RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 CHD1O14646 1710 aa25.43■■□□□ 1.66
MCF2L-217ENST00000441756 DNAJC5Q9H3Z4 198 aa25.41■■□□□ 1.66
MCF2L-217ENST00000441756 CLIP1P30622 1438 aa25.4■■□□□ 1.66
MCF2L-217ENST00000441756 IQGAP2Q13576 1575 aa25.39■■□□□ 1.66
MCF2L-217ENST00000441756 NUP160Q12769 1436 aa25.39■■□□□ 1.66
MCF2L-217ENST00000441756 KIAA0586Q9BVV6 1533 aa25.38■■□□□ 1.65
MCF2L-217ENST00000441756 CEP170Q5SW79 1584 aa25.38■■□□□ 1.65
MCF2L-217ENST00000441756 EFCAB5A4FU69 1503 aa25.33■■□□□ 1.65
MCF2L-217ENST00000441756 UGGT2Q9NYU1 1516 aa25.26■■□□□ 1.63
MCF2L-217ENST00000441756 RANGAP1P46060 587 aaPredicted RBP25.25■■□□□ 1.63
MCF2L-217ENST00000441756 ARHGAP35Q9NRY4 1499 aa25.24■■□□□ 1.63
MCF2L-217ENST00000441756 SAMD9Q5K651 1589 aa25.22■■□□□ 1.63
MCF2L-217ENST00000441756 CLASP1Q7Z460 1538 aa25.17■■□□□ 1.62
MCF2L-217ENST00000441756 ARAP1Q96P48 1450 aa25.17■■□□□ 1.62
MCF2L-217ENST00000441756 VPS8Q8N3P4 1428 aa25.14■■□□□ 1.62
MCF2L-217ENST00000441756 CARMIL2Q6F5E8 1435 aa25.13■■□□□ 1.61
MCF2L-217ENST00000441756 KIAA0556O60303 1618 aa25.12■■□□□ 1.61
MCF2L-217ENST00000441756 SHROOM2Q13796 1616 aa25.12■■□□□ 1.61
MCF2L-217ENST00000441756 JPH4Q96JJ6 628 aa25.1■■□□□ 1.61
MCF2L-217ENST00000441756 DISP1Q96F81 1524 aa25.08■■□□□ 1.61
MCF2L-217ENST00000441756 OSCARQ8IYS5 282 aa25.08■■□□□ 1.61
MCF2L-217ENST00000441756 FHOD3Q2V2M9 1422 aa25.08■■□□□ 1.61
MCF2L-217ENST00000441756 FMN1Q68DA7 1419 aa25.07■■□□□ 1.6
MCF2L-217ENST00000441756 P3H3Q8IVL6 736 aa25.03■■□□□ 1.6
MCF2L-217ENST00000441756 PRG4Q92954 1404 aaPredicted RBP25.03■■□□□ 1.6
MCF2L-217ENST00000441756 FYCO1Q9BQS8 1478 aa24.96■■□□□ 1.59
MCF2L-217ENST00000441756 PCF11O94913 1555 aaKnown RBP24.93■■□□□ 1.58
MCF2L-217ENST00000441756 CASKIN1Q8WXD9 1431 aa24.93■■□□□ 1.58
MCF2L-217ENST00000441756 APLP2Q06481 763 aa24.9■■□□□ 1.58
MCF2L-217ENST00000441756 HECW1Q76N89 1606 aa24.88■■□□□ 1.57
MCF2L-217ENST00000441756 PTPRGP23470 1445 aa24.84■■□□□ 1.57
MCF2L-217ENST00000441756 RAPGEF6Q8TEU7 1601 aa24.83■■□□□ 1.57
MCF2L-217ENST00000441756 MAP3K1Q13233 1512 aa24.83■■□□□ 1.57
MCF2L-217ENST00000441756 ERCC6L2Q5T890 1561 aa24.83■■□□□ 1.57
MCF2L-217ENST00000441756 CCDC18Q5T9S5 1454 aa24.8■■□□□ 1.56
MCF2L-217ENST00000441756 CFAP43Q8NDM7 1665 aa24.78■■□□□ 1.56
MCF2L-217ENST00000441756 ATP1B4Q9UN42 357 aaPredicted RBP24.78■■□□□ 1.56
MCF2L-217ENST00000441756 TTBK1Q5TCY1 1321 aaPredicted RBP24.78■■□□□ 1.56
MCF2L-217ENST00000441756 ABCA8O94911 1581 aa24.77■■□□□ 1.56
MCF2L-217ENST00000441756 TIAM1Q13009 1591 aa24.77■■□□□ 1.56
MCF2L-217ENST00000441756 PLB1Q6P1J6 1458 aa24.74■■□□□ 1.55
MCF2L-217ENST00000441756 EPRSP07814 1512 aaKnown RBP24.71■■□□□ 1.55
MCF2L-217ENST00000441756 NUP153P49790 1475 aaKnown RBP24.7■■□□□ 1.55
MCF2L-217ENST00000441756 UACAQ9BZF9 1416 aa24.7■■□□□ 1.55
MCF2L-217ENST00000441756 ARHGEF11O15085 1522 aa24.69■■□□□ 1.54
MCF2L-217ENST00000441756 ABCC2Q92887 1545 aa24.67■■□□□ 1.54
MCF2L-217ENST00000441756 LRRIQ1Q96JM4 1722 aa24.67■■□□□ 1.54
MCF2L-217ENST00000441756 UHRF1BP1LA0JNW5 1464 aa24.65■■□□□ 1.54
MCF2L-217ENST00000441756 LRRC9Q6ZRR7 1453 aa24.63■■□□□ 1.53
MCF2L-217ENST00000441756 CDK13Q14004 1512 aaKnown RBP24.61■■□□□ 1.53
MCF2L-217ENST00000441756 EHBP1L1Q8N3D4 1523 aa24.61■■□□□ 1.53
MCF2L-217ENST00000441756 MTUS2Q5JR59 1369 aa24.59■■□□□ 1.53
MCF2L-217ENST00000441756 CDK11AQ9UQ88 783 aaPredicted RBP24.59■■□□□ 1.53
MCF2L-217ENST00000441756 RIMBP3CA6NJZ7 1639 aa24.59■■□□□ 1.53
MCF2L-217ENST00000441756 RIMBP3BA6NNM3 1639 aa24.59■■□□□ 1.53
MCF2L-217ENST00000441756 RIMBP3Q9UFD9 1639 aa24.59■■□□□ 1.53
MCF2L-217ENST00000441756 PPARGC1BQ86YN6 1023 aaKnown RBP24.55■■□□□ 1.52
MCF2L-217ENST00000441756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.54■■□□□ 1.52
MCF2L-217ENST00000441756 HNRNPUL2Q1KMD3 747 aaKnown RBP24.54■■□□□ 1.52
MCF2L-217ENST00000441756 KANK4Q5T7N3 995 aaPredicted RBP24.54■■□□□ 1.52
MCF2L-217ENST00000441756 ATP10BO94823 1461 aa24.53■■□□□ 1.52
MCF2L-217ENST00000441756 ADCY10Q96PN6 1610 aa24.53■■□□□ 1.52
MCF2L-217ENST00000441756 KDM5BQ9UGL1 1544 aa24.51■■□□□ 1.51
MCF2L-217ENST00000441756 ARID3CA6NKF2 412 aa24.51■■□□□ 1.51
MCF2L-217ENST00000441756 SUPT6HQ7KZ85 1726 aaKnown RBP24.49■■□□□ 1.51
MCF2L-217ENST00000441756 ZCCHC11Q5TAX3 1644 aaKnown RBP24.48■■□□□ 1.51
MCF2L-217ENST00000441756 MAGI3Q5TCQ9 1506 aa24.47■■□□□ 1.51
MCF2L-217ENST00000441756 TROQ12816 1431 aaPredicted RBP24.47■■□□□ 1.51
MCF2L-217ENST00000441756 PLEKHD1A6NEE1 506 aa24.45■■□□□ 1.5
MCF2L-217ENST00000441756 TRIM26Q12899 539 aaPredicted RBP24.43■■□□□ 1.5
MCF2L-217ENST00000441756 NCOA2Q15596 1464 aa24.4■■□□□ 1.5
MCF2L-217ENST00000441756 KIF14Q15058 1648 aa24.4■■□□□ 1.5
MCF2L-217ENST00000441756 NPM1P06748 294 aaKnown RBP eCLIP24.4■■□□□ 1.5
MCF2L-217ENST00000441756 CYB5RLQ6IPT4 315 aa24.35■■□□□ 1.49
MCF2L-217ENST00000441756 PHLDB1Q86UU1 1377 aa24.32■■□□□ 1.48
MCF2L-217ENST00000441756 WDR7Q9Y4E6 1490 aa24.32■■□□□ 1.48
MCF2L-217ENST00000441756 MYOM3Q5VTT5 1437 aa24.31■■□□□ 1.48
MCF2L-217ENST00000441756 RRBP1Q9P2E9 1410 aaKnown RBP24.3■■□□□ 1.48
MCF2L-217ENST00000441756 ITSN2Q9NZM3 1697 aa24.29■■□□□ 1.48
MCF2L-217ENST00000441756 CCNB3Q8WWL7 1395 aa24.29■■□□□ 1.48
MCF2L-217ENST00000441756 ASXL2Q76L83 1435 aa24.27■■□□□ 1.48
MCF2L-217ENST00000441756 FGD6Q6ZV73 1430 aa24.25■■□□□ 1.47
MCF2L-217ENST00000441756 MAPKBP1O60336 1514 aa24.25■■□□□ 1.47
MCF2L-217ENST00000441756 MIA2Q96PC5 1412 aa24.24■■□□□ 1.47
MCF2L-217ENST00000441756 ABCC10Q5T3U5 1492 aa24.24■■□□□ 1.47
MCF2L-217ENST00000441756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.2■■□□□ 1.46
MCF2L-217ENST00000441756 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.19■■□□□ 1.461e-7■■□□□ 13.6
MCF2L-217ENST00000441756 PCGF6Q9BYE7 350 aa24.19■■□□□ 1.46
MCF2L-217ENST00000441756 TTC37Q6PGP7 1564 aa24.17■■□□□ 1.46
MCF2L-217ENST00000441756 GPATCH8Q9UKJ3 1502 aaKnown RBP24.17■■□□□ 1.46
MCF2L-217ENST00000441756 PTPN23Q9H3S7 1636 aa24.17■■□□□ 1.46
MCF2L-217ENST00000441756 CDC42BPAQ5VT25 1732 aa24.16■■□□□ 1.46
MCF2L-217ENST00000441756 KCNH8Q96L42 1107 aa24.16■■□□□ 1.46
MCF2L-217ENST00000441756 PREX2Q70Z35 1606 aa24.16■■□□□ 1.46
MCF2L-217ENST00000441756 MYO5CQ9NQX4 1742 aa24.15■■□□□ 1.46
MCF2L-217ENST00000441756 TCOF1Q13428 1488 aaKnown RBP24.15■■□□□ 1.46
MCF2L-217ENST00000441756 ABCA9Q8IUA7 1624 aa24.14■■□□□ 1.46
MCF2L-217ENST00000441756 CFDP1Q9UEE9 299 aaPredicted RBP24.12■■□□□ 1.45
MCF2L-217ENST00000441756 FAM50AQ14320 339 aaKnown RBP24.11■■□□□ 1.45
MCF2L-217ENST00000441756 ARAP3Q8WWN8 1544 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms