RNA–Protein interactions for RNA: ENST00000440978.1

EBF3-203, Transcript of early B cell factor 3, humanhuman

TSL 3

Gene EBF3, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-203ENST00000440978 PRXQ9BXM0 1461 aa19.85■□□□□ 0.77
EBF3-203ENST00000440978 FAM9AQ8IZU1 332 aaPredicted RBP19.77■□□□□ 0.76
EBF3-203ENST00000440978 KIAA0586Q9BVV6 1533 aa19.76■□□□□ 0.75
EBF3-203ENST00000440978 KIF21BO75037 1637 aa19.73■□□□□ 0.75
EBF3-203ENST00000440978 SHROOM2Q13796 1616 aa19.73■□□□□ 0.75
EBF3-203ENST00000440978 ARHGEF11O15085 1522 aa19.71■□□□□ 0.75
EBF3-203ENST00000440978 RIMBP3CA6NJZ7 1639 aa19.69■□□□□ 0.74
EBF3-203ENST00000440978 RIMBP3BA6NNM3 1639 aa19.69■□□□□ 0.74
EBF3-203ENST00000440978 RIMBP3Q9UFD9 1639 aa19.69■□□□□ 0.74
EBF3-203ENST00000440978 IQGAP2Q13576 1575 aa19.67■□□□□ 0.74
EBF3-203ENST00000440978 CTTNBP2Q8WZ74 1663 aa19.67■□□□□ 0.74
EBF3-203ENST00000440978 JPH4Q96JJ6 628 aa19.66■□□□□ 0.74
EBF3-203ENST00000440978 GOLGA3Q08378 1498 aa19.62■□□□□ 0.73
EBF3-203ENST00000440978 PRG4Q92954 1404 aaPredicted RBP19.61■□□□□ 0.73
EBF3-203ENST00000440978 UGGT2Q9NYU1 1516 aa19.58■□□□□ 0.73
EBF3-203ENST00000440978 ERCC6L2Q5T890 1561 aa19.57■□□□□ 0.72
EBF3-203ENST00000440978 ARAP1Q96P48 1450 aa19.55■□□□□ 0.72
EBF3-203ENST00000440978 CARMIL2Q6F5E8 1435 aa19.55■□□□□ 0.72
EBF3-203ENST00000440978 UBTFP17480 764 aaKnown RBP19.51■□□□□ 0.71
EBF3-203ENST00000440978 DISP1Q96F81 1524 aa19.51■□□□□ 0.71
EBF3-203ENST00000440978 KIAA0556O60303 1618 aa19.48■□□□□ 0.71
EBF3-203ENST00000440978 CYB5RLQ6IPT4 315 aa19.48■□□□□ 0.71
EBF3-203ENST00000440978 TNIKQ9UKE5 1360 aa19.46■□□□□ 0.71
EBF3-203ENST00000440978 EHMT2Q96KQ7 1210 aa19.45■□□□□ 0.7
EBF3-203ENST00000440978 SAMD9Q5K651 1589 aa19.44■□□□□ 0.7
EBF3-203ENST00000440978 PTPRGP23470 1445 aa19.42■□□□□ 0.7
EBF3-203ENST00000440978 EFCAB5A4FU69 1503 aa19.41■□□□□ 0.7
EBF3-203ENST00000440978 POTEDQ86YR6 584 aa19.36■□□□□ 0.69
EBF3-203ENST00000440978 RANGAP1P46060 587 aaPredicted RBP19.33■□□□□ 0.68
EBF3-203ENST00000440978 TTBK1Q5TCY1 1321 aaPredicted RBP19.3■□□□□ 0.68
EBF3-203ENST00000440978 UHRF1BP1LA0JNW5 1464 aa19.3■□□□□ 0.68
EBF3-203ENST00000440978 P3H3Q8IVL6 736 aa19.3■□□□□ 0.68
EBF3-203ENST00000440978 UACAQ9BZF9 1416 aa19.3■□□□□ 0.68
EBF3-203ENST00000440978 ADCY10Q96PN6 1610 aa19.29■□□□□ 0.68
EBF3-203ENST00000440978 ARHGAP35Q9NRY4 1499 aa19.29■□□□□ 0.68
EBF3-203ENST00000440978 FHOD3Q2V2M9 1422 aa19.28■□□□□ 0.68
EBF3-203ENST00000440978 ABCC2Q92887 1545 aa19.27■□□□□ 0.68
EBF3-203ENST00000440978 LOC105371045A0A1W2PR82 267 aa19.26■□□□□ 0.67
EBF3-203ENST00000440978 CLIP1P30622 1438 aa19.25■□□□□ 0.67
EBF3-203ENST00000440978 ABCA8O94911 1581 aa19.25■□□□□ 0.67
EBF3-203ENST00000440978 PLB1Q6P1J6 1458 aa19.23■□□□□ 0.67
EBF3-203ENST00000440978 NPM1P06748 294 aaKnown RBP eCLIP19.23■□□□□ 0.67
EBF3-203ENST00000440978 CEP162Q5TB80 1403 aa19.22■□□□□ 0.67
EBF3-203ENST00000440978 FMN1Q68DA7 1419 aa19.22■□□□□ 0.67
EBF3-203ENST00000440978 RAPGEF6Q8TEU7 1601 aa19.2■□□□□ 0.66
EBF3-203ENST00000440978 KDM5BQ9UGL1 1544 aa19.19■□□□□ 0.66
EBF3-203ENST00000440978 MAPKBP1O60336 1514 aa19.17■□□□□ 0.66
EBF3-203ENST00000440978 ZCCHC11Q5TAX3 1644 aaKnown RBP19.14■□□□□ 0.65
EBF3-203ENST00000440978 NUP153P49790 1475 aaKnown RBP19.11■□□□□ 0.65
EBF3-203ENST00000440978 HECW1Q76N89 1606 aa19.11■□□□□ 0.65
EBF3-203ENST00000440978 ATP10BO94823 1461 aa19.08■□□□□ 0.64
EBF3-203ENST00000440978 CASKIN1Q8WXD9 1431 aa19.08■□□□□ 0.64
EBF3-203ENST00000440978 ASXL2Q76L83 1435 aa19.07■□□□□ 0.64
EBF3-203ENST00000440978 PCF11O94913 1555 aaKnown RBP19.06■□□□□ 0.64
EBF3-203ENST00000440978 FYCO1Q9BQS8 1478 aa19.05■□□□□ 0.64
EBF3-203ENST00000440978 ABCC10Q5T3U5 1492 aa19.03■□□□□ 0.64
EBF3-203ENST00000440978 WDR7Q9Y4E6 1490 aa19.03■□□□□ 0.64
EBF3-203ENST00000440978 EPRSP07814 1512 aaKnown RBP19.02■□□□□ 0.64
EBF3-203ENST00000440978 TRHP20396 242 aaPredicted RBP19.02■□□□□ 0.64
EBF3-203ENST00000440978 ATP1B4Q9UN42 357 aaPredicted RBP19.01■□□□□ 0.63
EBF3-203ENST00000440978 DIP2BQ9P265 1576 aa19.01■□□□□ 0.63
EBF3-203ENST00000440978 ARID3CA6NKF2 412 aa19■□□□□ 0.63
EBF3-203ENST00000440978 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19■□□□□ 0.63
EBF3-203ENST00000440978 HNRNPUL2Q1KMD3 747 aaKnown RBP19■□□□□ 0.63
EBF3-203ENST00000440978 CCDC18Q5T9S5 1454 aa19■□□□□ 0.63
EBF3-203ENST00000440978 VPS8Q8N3P4 1428 aa18.99■□□□□ 0.63
EBF3-203ENST00000440978 CDK13Q14004 1512 aaKnown RBP18.98■□□□□ 0.63
EBF3-203ENST00000440978 KIF13AQ9H1H9 1805 aa18.97■□□□□ 0.63
EBF3-203ENST00000440978 GLI2P10070 1586 aa18.97■□□□□ 0.63
EBF3-203ENST00000440978 LRRIQ1Q96JM4 1722 aa18.96■□□□□ 0.63
EBF3-203ENST00000440978 PLEKHD1A6NEE1 506 aa18.95■□□□□ 0.62
EBF3-203ENST00000440978 FAM69CQ0P6D2 419 aa18.95■□□□□ 0.62
EBF3-203ENST00000440978 CDK11AQ9UQ88 783 aaPredicted RBP18.95■□□□□ 0.62
EBF3-203ENST00000440978 MSH5O43196 834 aa18.88■□□□□ 0.61
EBF3-203ENST00000440978 KCNH8Q96L42 1107 aa18.88■□□□□ 0.61
EBF3-203ENST00000440978 CFAP43Q8NDM7 1665 aa18.87■□□□□ 0.61
EBF3-203ENST00000440978 MAP3K4Q9Y6R4 1608 aa18.87■□□□□ 0.61
EBF3-203ENST00000440978 TROQ12816 1431 aaPredicted RBP18.86■□□□□ 0.61
EBF3-203ENST00000440978 ABCA9Q8IUA7 1624 aa18.85■□□□□ 0.61
EBF3-203ENST00000440978 MAP3K1Q13233 1512 aa18.84■□□□□ 0.61
EBF3-203ENST00000440978 KIF14Q15058 1648 aa18.82■□□□□ 0.6
EBF3-203ENST00000440978 TIAM1Q13009 1591 aa18.82■□□□□ 0.6
EBF3-203ENST00000440978 MAGI3Q5TCQ9 1506 aa18.81■□□□□ 0.6
EBF3-203ENST00000440978 CD109Q6YHK3 1445 aa18.81■□□□□ 0.6
EBF3-203ENST00000440978 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.79■□□□□ 0.6
EBF3-203ENST00000440978 TEX14Q8IWB6 1497 aa18.79■□□□□ 0.6
EBF3-203ENST00000440978 MTUS2Q5JR59 1369 aa18.79■□□□□ 0.6
EBF3-203ENST00000440978 EHBP1L1Q8N3D4 1523 aa18.79■□□□□ 0.6
EBF3-203ENST00000440978 TSPOAP1O95153 1857 aa18.78■□□□□ 0.6
EBF3-203ENST00000440978 PPRC1Q5VV67 1664 aaKnown RBP18.78■□□□□ 0.6
EBF3-203ENST00000440978 TTC37Q6PGP7 1564 aa18.76■□□□□ 0.59
EBF3-203ENST00000440978 APLP2Q06481 763 aa18.76■□□□□ 0.59
EBF3-203ENST00000440978 LRRC9Q6ZRR7 1453 aa18.73■□□□□ 0.59
EBF3-203ENST00000440978 ARAP3Q8WWN8 1544 aa18.72■□□□□ 0.59
EBF3-203ENST00000440978 MYO5CQ9NQX4 1742 aa18.71■□□□□ 0.59
EBF3-203ENST00000440978 PLCH2O75038 1416 aa18.71■□□□□ 0.59
EBF3-203ENST00000440978 PHLDB1Q86UU1 1377 aa18.7■□□□□ 0.58
EBF3-203ENST00000440978 SUPT6HQ7KZ85 1726 aaKnown RBP18.69■□□□□ 0.58
EBF3-203ENST00000440978 CFAP74Q9C0B2 1584 aa18.69■□□□□ 0.58
EBF3-203ENST00000440978 NEO1Q92859 1461 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms