aa26.66■■□□□ 1.86
PCYT1A-209ENST00000441879 CARMIL2Q6F5E8 1435 aa26.61■■□□□ 1.85
PCYT1A-209ENST00000441879 ERCC6L2Q5T890 1561 aa26.61■■□□□ 1.85
PCYT1A-209ENST00000441879 CTTNBP2Q8WZ74 1663 aa26.56■■□□□ 1.84
PCYT1A-209ENST00000441879 UGGT2Q9NYU1 1516 aa26.54■■□□□ 1.84
PCYT1A-209ENST00000441879 FAM9AQ8IZU1 332 aaPredicted RBP26.5■■□□□ 1.83
PCYT1A-209ENST00000441879 KIF21BO75037 1637 aa26.5■■□□□ 1.83
PCYT1A-209ENST00000441879 TNIKQ9UKE5 1360 aa26.47■■□□□ 1.83
PCYT1A-209ENST00000441879 GOLGA3Q08378 1498 aa26.47■■□□□ 1.83
PCYT1A-209ENST00000441879 PTPRGP23470 1445 aa26.43■■□□□ 1.82
PCYT1A-209ENST00000441879 DISP1Q96F81 1524 aa26.43■■□□□ 1.82
PCYT1A-209ENST00000441879 KIAA0556O60303 1618 aa26.38■■□□□ 1.81
PCYT1A-209ENST00000441879 NPM1P06748 294 aaKnown RBP eCLIP26.34■■□□□ 1.81
PCYT1A-209ENST00000441879 UHRF1BP1LA0JNW5 1464 aa26.27■■□□□ 1.8
PCYT1A-209ENST00000441879 ADCY10Q96PN6 1610 aa26.26■■□□□ 1.79
PCYT1A-209ENST00000441879 UBTFP17480 764 aaKnown RBP26.26■■□□□ 1.79
PCYT1A-209ENST00000441879 UACAQ9BZF9 1416 aa26.25■■□□□ 1.79
PCYT1A-209ENST00000441879 SAMD9Q5K651 1589 aa26.23■■□□□ 1.79
PCYT1A-209ENST00000441879 TRHP20396 242 aaPredicted RBP26.22■■□□□ 1.79
PCYT1A-209ENST00000441879 TTBK1Q5TCY1 1321 aaPredicted RBP26.2■■□□□ 1.79
PCYT1A-209ENST00000441879 EFCAB5A4FU69 1503 aa26.19■■□□□ 1.78
PCYT1A-209ENST00000441879 ABCC2Q92887 1545 aa26.19■■□□□ 1.78
PCYT1A-209ENST00000441879 MAPKBP1O60336 1514 aa26.19■■□□□ 1.78
PCYT1A-209ENST00000441879 KDM5BQ9UGL1 1544 aa26.1■■□□□ 1.77
PCYT1A-209ENST00000441879 ABCA8O94911 1581 aa26.09■■□□□ 1.77
PCYT1A-209ENST00000441879 P3H3Q8IVL6 736 aa26.08■■□□□ 1.77
PCYT1A-209ENST00000441879 PLB1Q6P1J6 1458 aa26.07■■□□□ 1.76
PCYT1A-209ENST00000441879 EHMT2Q96KQ7 1210 aa26.05■■□□□ 1.76
PCYT1A-209ENST00000441879 RANGAP1P46060 587 aaPredicted RBP26.04■■□□□ 1.76
PCYT1A-209ENST00000441879 ABCC10Q5T3U5 1492 aa26.04■■□□□ 1.76
PCYT1A-209ENST00000441879 FHOD3Q2V2M9 1422 aa26■■□□□ 1.75
PCYT1A-209ENST00000441879 ASXL2Q76L83 1435 aa25.99■■□□□ 1.75
PCYT1A-209ENST00000441879 ZCCHC11Q5TAX3 1644 aaKnown RBP25.99■■□□□ 1.75
PCYT1A-209ENST00000441879 RAPGEF6Q8TEU7 1601 aa25.97■■□□□ 1.75
PCYT1A-209ENST00000441879 FMN1Q68DA7 1419 aa25.97■■□□□ 1.75
PCYT1A-209ENST00000441879 FAM69CQ0P6D2 419 aa25.95■■□□□ 1.74
PCYT1A-209ENST00000441879 ARHGAP35Q9NRY4 1499 aa25.95■■□□□ 1.74
PCYT1A-209ENST00000441879 DIP2BQ9P265 1576 aa25.95■■□□□ 1.74
PCYT1A-209ENST00000441879 KIF13AQ9H1H9 1805 aa25.94■■□□□ 1.74
PCYT1A-209ENST00000441879 WDR7Q9Y4E6 1490 aa25.89■■□□□ 1.73
PCYT1A-209ENST00000441879 GLI2P10070 1586 aa25.89■■□□□ 1.73
PCYT1A-209ENST00000441879 ATP10BO94823 1461 aa25.87■■□□□ 1.73
PCYT1A-209ENST00000441879 CLIP1P30622 1438 aa25.85■■□□□ 1.73
PCYT1A-209ENST00000441879 NUP153P49790 1475 aaKnown RBP25.85■■□□□ 1.73
PCYT1A-209ENST00000441879 EPRSP07814 1512 aaKnown RBP25.84■■□□□ 1.73
PCYT1A-209ENST00000441879 HECW1Q76N89 1606 aa25.78■■□□□ 1.72
PCYT1A-209ENST00000441879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.78■■□□□ 1.72
PCYT1A-209ENST00000441879 HNRNPUL2Q1KMD3 747 aaKnown RBP25.78■■□□□ 1.72
PCYT1A-209ENST00000441879 PLEKHD1A6NEE1 506 aa25.75■■□□□ 1.71
PCYT1A-209ENST00000441879 CEP162Q5TB80 1403 aa25.72■■□□□ 1.71
PCYT1A-209ENST00000441879 ARID3CA6NKF2 412 aa25.72■■□□□ 1.71
PCYT1A-209ENST00000441879 CDK11AQ9UQ88 783 aaPredicted RBP25.72■■□□□ 1.71
PCYT1A-209ENST00000441879 CASKIN1Q8WXD9 1431 aa25.71■■□□□ 1.71
PCYT1A-209ENST00000441879 MAP3K4Q9Y6R4 1608 aa25.71■■□□□ 1.71
PCYT1A-209ENST00000441879 KCNH8Q96L42 1107 aa25.71■■□□□ 1.71
PCYT1A-209ENST00000441879 TEX14Q8IWB6 1497 aa25.7■■□□□ 1.7
PCYT1A-209ENST00000441879 CFAP43Q8NDM7 1665 aa25.69■■□□□ 1.7
PCYT1A-209ENST00000441879 ATP1B4Q9UN42 357 aaPredicted RBP25.68■■□□□ 1.7
PCYT1A-209ENST00000441879 FYCO1Q9BQS8 1478 aa25.67■■□□□ 1.7
PCYT1A-209ENST00000441879 LOC105371045A0A1W2PR82 267 aa25.67■■□□□ 1.7
PCYT1A-209ENST00000441879 TSPOAP1O95153 1857 aa25.66■■□□□ 1.7
PCYT1A-209ENST00000441879 CCDC18Q5T9S5 1454 aa25.66■■□□□ 1.7
PCYT1A-209ENST00000441879 CD109Q6YHK3 1445 aa25.65■■□□□ 1.7
PCYT1A-209ENST00000441879 MAGI3Q5TCQ9 1506 aa25.63■■□□□ 1.69
PCYT1A-209ENST00000441879 ABCA9Q8IUA7 1624 aa25.62■■□□□ 1.69
PCYT1A-209ENST00000441879 CDK13Q14004 1512 aaKnown RBP25.61■■□□□ 1.69
PCYT1A-209ENST00000441879 PCF11O94913 1555 aaKnown RBP25.61■■□□□ 1.69
PCYT1A-209ENST00000441879 PPRC1Q5VV67 1664 aaKnown RBP25.59■■□□□ 1.69
PCYT1A-209ENST00000441879 PHLDB1Q86UU1 1377 aa25.56■■□□□ 1.68
PCYT1A-209ENST00000441879 KDM6BO15054 1643 aa25.54■■□□□ 1.68
PCYT1A-209ENST00000441879 TROQ12816 1431 aaPredicted RBP25.53■■□□□ 1.68
PCYT1A-209ENST00000441879 LRRIQ1Q96JM4 1722 aa25.49■■□□□ 1.67
PCYT1A-209ENST00000441879 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.47■■□□□ 1.67
PCYT1A-209ENST00000441879 NEO1Q92859 1461 aa25.47■■□□□ 1.67
PCYT1A-209ENST00000441879 KIF14Q15058 1648 aa25.46■■□□□ 1.67
PCYT1A-209ENST00000441879 VPS8Q8N3P4 1428 aa25.45■■□□□ 1.66
PCYT1A-209ENST00000441879 CFAP74Q9C0B2 1584 aa25.42■■□□□ 1.66
PCYT1A-209ENST00000441879 ARAP3Q8WWN8 1544 aa25.42■■□□□ 1.66
PCYT1A-209ENST00000441879 TTC37Q6PGP7 1564 aa25.39■■□□□ 1.66
PCYT1A-209ENST00000441879 PLCH2O75038 1416 aa25.39■■□□□ 1.66
PCYT1A-209ENST00000441879 FANCAO15360 1455 aa25.36■■□□□ 1.65
PCYT1A-209ENST00000441879 MTUS2Q5JR59 1369 aa25.35■■□□□ 1.65
PCYT1A-209ENST00000441879 MYO5CQ9NQX4 1742 aa25.34■■□□□ 1.65
PCYT1A-209ENST00000441879 COL17A1Q9UMD9 1497 aaPredicted RBP25.34■■□□□ 1.65
PCYT1A-209ENST00000441879 EFCAB2Q5VUJ9 269 aa25.33■■□□□ 1.65
PCYT1A-209ENST00000441879 AKNAQ7Z591 1439 aa25.31■■□□□ 1.64
PCYT1A-209ENST00000441879 MAP3K1Q13233 1512 aa25.31■■□□□ 1.64
PCYT1A-209ENST00000441879 EHBP1L1Q8N3D4 1523 aa25.3■■□□□ 1.64
PCYT1A-209ENST00000441879 TIAM1Q13009 1591 aa25.26■■□□□ 1.63
PCYT1A-209ENST00000441879 DENND4BO75064 1496 aaPredicted RBP25.25■■□□□ 1.63
PCYT1A-209ENST00000441879 ARHGAP5Q13017 1502 aa25.24■■□□□ 1.63
PCYT1A-209ENST00000441879 APLP2Q06481 763 aa25.24■■□□□ 1.63
PCYT1A-209ENST00000441879 PREX2Q70Z35 1606 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms