RNA–Protein interactions for RNA: ENST00000441517.6

SCAP-207, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,748 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-207ENST00000441517 TDRD9Q8NDG6 1382 aaKnown RBP21.14■□□□□ 0.98
SCAP-207ENST00000441517 SUPT16HQ9Y5B9 1047 aaKnown RBP21.13■□□□□ 0.97
SCAP-207ENST00000441517 DNAJC5BQ9UF47 199 aa21.12■□□□□ 0.97
SCAP-207ENST00000441517 SALL2Q9Y467 1007 aaPredicted RBP21.09■□□□□ 0.97
SCAP-207ENST00000441517 ERICH6Q7L0X2 663 aa21.08■□□□□ 0.96
SCAP-207ENST00000441517 KIF21BO75037 1637 aa21.07■□□□□ 0.96
SCAP-207ENST00000441517 FHOD3Q2V2M9 1422 aa21.06■□□□□ 0.96
SCAP-207ENST00000441517 ARAP1Q96P48 1450 aa21.05■□□□□ 0.96
SCAP-207ENST00000441517 MYT1LQ9UL68 1186 aa21.04■□□□□ 0.96
SCAP-207ENST00000441517 BICRAQ9NZM4 1560 aa21.03■□□□□ 0.96
SCAP-207ENST00000441517 KDM2AQ9Y2K7 1162 aa21■□□□□ 0.95
SCAP-207ENST00000441517 IGF1RP08069 1367 aa20.99■□□□□ 0.95
SCAP-207ENST00000441517 RAD54L2Q9Y4B4 1467 aa20.94■□□□□ 0.94
SCAP-207ENST00000441517 PHLDB1Q86UU1 1377 aa20.91■□□□□ 0.94
SCAP-207ENST00000441517 UNC13AQ9UPW8 1703 aa20.91■□□□□ 0.94
SCAP-207ENST00000441517 SETD5Q9C0A6 1442 aa20.91■□□□□ 0.94
SCAP-207ENST00000441517 CADPSQ9ULU8 1353 aa20.91■□□□□ 0.94
SCAP-207ENST00000441517 SLC4A1APQ9BWU0 796 aaKnown RBP20.89■□□□□ 0.93
SCAP-207ENST00000441517 EIF4G1Q04637 1599 aaKnown RBP20.88■□□□□ 0.93
SCAP-207ENST00000441517 SENP3Q9H4L4 574 aaPredicted RBP20.87■□□□□ 0.93
SCAP-207ENST00000441517 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.87■□□□□ 0.93
SCAP-207ENST00000441517 MRS2Q9HD23 443 aa20.86■□□□□ 0.93
SCAP-207ENST00000441517 PPP1R15AO75807 674 aaPredicted RBP20.85■□□□□ 0.93
SCAP-207ENST00000441517 ARHGAP35Q9NRY4 1499 aa20.84■□□□□ 0.93
SCAP-207ENST00000441517 CUX1P39880 1505 aa20.83■□□□□ 0.92
SCAP-207ENST00000441517 CLSPNQ9HAW4 1339 aa20.82■□□□□ 0.92
SCAP-207ENST00000441517 NESP48681 1621 aa20.81■□□□□ 0.92
SCAP-207ENST00000441517 FGD5Q6ZNL6 1462 aa20.8■□□□□ 0.92
SCAP-207ENST00000441517 RGL3Q3MIN7 710 aa20.79■□□□□ 0.92
SCAP-207ENST00000441517 CHMP7Q8WUX9 453 aaPredicted RBP20.79■□□□□ 0.92
SCAP-207ENST00000441517 PRXQ9BXM0 1461 aa20.78■□□□□ 0.92
SCAP-207ENST00000441517 HSPA5P11021 654 aaKnown RBP20.77■□□□□ 0.92
SCAP-207ENST00000441517 EIF4G2P78344 907 aaKnown RBP eCLIP20.77■□□□□ 0.92
SCAP-207ENST00000441517 TSHZ2Q9NRE2 1034 aa20.74■□□□□ 0.91
SCAP-207ENST00000441517 ZNF644Q9H582 1327 aaPredicted RBP20.72■□□□□ 0.91
SCAP-207ENST00000441517 CDK11AQ9UQ88 783 aaPredicted RBP20.71■□□□□ 0.91
SCAP-207ENST00000441517 FHAD1B1AJZ9 1412 aa20.71■□□□□ 0.91
SCAP-207ENST00000441517 FANCD2Q9BXW9 1451 aa20.7■□□□□ 0.9
SCAP-207ENST00000441517 L3MBTL2Q969R5 705 aa20.7■□□□□ 0.9
SCAP-207ENST00000441517 NCAPD3P42695 1498 aa20.69■□□□□ 0.9
SCAP-207ENST00000441517 CFDP1Q9UEE9 299 aaPredicted RBP20.68■□□□□ 0.9
SCAP-207ENST00000441517 B4GALNT3Q6L9W6 998 aa20.68■□□□□ 0.9
SCAP-207ENST00000441517 TOP2BQ02880 1626 aa20.67■□□□□ 0.9
SCAP-207ENST00000441517 MPHOSPH9Q99550 1183 aa20.65■□□□□ 0.9
SCAP-207ENST00000441517 CFTRP13569 1480 aa20.64■□□□□ 0.89
SCAP-207ENST00000441517 NPM2Q86SE8 214 aaKnown RBP20.63■□□□□ 0.89
SCAP-207ENST00000441517 CCDC184Q52MB2 194 aa20.6■□□□□ 0.89
SCAP-207ENST00000441517 TMC1Q8TDI8 760 aa20.59■□□□□ 0.89
SCAP-207ENST00000441517 LRRC9Q6ZRR7 1453 aa20.58■□□□□ 0.89
SCAP-207ENST00000441517 RRBP1Q9P2E9 1410 aaKnown RBP20.57■□□□□ 0.88
SCAP-207ENST00000441517 TSPY4P0CV99 314 aa20.54■□□□□ 0.88
SCAP-207ENST00000441517 TSPY10P0CW01 314 aa20.54■□□□□ 0.88
SCAP-207ENST00000441517 RBM19Q9Y4C8 960 aaKnown RBP20.54■□□□□ 0.88
SCAP-207ENST00000441517 PDS5BQ9NTI5 1447 aa20.53■□□□□ 0.88
SCAP-207ENST00000441517 WDR97A6NE52 1622 aa20.52■□□□□ 0.88
SCAP-207ENST00000441517 NBR1Q14596 966 aa20.52■□□□□ 0.88
SCAP-207ENST00000441517 MYT1Q01538 1121 aa20.52■□□□□ 0.87
SCAP-207ENST00000441517 PKD2Q13563 968 aa20.52■□□□□ 0.87
SCAP-207ENST00000441517 AQRO60306 1485 aaKnown RBP eCLIP20.52■□□□□ 0.872e-9■■■■□ 25.7
SCAP-207ENST00000441517 DCAF11Q8TEB1 546 aa20.5■□□□□ 0.87
SCAP-207ENST00000441517 CARD11Q9BXL7 1154 aa20.49■□□□□ 0.87
SCAP-207ENST00000441517 PLEKHD1A6NEE1 506 aa20.49■□□□□ 0.87
SCAP-207ENST00000441517 BCL11AQ9H165 835 aa20.47■□□□□ 0.87
SCAP-207ENST00000441517 FMN1Q68DA7 1419 aa20.46■□□□□ 0.87
SCAP-207ENST00000441517 ERICH3Q5RHP9 1530 aa20.46■□□□□ 0.87
SCAP-207ENST00000441517 CCDC136Q96JN2 1154 aa20.45■□□□□ 0.87
SCAP-207ENST00000441517 CHGAP10645 457 aaKnown RBP20.45■□□□□ 0.86
SCAP-207ENST00000441517 CCDC18Q5T9S5 1454 aa20.45■□□□□ 0.86
SCAP-207ENST00000441517 HNRNPMP52272 730 aaKnown RBP eCLIP20.44■□□□□ 0.862e-7■■■■■ 28.9
SCAP-207ENST00000441517 FGD6Q6ZV73 1430 aa20.43■□□□□ 0.86
SCAP-207ENST00000441517 WASHC2AQ641Q2 1341 aa20.43■□□□□ 0.86
SCAP-207ENST00000441517 C11orf95C9JLR9 678 aaPredicted RBP20.42■□□□□ 0.86
SCAP-207ENST00000441517 CC2D1BQ5T0F9 858 aaKnown RBP20.42■□□□□ 0.86
SCAP-207ENST00000441517 PEG3Q9GZU2 1588 aa20.41■□□□□ 0.86
SCAP-207ENST00000441517 POLA1P09884 1462 aaPredicted RBP20.41■□□□□ 0.86
SCAP-207ENST00000441517 CCER2I3L3R5 266 aa20.4■□□□□ 0.86
SCAP-207ENST00000441517 NBPF8Q3BBV2 869 aa20.39■□□□□ 0.85
SCAP-207ENST00000441517 ANP32EQ9BTT0 268 aa20.39■□□□□ 0.85
SCAP-207ENST00000441517 TIMELESSQ9UNS1 1208 aa20.37■□□□□ 0.85
SCAP-207ENST00000441517 GAPVD1Q14C86 1478 aa20.36■□□□□ 0.85
SCAP-207ENST00000441517 CC2D2AQ9P2K1 1620 aa20.35■□□□□ 0.85
SCAP-207ENST00000441517 TIAM1Q13009 1591 aa20.35■□□□□ 0.85
SCAP-207ENST00000441517 PTPRKQ15262 1439 aa20.32■□□□□ 0.84
SCAP-207ENST00000441517 PRKRIP1Q9H875 184 aaPredicted RBP20.32■□□□□ 0.84
SCAP-207ENST00000441517 NCOA2Q15596 1464 aa20.32■□□□□ 0.84
SCAP-207ENST00000441517 TOPBP1Q92547 1522 aa20.31■□□□□ 0.84
SCAP-207ENST00000441517 NUP155O75694 1391 aa20.29■□□□□ 0.84
SCAP-207ENST00000441517 JPH4Q96JJ6 628 aa20.29■□□□□ 0.84
SCAP-207ENST00000441517 ERCC6Q03468 1493 aa20.28■□□□□ 0.84
SCAP-207ENST00000441517 ST20-MTHFSA0A0A6YYL1 179 aa20.28■□□□□ 0.84
SCAP-207ENST00000441517 PCF11O94913 1555 aaKnown RBP20.28■□□□□ 0.84
SCAP-207ENST00000441517 MAPKBP1O60336 1514 aa20.27■□□□□ 0.83
SCAP-207ENST00000441517 HMGXB3Q12766 1538 aa20.26■□□□□ 0.83
SCAP-207ENST00000441517 CASKIN1Q8WXD9 1431 aa20.26■□□□□ 0.83
SCAP-207ENST00000441517 TNNT2P45379 298 aaPredicted RBP20.25■□□□□ 0.83
SCAP-207ENST00000441517 MYOM3Q5VTT5 1437 aa20.25■□□□□ 0.83
SCAP-207ENST00000441517 PPP4R2Q9NY27 417 aa20.22■□□□□ 0.83
SCAP-207ENST00000441517 KIF7Q2M1P5 1343 aa20.22■□□□□ 0.83
SCAP-207ENST00000441517 UACAQ9BZF9 1416 aa20.21■□□□□ 0.83
SCAP-207ENST00000441517 BIVM-ERCC5R4GMW8 1640 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms