RNA–Protein interactions for RNA: ENST00000440915.1

AP004290.1-201, humanhuman

BASIC

Gene AP004290.1, Length 1,412 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004290.1-201ENST00000440915 GRIN2AQ12879 1464 aa16.65■□□□□ 0.26
AP004290.1-201ENST00000440915 CHMP7Q8WUX9 453 aaPredicted RBP16.65■□□□□ 0.26
AP004290.1-201ENST00000440915 FBLN2P98095 1184 aa16.63■□□□□ 0.25
AP004290.1-201ENST00000440915 CHD1O14646 1710 aa16.59■□□□□ 0.25
AP004290.1-201ENST00000440915 CTTNBP2Q8WZ74 1663 aa16.58■□□□□ 0.24
AP004290.1-201ENST00000440915 CEP170Q5SW79 1584 aa16.55■□□□□ 0.24
AP004290.1-201ENST00000440915 NUP160Q12769 1436 aa16.55■□□□□ 0.24
AP004290.1-201ENST00000440915 CEP162Q5TB80 1403 aa16.53■□□□□ 0.24
AP004290.1-201ENST00000440915 KIAA0586Q9BVV6 1533 aa16.52■□□□□ 0.23
AP004290.1-201ENST00000440915 RANGAP1P46060 587 aaPredicted RBP16.5■□□□□ 0.23
AP004290.1-201ENST00000440915 IQGAP2Q13576 1575 aa16.49■□□□□ 0.23
AP004290.1-201ENST00000440915 CLIP1P30622 1438 aa16.48■□□□□ 0.23
AP004290.1-201ENST00000440915 UGGT2Q9NYU1 1516 aa16.43■□□□□ 0.22
AP004290.1-201ENST00000440915 CLASP1Q7Z460 1538 aa16.42■□□□□ 0.22
AP004290.1-201ENST00000440915 ARHGAP35Q9NRY4 1499 aa16.42■□□□□ 0.22
AP004290.1-201ENST00000440915 EFCAB5A4FU69 1503 aa16.4■□□□□ 0.22
AP004290.1-201ENST00000440915 OSCARQ8IYS5 282 aa16.4■□□□□ 0.22
AP004290.1-201ENST00000440915 JPH4Q96JJ6 628 aa16.4■□□□□ 0.22
AP004290.1-201ENST00000440915 SAMD9Q5K651 1589 aa16.39■□□□□ 0.21
AP004290.1-201ENST00000440915 ARAP1Q96P48 1450 aa16.37■□□□□ 0.21
AP004290.1-201ENST00000440915 P3H3Q8IVL6 736 aa16.36■□□□□ 0.21
AP004290.1-201ENST00000440915 SHROOM2Q13796 1616 aa16.36■□□□□ 0.21
AP004290.1-201ENST00000440915 DISP1Q96F81 1524 aa16.35■□□□□ 0.21
AP004290.1-201ENST00000440915 FHOD3Q2V2M9 1422 aa16.34■□□□□ 0.21
AP004290.1-201ENST00000440915 KIAA0556O60303 1618 aa16.34■□□□□ 0.21
AP004290.1-201ENST00000440915 CARMIL2Q6F5E8 1435 aa16.32■□□□□ 0.2
AP004290.1-201ENST00000440915 PRG4Q92954 1404 aaPredicted RBP16.32■□□□□ 0.2
AP004290.1-201ENST00000440915 PPP6R1Q9UPN7 881 aa16.29■□□□□ 0.2
AP004290.1-201ENST00000440915 VPS8Q8N3P4 1428 aa16.29■□□□□ 0.2
AP004290.1-201ENST00000440915 ERCC6L2Q5T890 1561 aa16.26■□□□□ 0.19
AP004290.1-201ENST00000440915 ADRA2BP18089 450 aa16.26■□□□□ 0.19
AP004290.1-201ENST00000440915 FMN1Q68DA7 1419 aa16.25■□□□□ 0.19
AP004290.1-201ENST00000440915 TTBK1Q5TCY1 1321 aaPredicted RBP16.21■□□□□ 0.19
AP004290.1-201ENST00000440915 PCF11O94913 1555 aaKnown RBP16.2■□□□□ 0.18
AP004290.1-201ENST00000440915 PTPRGP23470 1445 aa16.19■□□□□ 0.18
AP004290.1-201ENST00000440915 CASKIN1Q8WXD9 1431 aa16.19■□□□□ 0.18
AP004290.1-201ENST00000440915 FYCO1Q9BQS8 1478 aa16.16■□□□□ 0.18
AP004290.1-201ENST00000440915 ATP1B4Q9UN42 357 aaPredicted RBP16.15■□□□□ 0.18
AP004290.1-201ENST00000440915 PLB1Q6P1J6 1458 aa16.14■□□□□ 0.17
AP004290.1-201ENST00000440915 RAPGEF6Q8TEU7 1601 aa16.14■□□□□ 0.17
AP004290.1-201ENST00000440915 ARHGEF11O15085 1522 aa16.14■□□□□ 0.17
AP004290.1-201ENST00000440915 ABCA8O94911 1581 aa16.13■□□□□ 0.17
AP004290.1-201ENST00000440915 HECW1Q76N89 1606 aa16.12■□□□□ 0.17
AP004290.1-201ENST00000440915 APLP2Q06481 763 aa16.11■□□□□ 0.17
AP004290.1-201ENST00000440915 UACAQ9BZF9 1416 aa16.09■□□□□ 0.17
AP004290.1-201ENST00000440915 RIMBP3CA6NJZ7 1639 aa16.09■□□□□ 0.17
AP004290.1-201ENST00000440915 RIMBP3BA6NNM3 1639 aa16.09■□□□□ 0.17
AP004290.1-201ENST00000440915 RIMBP3Q9UFD9 1639 aa16.09■□□□□ 0.17
AP004290.1-201ENST00000440915 NUP153P49790 1475 aaKnown RBP16.09■□□□□ 0.17
AP004290.1-201ENST00000440915 LRRIQ1Q96JM4 1722 aa16.08■□□□□ 0.17
AP004290.1-201ENST00000440915 MAP3K1Q13233 1512 aa16.08■□□□□ 0.16
AP004290.1-201ENST00000440915 TIAM1Q13009 1591 aa16.07■□□□□ 0.16
AP004290.1-201ENST00000440915 CCDC18Q5T9S5 1454 aa16.06■□□□□ 0.16
AP004290.1-201ENST00000440915 EPRSP07814 1512 aaKnown RBP16.06■□□□□ 0.16
AP004290.1-201ENST00000440915 CFAP43Q8NDM7 1665 aa16.05■□□□□ 0.16
AP004290.1-201ENST00000440915 UHRF1BP1LA0JNW5 1464 aa16.05■□□□□ 0.16
AP004290.1-201ENST00000440915 ABCC2Q92887 1545 aa16.05■□□□□ 0.16
AP004290.1-201ENST00000440915 ARID3CA6NKF2 412 aa16.04■□□□□ 0.16
AP004290.1-201ENST00000440915 PPARGC1BQ86YN6 1023 aaKnown RBP16.04■□□□□ 0.16
AP004290.1-201ENST00000440915 CDK13Q14004 1512 aaKnown RBP16.04■□□□□ 0.16
AP004290.1-201ENST00000440915 KANK4Q5T7N3 995 aaPredicted RBP16.02■□□□□ 0.16
AP004290.1-201ENST00000440915 ATP10BO94823 1461 aa16.01■□□□□ 0.15
AP004290.1-201ENST00000440915 ADCY10Q96PN6 1610 aa16.01■□□□□ 0.15
AP004290.1-201ENST00000440915 LRRC9Q6ZRR7 1453 aa15.99■□□□□ 0.15
AP004290.1-201ENST00000440915 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.99■□□□□ 0.15
AP004290.1-201ENST00000440915 HNRNPUL2Q1KMD3 747 aaKnown RBP15.99■□□□□ 0.15
AP004290.1-201ENST00000440915 CYB5RLQ6IPT4 315 aa15.97■□□□□ 0.15
AP004290.1-201ENST00000440915 MAGI3Q5TCQ9 1506 aa15.96■□□□□ 0.15
AP004290.1-201ENST00000440915 KDM5BQ9UGL1 1544 aa15.96■□□□□ 0.15
AP004290.1-201ENST00000440915 CDK11AQ9UQ88 783 aaPredicted RBP15.95■□□□□ 0.14
AP004290.1-201ENST00000440915 ZCCHC11Q5TAX3 1644 aaKnown RBP15.95■□□□□ 0.14
AP004290.1-201ENST00000440915 MTUS2Q5JR59 1369 aa15.95■□□□□ 0.14
AP004290.1-201ENST00000440915 EHBP1L1Q8N3D4 1523 aa15.94■□□□□ 0.14
AP004290.1-201ENST00000440915 PLEKHD1A6NEE1 506 aa15.92■□□□□ 0.14
AP004290.1-201ENST00000440915 NPM1P06748 294 aaKnown RBP eCLIP15.9■□□□□ 0.14
AP004290.1-201ENST00000440915 DNAJC5Q9H3Z4 198 aa15.9■□□□□ 0.14
AP004290.1-201ENST00000440915 TROQ12816 1431 aaPredicted RBP15.9■□□□□ 0.14
AP004290.1-201ENST00000440915 PIAS4Q8N2W9 510 aaPredicted RBP15.88■□□□□ 0.13
AP004290.1-201ENST00000440915 SUPT6HQ7KZ85 1726 aaKnown RBP15.87■□□□□ 0.13
AP004290.1-201ENST00000440915 NCOA2Q15596 1464 aa15.86■□□□□ 0.13
AP004290.1-201ENST00000440915 KIF14Q15058 1648 aa15.83■□□□□ 0.12
AP004290.1-201ENST00000440915 ASXL2Q76L83 1435 aa15.83■□□□□ 0.12
AP004290.1-201ENST00000440915 WDR7Q9Y4E6 1490 aa15.82■□□□□ 0.12
AP004290.1-201ENST00000440915 PHLDB1Q86UU1 1377 aa15.82■□□□□ 0.12
AP004290.1-201ENST00000440915 KCNH8Q96L42 1107 aa15.8■□□□□ 0.12
AP004290.1-201ENST00000440915 TRIM26Q12899 539 aaPredicted RBP15.79■□□□□ 0.12
AP004290.1-201ENST00000440915 MAPKBP1O60336 1514 aa15.79■□□□□ 0.12
AP004290.1-201ENST00000440915 ABCC10Q5T3U5 1492 aa15.79■□□□□ 0.12
AP004290.1-201ENST00000440915 CCNB3Q8WWL7 1395 aa15.76■□□□□ 0.11
AP004290.1-201ENST00000440915 MYOM3Q5VTT5 1437 aa15.76■□□□□ 0.11
AP004290.1-201ENST00000440915 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.76■□□□□ 0.11
AP004290.1-201ENST00000440915 RRBP1Q9P2E9 1410 aaKnown RBP15.75■□□□□ 0.11
AP004290.1-201ENST00000440915 TTC37Q6PGP7 1564 aa15.74■□□□□ 0.11
AP004290.1-201ENST00000440915 GPATCH8Q9UKJ3 1502 aaKnown RBP15.74■□□□□ 0.11
AP004290.1-201ENST00000440915 FGD6Q6ZV73 1430 aa15.74■□□□□ 0.11
AP004290.1-201ENST00000440915 CDC42BPAQ5VT25 1732 aa15.72■□□□□ 0.11
AP004290.1-201ENST00000440915 ITSN2Q9NZM3 1697 aa15.72■□□□□ 0.11
AP004290.1-201ENST00000440915 MIA2Q96PC5 1412 aa15.71■□□□□ 0.11
AP004290.1-201ENST00000440915 ABCA9Q8IUA7 1624 aa15.71■□□□□ 0.11
AP004290.1-201ENST00000440915 PREX2Q70Z35 1606 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms