RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 CHMP7Q8WUX9 453 aaPredicted RBP31.91■■■□□ 2.7
VRK2-207ENST00000440705 ARHGAP35Q9NRY4 1499 aa31.84■■■□□ 2.69
VRK2-207ENST00000440705 FBLN2P98095 1184 aa31.81■■■□□ 2.68
VRK2-207ENST00000440705 VPS8Q8N3P4 1428 aa31.79■■■□□ 2.68
VRK2-207ENST00000440705 ARAP1Q96P48 1450 aa31.79■■■□□ 2.68
VRK2-207ENST00000440705 EFCAB5A4FU69 1503 aa31.77■■■□□ 2.68
VRK2-207ENST00000440705 IQGAP2Q13576 1575 aa31.76■■■□□ 2.67
VRK2-207ENST00000440705 KIAA0586Q9BVV6 1533 aa31.75■■■□□ 2.67
VRK2-207ENST00000440705 NUP160Q12769 1436 aa31.7■■■□□ 2.66
VRK2-207ENST00000440705 CEP170Q5SW79 1584 aa31.69■■■□□ 2.66
VRK2-207ENST00000440705 SAMD9Q5K651 1589 aa31.65■■■□□ 2.66
VRK2-207ENST00000440705 CHD1O14646 1710 aa31.64■■■□□ 2.65
VRK2-207ENST00000440705 UGGT2Q9NYU1 1516 aa31.61■■■□□ 2.65
VRK2-207ENST00000440705 P3H3Q8IVL6 736 aa31.6■■■□□ 2.65
VRK2-207ENST00000440705 FHOD3Q2V2M9 1422 aa31.57■■■□□ 2.65
VRK2-207ENST00000440705 APLP2Q06481 763 aa31.54■■■□□ 2.64
VRK2-207ENST00000440705 FMN1Q68DA7 1419 aa31.5■■■□□ 2.63
VRK2-207ENST00000440705 JPH4Q96JJ6 628 aa31.48■■■□□ 2.63
VRK2-207ENST00000440705 DISP1Q96F81 1524 aa31.43■■■□□ 2.62
VRK2-207ENST00000440705 PPARGC1BQ86YN6 1023 aaKnown RBP31.43■■■□□ 2.62
VRK2-207ENST00000440705 KIAA0556O60303 1618 aa31.42■■■□□ 2.62
VRK2-207ENST00000440705 CARMIL2Q6F5E8 1435 aa31.39■■■□□ 2.62
VRK2-207ENST00000440705 CASKIN1Q8WXD9 1431 aa31.38■■■□□ 2.61
VRK2-207ENST00000440705 FYCO1Q9BQS8 1478 aa31.37■■■□□ 2.61
VRK2-207ENST00000440705 TRIM26Q12899 539 aaPredicted RBP31.37■■■□□ 2.61
VRK2-207ENST00000440705 PCF11O94913 1555 aaKnown RBP31.36■■■□□ 2.61
VRK2-207ENST00000440705 MAP3K1Q13233 1512 aa31.32■■■□□ 2.6
VRK2-207ENST00000440705 CLASP1Q7Z460 1538 aa31.29■■■□□ 2.6
VRK2-207ENST00000440705 SHROOM2Q13796 1616 aa31.28■■■□□ 2.6
VRK2-207ENST00000440705 ATP1B4Q9UN42 357 aaPredicted RBP31.28■■■□□ 2.6
VRK2-207ENST00000440705 PRG4Q92954 1404 aaPredicted RBP31.26■■■□□ 2.59
VRK2-207ENST00000440705 TIAM1Q13009 1591 aa31.24■■■□□ 2.59
VRK2-207ENST00000440705 PCGF6Q9BYE7 350 aa31.23■■■□□ 2.59
VRK2-207ENST00000440705 TTBK1Q5TCY1 1321 aaPredicted RBP31.23■■■□□ 2.59
VRK2-207ENST00000440705 CFAP43Q8NDM7 1665 aa31.18■■■□□ 2.58
VRK2-207ENST00000440705 KANK4Q5T7N3 995 aaPredicted RBP31.18■■■□□ 2.58
VRK2-207ENST00000440705 HECW1Q76N89 1606 aa31.16■■■□□ 2.58
VRK2-207ENST00000440705 OSCARQ8IYS5 282 aa31.16■■■□□ 2.58
VRK2-207ENST00000440705 CCDC18Q5T9S5 1454 aa31.11■■■□□ 2.57
VRK2-207ENST00000440705 RAPGEF6Q8TEU7 1601 aa31.1■■■□□ 2.57
VRK2-207ENST00000440705 LRRC9Q6ZRR7 1453 aa31.1■■■□□ 2.57
VRK2-207ENST00000440705 LRRIQ1Q96JM4 1722 aa31.08■■■□□ 2.57
VRK2-207ENST00000440705 PTPRGP23470 1445 aa31.07■■■□□ 2.56
VRK2-207ENST00000440705 EPRSP07814 1512 aaKnown RBP31.04■■■□□ 2.56
VRK2-207ENST00000440705 PLB1Q6P1J6 1458 aa31.02■■■□□ 2.56
VRK2-207ENST00000440705 ERCC6L2Q5T890 1561 aa31.01■■■□□ 2.56
VRK2-207ENST00000440705 NUP153P49790 1475 aaKnown RBP31■■■□□ 2.55
VRK2-207ENST00000440705 ABCA8O94911 1581 aa30.99■■■□□ 2.55
VRK2-207ENST00000440705 MTUS2Q5JR59 1369 aa30.97■■■□□ 2.55
VRK2-207ENST00000440705 CDK13Q14004 1512 aaKnown RBP30.93■■■□□ 2.54
VRK2-207ENST00000440705 EHBP1L1Q8N3D4 1523 aa30.9■■■□□ 2.54
VRK2-207ENST00000440705 UACAQ9BZF9 1416 aa30.89■■■□□ 2.53
VRK2-207ENST00000440705 ARID3CA6NKF2 412 aa30.88■■■□□ 2.53
VRK2-207ENST00000440705 CDK11AQ9UQ88 783 aaPredicted RBP30.87■■■□□ 2.53
VRK2-207ENST00000440705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.85■■■□□ 2.53
VRK2-207ENST00000440705 HNRNPUL2Q1KMD3 747 aaKnown RBP30.85■■■□□ 2.53
VRK2-207ENST00000440705 MAGI3Q5TCQ9 1506 aa30.83■■■□□ 2.53
VRK2-207ENST00000440705 SUPT6HQ7KZ85 1726 aaKnown RBP30.81■■■□□ 2.52
VRK2-207ENST00000440705 RRBP1Q9P2E9 1410 aaKnown RBP30.8■■■□□ 2.52
VRK2-207ENST00000440705 ATP10BO94823 1461 aa30.79■■■□□ 2.52
VRK2-207ENST00000440705 ABCC2Q92887 1545 aa30.78■■■□□ 2.52
VRK2-207ENST00000440705 PHLDB1Q86UU1 1377 aa30.78■■■□□ 2.52
VRK2-207ENST00000440705 NCOA2Q15596 1464 aa30.75■■■□□ 2.51
VRK2-207ENST00000440705 UHRF1BP1LA0JNW5 1464 aa30.75■■■□□ 2.51
VRK2-207ENST00000440705 CCNB3Q8WWL7 1395 aa30.73■■■□□ 2.51
VRK2-207ENST00000440705 TROQ12816 1431 aaPredicted RBP30.71■■■□□ 2.51
VRK2-207ENST00000440705 ARHGEF11O15085 1522 aa30.71■■■□□ 2.51
VRK2-207ENST00000440705 PLEKHD1A6NEE1 506 aa30.7■■■□□ 2.5
VRK2-207ENST00000440705 MYOM3Q5VTT5 1437 aa30.64■■■□□ 2.5
VRK2-207ENST00000440705 ADCY10Q96PN6 1610 aa30.61■■■□□ 2.49
VRK2-207ENST00000440705 FGD6Q6ZV73 1430 aa30.61■■■□□ 2.49
VRK2-207ENST00000440705 KDM5BQ9UGL1 1544 aa30.6■■■□□ 2.49
VRK2-207ENST00000440705 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.58■■■□□ 2.49
VRK2-207ENST00000440705 ZCCHC11Q5TAX3 1644 aaKnown RBP30.56■■■□□ 2.48
VRK2-207ENST00000440705 FAM50AQ14320 339 aaKnown RBP30.54■■■□□ 2.48
VRK2-207ENST00000440705 KIF14Q15058 1648 aa30.53■■■□□ 2.48
VRK2-207ENST00000440705 MIA2Q96PC5 1412 aa30.52■■■□□ 2.48
VRK2-207ENST00000440705 PTPN23Q9H3S7 1636 aa30.47■■■□□ 2.47
VRK2-207ENST00000440705 ITSN2Q9NZM3 1697 aa30.44■■■□□ 2.46
VRK2-207ENST00000440705 TCOF1Q13428 1488 aaKnown RBP30.43■■■□□ 2.46
VRK2-207ENST00000440705 ABCC10Q5T3U5 1492 aa30.43■■■□□ 2.46
VRK2-207ENST00000440705 RIMBP3CA6NJZ7 1639 aa30.43■■■□□ 2.46
VRK2-207ENST00000440705 RIMBP3BA6NNM3 1639 aa30.43■■■□□ 2.46
VRK2-207ENST00000440705 RIMBP3Q9UFD9 1639 aa30.43■■■□□ 2.46
VRK2-207ENST00000440705 GPATCH8Q9UKJ3 1502 aaKnown RBP30.41■■■□□ 2.46
VRK2-207ENST00000440705 ITGAEP38570 1179 aa30.41■■■□□ 2.46
VRK2-207ENST00000440705 NPM1P06748 294 aaKnown RBP eCLIP30.4■■■□□ 2.46
VRK2-207ENST00000440705 CFDP1Q9UEE9 299 aaPredicted RBP30.36■■■□□ 2.45
VRK2-207ENST00000440705 CDC42BPAQ5VT25 1732 aa30.35■■■□□ 2.45
VRK2-207ENST00000440705 WDR7Q9Y4E6 1490 aa30.33■■■□□ 2.45
VRK2-207ENST00000440705 KCNH8Q96L42 1107 aa30.33■■■□□ 2.45
VRK2-207ENST00000440705 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.31■■■□□ 2.44
VRK2-207ENST00000440705 CYB5RLQ6IPT4 315 aa30.31■■■□□ 2.44
VRK2-207ENST00000440705 ASXL2Q76L83 1435 aa30.27■■■□□ 2.44
VRK2-207ENST00000440705 TTC37Q6PGP7 1564 aa30.26■■■□□ 2.43
VRK2-207ENST00000440705 PREX2Q70Z35 1606 aa30.24■■■□□ 2.43
VRK2-207ENST00000440705 CAMSAP2Q08AD1 1489 aa30.23■■■□□ 2.43
VRK2-207ENST00000440705 ZNF644Q9H582 1327 aaPredicted RBP30.23■■■□□ 2.43
VRK2-207ENST00000440705 ZNF777Q9ULD5 760 aaPredicted RBP30.22■■■□□ 2.43
VRK2-207ENST00000440705 MYO5CQ9NQX4 1742 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms