RNA–Protein interactions for RNA: ENST00000440111.6

TSC1-203, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,463 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-203ENST00000440111 MAP3K1Q13233 1512 aa10.07□□□□□ -0.8
TSC1-203ENST00000440111 L1TD1Q5T7N2 865 aaKnown RBP10.07□□□□□ -0.8
TSC1-203ENST00000440111 CFTRP13569 1480 aa10.06□□□□□ -0.8
TSC1-203ENST00000440111 ANP32EQ9BTT0 268 aa10.06□□□□□ -0.8
TSC1-203ENST00000440111 GTF3C3Q9Y5Q9 886 aa10.06□□□□□ -0.8
TSC1-203ENST00000440111 TOP2BQ02880 1626 aa10.05□□□□□ -0.8
TSC1-203ENST00000440111 CARMIL1Q5VZK9 1371 aa10.05□□□□□ -0.8
TSC1-203ENST00000440111 ZRSR1Q15695 479 aaKnown RBP10.04□□□□□ -0.8
TSC1-203ENST00000440111 ANP32CO43423 234 aa10.04□□□□□ -0.8
TSC1-203ENST00000440111 PDS5BQ9NTI5 1447 aa10.03□□□□□ -0.8
TSC1-203ENST00000440111 PRXQ9BXM0 1461 aa10.03□□□□□ -0.8
TSC1-203ENST00000440111 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.03□□□□□ -0.8
TSC1-203ENST00000440111 TONSLQ96HA7 1378 aa10.02□□□□□ -0.8
TSC1-203ENST00000440111 EFCAB5A4FU69 1503 aa10.02□□□□□ -0.81
TSC1-203ENST00000440111 CUX2O14529 1486 aa10.02□□□□□ -0.81
TSC1-203ENST00000440111 ZNF326Q5BKZ1 582 aaKnown RBP10.02□□□□□ -0.81
TSC1-203ENST00000440111 MTUS2Q5JR59 1369 aa10.01□□□□□ -0.81
TSC1-203ENST00000440111 FAM50AQ14320 339 aaKnown RBP9.99□□□□□ -0.81
TSC1-203ENST00000440111 ARHGAP35Q9NRY4 1499 aa9.99□□□□□ -0.81
TSC1-203ENST00000440111 SETD5Q9C0A6 1442 aa9.99□□□□□ -0.81
TSC1-203ENST00000440111 RRBP1Q9P2E9 1410 aaKnown RBP9.98□□□□□ -0.81
TSC1-203ENST00000440111 NCLP19338 710 aaKnown RBP9.98□□□□□ -0.81
TSC1-203ENST00000440111 GOLGA6L6A8MZA4 724 aa9.98□□□□□ -0.81
TSC1-203ENST00000440111 NRDCO43847 1150 aa9.97□□□□□ -0.81
TSC1-203ENST00000440111 ERICH6BQ5W0A0 696 aa9.97□□□□□ -0.81
TSC1-203ENST00000440111 CCER2I3L3R5 266 aa9.96□□□□□ -0.81
TSC1-203ENST00000440111 MYH16Q9H6N6 1097 aa9.96□□□□□ -0.82
TSC1-203ENST00000440111 CUX1P39880 1505 aa9.95□□□□□ -0.82
TSC1-203ENST00000440111 BICRAQ9NZM4 1560 aa9.95□□□□□ -0.82
TSC1-203ENST00000440111 AQRO60306 1485 aaKnown RBP eCLIP9.95□□□□□ -0.822e-7■■□□□ 12.6
TSC1-203ENST00000440111 ITGAEP38570 1179 aa9.92□□□□□ -0.82
TSC1-203ENST00000440111 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.92□□□□□ -0.82
TSC1-203ENST00000440111 BIVM-ERCC5R4GMW8 1640 aa9.92□□□□□ -0.82
TSC1-203ENST00000440111 USP35Q9P2H5 1018 aa9.91□□□□□ -0.82
TSC1-203ENST00000440111 FYCO1Q9BQS8 1478 aa9.91□□□□□ -0.82
TSC1-203ENST00000440111 SYNJ1O43426 1573 aa9.91□□□□□ -0.82
TSC1-203ENST00000440111 GOLGA6L22H0YM25 854 aa9.91□□□□□ -0.82
TSC1-203ENST00000440111 NBR1Q14596 966 aa9.91□□□□□ -0.82
TSC1-203ENST00000440111 CCDC18Q5T9S5 1454 aa9.91□□□□□ -0.82
TSC1-203ENST00000440111 KRI1Q8N9T8 703 aaKnown RBP9.9□□□□□ -0.82
TSC1-203ENST00000440111 BCL11AQ9H165 835 aa9.9□□□□□ -0.82
TSC1-203ENST00000440111 CASKIN1Q8WXD9 1431 aa9.9□□□□□ -0.82
TSC1-203ENST00000440111 CALRP27797 417 aaKnown RBP9.88□□□□□ -0.83
TSC1-203ENST00000440111 ARXQ96QS3 562 aa9.88□□□□□ -0.83
TSC1-203ENST00000440111 IGF1RP08069 1367 aa9.88□□□□□ -0.83
TSC1-203ENST00000440111 DHX57Q6P158 1386 aaKnown RBP9.88□□□□□ -0.83
TSC1-203ENST00000440111 TRIM52Q96A61 297 aa9.87□□□□□ -0.83
TSC1-203ENST00000440111 FANCD2Q9BXW9 1451 aa9.86□□□□□ -0.83
TSC1-203ENST00000440111 STAG3Q9UJ98 1225 aa9.86□□□□□ -0.83
TSC1-203ENST00000440111 CHAF1AQ13111 956 aaPredicted RBP9.85□□□□□ -0.83
TSC1-203ENST00000440111 NEUROD1Q13562 356 aa9.85□□□□□ -0.83
TSC1-203ENST00000440111 KIAA2012Q0VF49 1180 aa9.84□□□□□ -0.83
TSC1-203ENST00000440111 ABCA10Q8WWZ4 1543 aa9.84□□□□□ -0.83
TSC1-203ENST00000440111 THOC2Q8NI27 1593 aaKnown RBP9.84□□□□□ -0.83
TSC1-203ENST00000440111 CASC1Q6TDU7 716 aa9.84□□□□□ -0.83
TSC1-203ENST00000440111 FGD5Q6ZNL6 1462 aa9.83□□□□□ -0.84
TSC1-203ENST00000440111 SCAF1Q9H7N4 1312 aaKnown RBP9.83□□□□□ -0.84
TSC1-203ENST00000440111 DNMBPQ6XZF7 1577 aa9.83□□□□□ -0.84
TSC1-203ENST00000440111 ARID4BQ4LE39 1312 aaPredicted RBP9.83□□□□□ -0.84
TSC1-203ENST00000440111 CARMIL2Q6F5E8 1435 aa9.82□□□□□ -0.84
TSC1-203ENST00000440111 AKNAQ7Z591 1439 aa9.82□□□□□ -0.84
TSC1-203ENST00000440111 NAP1L5Q96NT1 182 aaPredicted RBP9.81□□□□□ -0.84
TSC1-203ENST00000440111 EIF4G2P78344 907 aaKnown RBP eCLIP9.81□□□□□ -0.84
TSC1-203ENST00000440111 LRRC9Q6ZRR7 1453 aa9.81□□□□□ -0.84
TSC1-203ENST00000440111 BECN1Q14457 450 aa9.81□□□□□ -0.84
TSC1-203ENST00000440111 ROCK2O75116 1388 aaKnown RBP9.81□□□□□ -0.84
TSC1-203ENST00000440111 MIA2Q96PC5 1412 aa9.81□□□□□ -0.84
TSC1-203ENST00000440111 RAB3GAP2Q9H2M9 1393 aa9.81□□□□□ -0.84
TSC1-203ENST00000440111 ARAP1Q96P48 1450 aa9.81□□□□□ -0.84
TSC1-203ENST00000440111 PRM3Q9NNZ6 103 aa9.8□□□□□ -0.84
TSC1-203ENST00000440111 CC2D2AQ9P2K1 1620 aa9.8□□□□□ -0.84
TSC1-203ENST00000440111 CUL7Q14999 1698 aa9.8□□□□□ -0.84
TSC1-203ENST00000440111 RSPH4AQ5TD94 716 aa9.8□□□□□ -0.84
TSC1-203ENST00000440111 RTN4Q9NQC3 1192 aaKnown RBP9.8□□□□□ -0.84
TSC1-203ENST00000440111 RUSC2Q8N2Y8 1516 aa9.79□□□□□ -0.84
TSC1-203ENST00000440111 MYOM3Q5VTT5 1437 aa9.79□□□□□ -0.84
TSC1-203ENST00000440111 TIAM1Q13009 1591 aa9.79□□□□□ -0.84
TSC1-203ENST00000440111 EHBP1L1Q8N3D4 1523 aa9.78□□□□□ -0.84
TSC1-203ENST00000440111 MIER1Q8N108 512 aa9.78□□□□□ -0.84
TSC1-203ENST00000440111 UACAQ9BZF9 1416 aa9.78□□□□□ -0.84
TSC1-203ENST00000440111 FGD6Q6ZV73 1430 aa9.77□□□□□ -0.85
TSC1-203ENST00000440111 TNNT3P45378 269 aaPredicted RBP9.76□□□□□ -0.85
TSC1-203ENST00000440111 LAMC3Q9Y6N6 1575 aa9.76□□□□□ -0.85
TSC1-203ENST00000440111 GOLGA2Q08379 1002 aa9.75□□□□□ -0.85
TSC1-203ENST00000440111 TSPY4P0CV99 314 aa9.75□□□□□ -0.85
TSC1-203ENST00000440111 TSPY10P0CW01 314 aa9.75□□□□□ -0.85
TSC1-203ENST00000440111 HFM1A2PYH4 1435 aa9.75□□□□□ -0.85
TSC1-203ENST00000440111 PTMAP06454 111 aaKnown RBP9.75□□□□□ -0.85
TSC1-203ENST00000440111 NPHP1O15259 732 aa9.74□□□□□ -0.85
TSC1-203ENST00000440111 KTN1Q86UP2 1357 aaKnown RBP9.74□□□□□ -0.85
TSC1-203ENST00000440111 CDCA8Q53HL2 280 aa9.74□□□□□ -0.85
TSC1-203ENST00000440111 STAC3Q96MF2 364 aa9.74□□□□□ -0.85
TSC1-203ENST00000440111 DNTTIP2Q5QJE6 756 aaKnown RBP9.74□□□□□ -0.85
TSC1-203ENST00000440111 PPP1R15AO75807 674 aaPredicted RBP9.73□□□□□ -0.85
TSC1-203ENST00000440111 NOC3LQ8WTT2 800 aaKnown RBP9.73□□□□□ -0.85
TSC1-203ENST00000440111 PTMSP20962 102 aa9.73□□□□□ -0.85
TSC1-203ENST00000440111 GAPVD1Q14C86 1478 aa9.72□□□□□ -0.85
TSC1-203ENST00000440111 PLEKHD1A6NEE1 506 aa9.72□□□□□ -0.85
TSC1-203ENST00000440111 CLSTN1O94985 981 aa9.72□□□□□ -0.85
TSC1-203ENST00000440111 CHMP4BQ9H444 224 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms