RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 RANGAP1P46060 587 aaPredicted RBP16.11■□□□□ 0.17
CBX5-202ENST00000439541 CHD1O14646 1710 aa16.11■□□□□ 0.17
CBX5-202ENST00000439541 CHMP7Q8WUX9 453 aaPredicted RBP16.09■□□□□ 0.17
CBX5-202ENST00000439541 CEP170Q5SW79 1584 aa16.08■□□□□ 0.17
CBX5-202ENST00000439541 CLIP1P30622 1438 aa16.04■□□□□ 0.16
CBX5-202ENST00000439541 NUP160Q12769 1436 aa16.03■□□□□ 0.16
CBX5-202ENST00000439541 IQGAP2Q13576 1575 aa16.02■□□□□ 0.15
CBX5-202ENST00000439541 KIAA0586Q9BVV6 1533 aa15.98■□□□□ 0.15
CBX5-202ENST00000439541 ARHGAP35Q9NRY4 1499 aa15.98■□□□□ 0.15
CBX5-202ENST00000439541 ARAP1Q96P48 1450 aa15.96■□□□□ 0.15
CBX5-202ENST00000439541 SAMD9Q5K651 1589 aa15.93■□□□□ 0.14
CBX5-202ENST00000439541 EFCAB5A4FU69 1503 aa15.92■□□□□ 0.14
CBX5-202ENST00000439541 UGGT2Q9NYU1 1516 aa15.92■□□□□ 0.14
CBX5-202ENST00000439541 FHOD3Q2V2M9 1422 aa15.91■□□□□ 0.14
CBX5-202ENST00000439541 P3H3Q8IVL6 736 aa15.91■□□□□ 0.14
CBX5-202ENST00000439541 CLASP1Q7Z460 1538 aa15.91■□□□□ 0.14
CBX5-202ENST00000439541 DISP1Q96F81 1524 aa15.88■□□□□ 0.13
CBX5-202ENST00000439541 KIAA0556O60303 1618 aa15.88■□□□□ 0.13
CBX5-202ENST00000439541 VPS8Q8N3P4 1428 aa15.86■□□□□ 0.13
CBX5-202ENST00000439541 SHROOM2Q13796 1616 aa15.85■□□□□ 0.13
CBX5-202ENST00000439541 JPH4Q96JJ6 628 aa15.84■□□□□ 0.13
CBX5-202ENST00000439541 ERCC6L2Q5T890 1561 aa15.82■□□□□ 0.12
CBX5-202ENST00000439541 PRG4Q92954 1404 aaPredicted RBP15.81■□□□□ 0.12
CBX5-202ENST00000439541 PCF11O94913 1555 aaKnown RBP15.81■□□□□ 0.12
CBX5-202ENST00000439541 TTBK1Q5TCY1 1321 aaPredicted RBP15.79■□□□□ 0.12
CBX5-202ENST00000439541 OSCARQ8IYS5 282 aa15.78■□□□□ 0.12
CBX5-202ENST00000439541 CARMIL2Q6F5E8 1435 aa15.77■□□□□ 0.12
CBX5-202ENST00000439541 FMN1Q68DA7 1419 aa15.75■□□□□ 0.11
CBX5-202ENST00000439541 PPARGC1BQ86YN6 1023 aaKnown RBP15.72■□□□□ 0.11
CBX5-202ENST00000439541 FYCO1Q9BQS8 1478 aa15.71■□□□□ 0.11
CBX5-202ENST00000439541 CASKIN1Q8WXD9 1431 aa15.71■□□□□ 0.11
CBX5-202ENST00000439541 PLB1Q6P1J6 1458 aa15.7■□□□□ 0.1
CBX5-202ENST00000439541 LRRIQ1Q96JM4 1722 aa15.69■□□□□ 0.1
CBX5-202ENST00000439541 ATP1B4Q9UN42 357 aaPredicted RBP15.68■□□□□ 0.1
CBX5-202ENST00000439541 RAPGEF6Q8TEU7 1601 aa15.67■□□□□ 0.1
CBX5-202ENST00000439541 HECW1Q76N89 1606 aa15.67■□□□□ 0.1
CBX5-202ENST00000439541 PTPRGP23470 1445 aa15.66■□□□□ 0.1
CBX5-202ENST00000439541 CFAP43Q8NDM7 1665 aa15.66■□□□□ 0.1
CBX5-202ENST00000439541 ARID3CA6NKF2 412 aa15.65■□□□□ 0.1
CBX5-202ENST00000439541 TIAM1Q13009 1591 aa15.65■□□□□ 0.1
CBX5-202ENST00000439541 ABCA8O94911 1581 aa15.64■□□□□ 0.09
CBX5-202ENST00000439541 NUP153P49790 1475 aaKnown RBP15.64■□□□□ 0.09
CBX5-202ENST00000439541 CDK13Q14004 1512 aaKnown RBP15.63■□□□□ 0.09
CBX5-202ENST00000439541 ARHGEF11O15085 1522 aa15.62■□□□□ 0.09
CBX5-202ENST00000439541 APLP2Q06481 763 aa15.61■□□□□ 0.09
CBX5-202ENST00000439541 EPRSP07814 1512 aaKnown RBP15.61■□□□□ 0.09
CBX5-202ENST00000439541 KANK4Q5T7N3 995 aaPredicted RBP15.59■□□□□ 0.09
CBX5-202ENST00000439541 UACAQ9BZF9 1416 aa15.58■□□□□ 0.08
CBX5-202ENST00000439541 CCDC18Q5T9S5 1454 aa15.57■□□□□ 0.08
CBX5-202ENST00000439541 RIMBP3CA6NJZ7 1639 aa15.57■□□□□ 0.08
CBX5-202ENST00000439541 RIMBP3BA6NNM3 1639 aa15.57■□□□□ 0.08
CBX5-202ENST00000439541 RIMBP3Q9UFD9 1639 aa15.57■□□□□ 0.08
CBX5-202ENST00000439541 MAP3K1Q13233 1512 aa15.57■□□□□ 0.08
CBX5-202ENST00000439541 MAGI3Q5TCQ9 1506 aa15.57■□□□□ 0.08
CBX5-202ENST00000439541 ABCC2Q92887 1545 aa15.57■□□□□ 0.08
CBX5-202ENST00000439541 LRRC9Q6ZRR7 1453 aa15.56■□□□□ 0.08
CBX5-202ENST00000439541 ADCY10Q96PN6 1610 aa15.54■□□□□ 0.08
CBX5-202ENST00000439541 ATP10BO94823 1461 aa15.51■□□□□ 0.07
CBX5-202ENST00000439541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
CBX5-202ENST00000439541 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
CBX5-202ENST00000439541 EHBP1L1Q8N3D4 1523 aa15.5■□□□□ 0.07
CBX5-202ENST00000439541 UHRF1BP1LA0JNW5 1464 aa15.5■□□□□ 0.07
CBX5-202ENST00000439541 MTUS2Q5JR59 1369 aa15.5■□□□□ 0.07
CBX5-202ENST00000439541 ZCCHC11Q5TAX3 1644 aaKnown RBP15.49■□□□□ 0.07
CBX5-202ENST00000439541 KDM5BQ9UGL1 1544 aa15.46■□□□□ 0.06
CBX5-202ENST00000439541 KIF14Q15058 1648 aa15.44■□□□□ 0.06
CBX5-202ENST00000439541 SUPT6HQ7KZ85 1726 aaKnown RBP15.43■□□□□ 0.06
CBX5-202ENST00000439541 TROQ12816 1431 aaPredicted RBP15.43■□□□□ 0.06
CBX5-202ENST00000439541 CYB5RLQ6IPT4 315 aa15.43■□□□□ 0.06
CBX5-202ENST00000439541 PHLDB1Q86UU1 1377 aa15.42■□□□□ 0.06
CBX5-202ENST00000439541 NCOA2Q15596 1464 aa15.42■□□□□ 0.06
CBX5-202ENST00000439541 HRCP23327 699 aa15.4■□□□□ 0.06
CBX5-202ENST00000439541 CDK11AQ9UQ88 783 aaPredicted RBP15.38■□□□□ 0.05
CBX5-202ENST00000439541 TRIM26Q12899 539 aaPredicted RBP15.38■□□□□ 0.05
CBX5-202ENST00000439541 PLEKHD1A6NEE1 506 aa15.36■□□□□ 0.05
CBX5-202ENST00000439541 PCGF6Q9BYE7 350 aa15.36■□□□□ 0.05
CBX5-202ENST00000439541 WDR7Q9Y4E6 1490 aa15.34■□□□□ 0.05
CBX5-202ENST00000439541 ASXL2Q76L83 1435 aa15.33■□□□□ 0.05
CBX5-202ENST00000439541 TTC37Q6PGP7 1564 aa15.33■□□□□ 0.05
CBX5-202ENST00000439541 MYOM3Q5VTT5 1437 aa15.33■□□□□ 0.04
CBX5-202ENST00000439541 RRBP1Q9P2E9 1410 aaKnown RBP15.33■□□□□ 0.04
CBX5-202ENST00000439541 ABCC10Q5T3U5 1492 aa15.33■□□□□ 0.04
CBX5-202ENST00000439541 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.31■□□□□ 0.04
CBX5-202ENST00000439541 FGD6Q6ZV73 1430 aa15.31■□□□□ 0.04
CBX5-202ENST00000439541 CCNB3Q8WWL7 1395 aa15.3■□□□□ 0.04
CBX5-202ENST00000439541 KCNH8Q96L42 1107 aa15.3■□□□□ 0.04
CBX5-202ENST00000439541 NPM1P06748 294 aaKnown RBP eCLIP15.29■□□□□ 0.04
CBX5-202ENST00000439541 CDC42BPAQ5VT25 1732 aa15.28■□□□□ 0.04
CBX5-202ENST00000439541 ITSN2Q9NZM3 1697 aa15.28■□□□□ 0.04
CBX5-202ENST00000439541 GPATCH8Q9UKJ3 1502 aaKnown RBP15.27■□□□□ 0.04
CBX5-202ENST00000439541 MAPKBP1O60336 1514 aa15.27■□□□□ 0.03
CBX5-202ENST00000439541 PTPN23Q9H3S7 1636 aa15.27■□□□□ 0.03
CBX5-202ENST00000439541 PREX2Q70Z35 1606 aa15.26■□□□□ 0.03
CBX5-202ENST00000439541 FAM50AQ14320 339 aaKnown RBP15.25■□□□□ 0.03
CBX5-202ENST00000439541 DNAJC5Q9H3Z4 198 aa15.24■□□□□ 0.03
CBX5-202ENST00000439541 MYO5CQ9NQX4 1742 aa15.23■□□□□ 0.03
CBX5-202ENST00000439541 ABCA9Q8IUA7 1624 aa15.23■□□□□ 0.03
CBX5-202ENST00000439541 CDC42BPBQ9Y5S2 1711 aa15.22■□□□□ 0.03
CBX5-202ENST00000439541 MIA2Q96PC5 1412 aa15.22■□□□□ 0.03
CBX5-202ENST00000439541 TCOF1Q13428 1488 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms