RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 CHMP7Q8WUX9 453 aaPredicted RBP44.45■■■■■ 4.71
CGREF1-207ENST00000440612 ARHGAP35Q9NRY4 1499 aa44.43■■■■■ 4.7
CGREF1-207ENST00000440612 ARAP1Q96P48 1450 aa44.35■■■■■ 4.69
CGREF1-207ENST00000440612 FBLN2P98095 1184 aa44.34■■■■■ 4.69
CGREF1-207ENST00000440612 NUP160Q12769 1436 aa44.33■■■■■ 4.69
CGREF1-207ENST00000440612 CEP170Q5SW79 1584 aa44.33■■■■■ 4.69
CGREF1-207ENST00000440612 KIAA0586Q9BVV6 1533 aa44.29■■■■■ 4.68
CGREF1-207ENST00000440612 IQGAP2Q13576 1575 aa44.29■■■■■ 4.68
CGREF1-207ENST00000440612 CHD1O14646 1710 aa44.22■■■■■ 4.67
CGREF1-207ENST00000440612 VPS8Q8N3P4 1428 aa44.22■■■■■ 4.67
CGREF1-207ENST00000440612 EFCAB5A4FU69 1503 aa44.22■■■■■ 4.67
CGREF1-207ENST00000440612 SAMD9Q5K651 1589 aa44.18■■■■■ 4.66
CGREF1-207ENST00000440612 UGGT2Q9NYU1 1516 aa44.13■■■■■ 4.65
CGREF1-207ENST00000440612 FHOD3Q2V2M9 1422 aa44.05■■■■■ 4.64
CGREF1-207ENST00000440612 P3H3Q8IVL6 736 aa44.05■■■■■ 4.64
CGREF1-207ENST00000440612 DISP1Q96F81 1524 aa43.96■■■■■ 4.63
CGREF1-207ENST00000440612 JPH4Q96JJ6 628 aa43.9■■■■■ 4.62
CGREF1-207ENST00000440612 KIAA0556O60303 1618 aa43.86■■■■■ 4.61
CGREF1-207ENST00000440612 CLASP1Q7Z460 1538 aa43.82■■■■■ 4.6
CGREF1-207ENST00000440612 FMN1Q68DA7 1419 aa43.79■■■■■ 4.6
CGREF1-207ENST00000440612 SHROOM2Q13796 1616 aa43.76■■■■■ 4.6
CGREF1-207ENST00000440612 PCF11O94913 1555 aaKnown RBP43.75■■■■■ 4.59
CGREF1-207ENST00000440612 PPARGC1BQ86YN6 1023 aaKnown RBP43.72■■■■■ 4.59
CGREF1-207ENST00000440612 CASKIN1Q8WXD9 1431 aa43.71■■■■■ 4.59
CGREF1-207ENST00000440612 CARMIL2Q6F5E8 1435 aa43.67■■■■■ 4.58
CGREF1-207ENST00000440612 FYCO1Q9BQS8 1478 aa43.66■■■■■ 4.58
CGREF1-207ENST00000440612 PRG4Q92954 1404 aaPredicted RBP43.66■■■■■ 4.58
CGREF1-207ENST00000440612 APLP2Q06481 763 aa43.56■■■■■ 4.56
CGREF1-207ENST00000440612 MAP3K1Q13233 1512 aa43.56■■■■■ 4.56
CGREF1-207ENST00000440612 OSCARQ8IYS5 282 aa43.5■■■■■ 4.55
CGREF1-207ENST00000440612 TIAM1Q13009 1591 aa43.5■■■■■ 4.55
CGREF1-207ENST00000440612 ERCC6L2Q5T890 1561 aa43.5■■■■■ 4.55
CGREF1-207ENST00000440612 KANK4Q5T7N3 995 aaPredicted RBP43.47■■■■■ 4.55
CGREF1-207ENST00000440612 LRRIQ1Q96JM4 1722 aa43.43■■■■■ 4.54
CGREF1-207ENST00000440612 CFAP43Q8NDM7 1665 aa43.42■■■■■ 4.54
CGREF1-207ENST00000440612 ATP1B4Q9UN42 357 aaPredicted RBP43.41■■■■■ 4.54
CGREF1-207ENST00000440612 TTBK1Q5TCY1 1321 aaPredicted RBP43.4■■■■■ 4.54
CGREF1-207ENST00000440612 HECW1Q76N89 1606 aa43.38■■■■■ 4.53
CGREF1-207ENST00000440612 TRIM26Q12899 539 aaPredicted RBP43.37■■■■■ 4.53
CGREF1-207ENST00000440612 PLB1Q6P1J6 1458 aa43.35■■■■■ 4.53
CGREF1-207ENST00000440612 RAPGEF6Q8TEU7 1601 aa43.35■■■■■ 4.53
CGREF1-207ENST00000440612 PTPRGP23470 1445 aa43.33■■■■■ 4.53
CGREF1-207ENST00000440612 NUP153P49790 1475 aaKnown RBP43.31■■■■■ 4.52
CGREF1-207ENST00000440612 LRRC9Q6ZRR7 1453 aa43.31■■■■■ 4.52
CGREF1-207ENST00000440612 ABCA8O94911 1581 aa43.29■■■■■ 4.52
CGREF1-207ENST00000440612 EPRSP07814 1512 aaKnown RBP43.29■■■■■ 4.52
CGREF1-207ENST00000440612 CCDC18Q5T9S5 1454 aa43.26■■■■■ 4.52
CGREF1-207ENST00000440612 PCGF6Q9BYE7 350 aa43.21■■■■■ 4.51
CGREF1-207ENST00000440612 CDK13Q14004 1512 aaKnown RBP43.19■■■■■ 4.51
CGREF1-207ENST00000440612 MAGI3Q5TCQ9 1506 aa43.12■■■■■ 4.49
CGREF1-207ENST00000440612 UACAQ9BZF9 1416 aa43.09■■■■■ 4.49
CGREF1-207ENST00000440612 ARID3CA6NKF2 412 aa43.08■■■■■ 4.49
CGREF1-207ENST00000440612 MTUS2Q5JR59 1369 aa43.02■■■■■ 4.48
CGREF1-207ENST00000440612 EHBP1L1Q8N3D4 1523 aa43■■■■■ 4.47
CGREF1-207ENST00000440612 ATP10BO94823 1461 aa43■■■■■ 4.47
CGREF1-207ENST00000440612 ABCC2Q92887 1545 aa42.98■■■■■ 4.47
CGREF1-207ENST00000440612 UHRF1BP1LA0JNW5 1464 aa42.94■■■■■ 4.46
CGREF1-207ENST00000440612 PHLDB1Q86UU1 1377 aa42.92■■■■■ 4.46
CGREF1-207ENST00000440612 ARHGEF11O15085 1522 aa42.87■■■■■ 4.45
CGREF1-207ENST00000440612 RRBP1Q9P2E9 1410 aaKnown RBP42.86■■■■■ 4.45
CGREF1-207ENST00000440612 NCOA2Q15596 1464 aa42.85■■■■■ 4.45
CGREF1-207ENST00000440612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP42.83■■■■■ 4.45
CGREF1-207ENST00000440612 HNRNPUL2Q1KMD3 747 aaKnown RBP42.83■■■■■ 4.45
CGREF1-207ENST00000440612 SUPT6HQ7KZ85 1726 aaKnown RBP42.83■■■■■ 4.45
CGREF1-207ENST00000440612 CDK11AQ9UQ88 783 aaPredicted RBP42.82■■■■■ 4.44
CGREF1-207ENST00000440612 TROQ12816 1431 aaPredicted RBP42.81■■■■■ 4.44
CGREF1-207ENST00000440612 ADCY10Q96PN6 1610 aa42.77■■■■■ 4.44
CGREF1-207ENST00000440612 KDM5BQ9UGL1 1544 aa42.77■■■■■ 4.44
CGREF1-207ENST00000440612 CCNB3Q8WWL7 1395 aa42.7■■■■■ 4.43
CGREF1-207ENST00000440612 ZCCHC11Q5TAX3 1644 aaKnown RBP42.67■■■■■ 4.42
CGREF1-207ENST00000440612 PLEKHD1A6NEE1 506 aa42.67■■■■■ 4.42
CGREF1-207ENST00000440612 MYOM3Q5VTT5 1437 aa42.64■■■■■ 4.42
CGREF1-207ENST00000440612 RIMBP3CA6NJZ7 1639 aa42.63■■■■■ 4.42
CGREF1-207ENST00000440612 RIMBP3BA6NNM3 1639 aa42.63■■■■■ 4.42
CGREF1-207ENST00000440612 RIMBP3Q9UFD9 1639 aa42.63■■■■■ 4.42
CGREF1-207ENST00000440612 KIF14Q15058 1648 aa42.63■■■■■ 4.41
CGREF1-207ENST00000440612 FGD6Q6ZV73 1430 aa42.61■■■■■ 4.41
CGREF1-207ENST00000440612 ABCC10Q5T3U5 1492 aa42.52■■■■■ 4.4
CGREF1-207ENST00000440612 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP42.49■■■■■ 4.39
CGREF1-207ENST00000440612 MIA2Q96PC5 1412 aa42.44■■■■■ 4.39
CGREF1-207ENST00000440612 GPATCH8Q9UKJ3 1502 aaKnown RBP42.44■■■■■ 4.38
CGREF1-207ENST00000440612 TCOF1Q13428 1488 aaKnown RBP42.4■■■■■ 4.38
CGREF1-207ENST00000440612 PTPN23Q9H3S7 1636 aa42.39■■■■■ 4.38
CGREF1-207ENST00000440612 FAM50AQ14320 339 aaKnown RBP42.38■■■■■ 4.38
CGREF1-207ENST00000440612 CYB5RLQ6IPT4 315 aa42.38■■■■■ 4.37
CGREF1-207ENST00000440612 WDR7Q9Y4E6 1490 aa42.33■■■■■ 4.37
CGREF1-207ENST00000440612 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP42.33■■■■■ 4.37
CGREF1-207ENST00000440612 CDC42BPAQ5VT25 1732 aa42.31■■■■■ 4.36
CGREF1-207ENST00000440612 ITSN2Q9NZM3 1697 aa42.31■■■■■ 4.36
CGREF1-207ENST00000440612 ASXL2Q76L83 1435 aa42.3■■■■■ 4.36
CGREF1-207ENST00000440612 TTC37Q6PGP7 1564 aa42.29■■■■■ 4.36
CGREF1-207ENST00000440612 KCNH8Q96L42 1107 aa42.25■■■■■ 4.35
CGREF1-207ENST00000440612 NPM1P06748 294 aaKnown RBP eCLIP42.25■■■■■ 4.35
CGREF1-207ENST00000440612 ITGAEP38570 1179 aa42.22■■■■■ 4.35
CGREF1-207ENST00000440612 CFDP1Q9UEE9 299 aaPredicted RBP42.22■■■■■ 4.35
CGREF1-207ENST00000440612 ZNF644Q9H582 1327 aaPredicted RBP42.2■■■■■ 4.35
CGREF1-207ENST00000440612 PTPRKQ15262 1439 aa42.18■■■■■ 4.34
CGREF1-207ENST00000440612 PREX2Q70Z35 1606 aa42.18■■■■■ 4.34
CGREF1-207ENST00000440612 CAMSAP2Q08AD1 1489 aa42.14■■■■■ 4.34
CGREF1-207ENST00000440612 CDC42BPBQ9Y5S2 1711 aa42.14■■■■■ 4.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms