RNA–Protein interactions for RNA: ENST00000439482.5

TTC39A-211, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 5

Gene TTC39A, Length 978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-211ENST00000439482 ARHGAP35Q9NRY4 1499 aa17.69■□□□□ 0.42
TTC39A-211ENST00000439482 APLP2Q06481 763 aa17.69■□□□□ 0.42
TTC39A-211ENST00000439482 EFCAB5A4FU69 1503 aa17.67■□□□□ 0.42
TTC39A-211ENST00000439482 SYNJ2O15056 1496 aa17.67■□□□□ 0.42
TTC39A-211ENST00000439482 ARAP1Q96P48 1450 aa17.67■□□□□ 0.42
TTC39A-211ENST00000439482 CHMP7Q8WUX9 453 aaPredicted RBP17.66■□□□□ 0.42
TTC39A-211ENST00000439482 OSCARQ8IYS5 282 aa17.65■□□□□ 0.42
TTC39A-211ENST00000439482 GRIN2AQ12879 1464 aa17.63■□□□□ 0.41
TTC39A-211ENST00000439482 KIAA0586Q9BVV6 1533 aa17.61■□□□□ 0.41
TTC39A-211ENST00000439482 PCGF6Q9BYE7 350 aa17.6■□□□□ 0.41
TTC39A-211ENST00000439482 CTTNBP2Q8WZ74 1663 aa17.59■□□□□ 0.41
TTC39A-211ENST00000439482 FMN1Q68DA7 1419 aa17.56■□□□□ 0.4
TTC39A-211ENST00000439482 RIMBP3CA6NJZ7 1639 aa17.54■□□□□ 0.4
TTC39A-211ENST00000439482 RIMBP3BA6NNM3 1639 aa17.54■□□□□ 0.4
TTC39A-211ENST00000439482 RIMBP3Q9UFD9 1639 aa17.54■□□□□ 0.4
TTC39A-211ENST00000439482 IQGAP2Q13576 1575 aa17.54■□□□□ 0.4
TTC39A-211ENST00000439482 FBLN2P98095 1184 aa17.54■□□□□ 0.4
TTC39A-211ENST00000439482 NUP160Q12769 1436 aa17.54■□□□□ 0.4
TTC39A-211ENST00000439482 UGGT2Q9NYU1 1516 aa17.52■□□□□ 0.4
TTC39A-211ENST00000439482 MAP3K1Q13233 1512 aa17.52■□□□□ 0.39
TTC39A-211ENST00000439482 SAMD9Q5K651 1589 aa17.51■□□□□ 0.39
TTC39A-211ENST00000439482 P3H3Q8IVL6 736 aa17.51■□□□□ 0.39
TTC39A-211ENST00000439482 FHOD3Q2V2M9 1422 aa17.5■□□□□ 0.39
TTC39A-211ENST00000439482 CASKIN1Q8WXD9 1431 aa17.49■□□□□ 0.39
TTC39A-211ENST00000439482 PPARGC1BQ86YN6 1023 aaKnown RBP17.49■□□□□ 0.39
TTC39A-211ENST00000439482 FYCO1Q9BQS8 1478 aa17.47■□□□□ 0.39
TTC39A-211ENST00000439482 JPH4Q96JJ6 628 aa17.44■□□□□ 0.38
TTC39A-211ENST00000439482 CARMIL2Q6F5E8 1435 aa17.43■□□□□ 0.38
TTC39A-211ENST00000439482 CEP170Q5SW79 1584 aa17.42■□□□□ 0.38
TTC39A-211ENST00000439482 ARHGEF11O15085 1522 aa17.41■□□□□ 0.38
TTC39A-211ENST00000439482 DISP1Q96F81 1524 aa17.38■□□□□ 0.37
TTC39A-211ENST00000439482 ATP1B4Q9UN42 357 aaPredicted RBP17.37■□□□□ 0.37
TTC39A-211ENST00000439482 TIAM1Q13009 1591 aa17.36■□□□□ 0.37
TTC39A-211ENST00000439482 KANK4Q5T7N3 995 aaPredicted RBP17.36■□□□□ 0.37
TTC39A-211ENST00000439482 PCF11O94913 1555 aaKnown RBP17.36■□□□□ 0.37
TTC39A-211ENST00000439482 TTBK1Q5TCY1 1321 aaPredicted RBP17.35■□□□□ 0.37
TTC39A-211ENST00000439482 KIAA0556O60303 1618 aa17.35■□□□□ 0.37
TTC39A-211ENST00000439482 LRRC9Q6ZRR7 1453 aa17.33■□□□□ 0.37
TTC39A-211ENST00000439482 TRHP20396 242 aaPredicted RBP17.33■□□□□ 0.36
TTC39A-211ENST00000439482 CCDC18Q5T9S5 1454 aa17.32■□□□□ 0.36
TTC39A-211ENST00000439482 CHD1O14646 1710 aa17.32■□□□□ 0.36
TTC39A-211ENST00000439482 CYB5RLQ6IPT4 315 aa17.3■□□□□ 0.36
TTC39A-211ENST00000439482 PRG4Q92954 1404 aaPredicted RBP17.28■□□□□ 0.36
TTC39A-211ENST00000439482 HECW1Q76N89 1606 aa17.27■□□□□ 0.36
TTC39A-211ENST00000439482 MTUS2Q5JR59 1369 aa17.26■□□□□ 0.35
TTC39A-211ENST00000439482 CFAP43Q8NDM7 1665 aa17.26■□□□□ 0.35
TTC39A-211ENST00000439482 CDK11AQ9UQ88 783 aaPredicted RBP17.25■□□□□ 0.35
TTC39A-211ENST00000439482 RRBP1Q9P2E9 1410 aaKnown RBP17.24■□□□□ 0.35
TTC39A-211ENST00000439482 EPRSP07814 1512 aaKnown RBP17.23■□□□□ 0.35
TTC39A-211ENST00000439482 PTPRGP23470 1445 aa17.22■□□□□ 0.35
TTC39A-211ENST00000439482 CCNB3Q8WWL7 1395 aa17.2■□□□□ 0.34
TTC39A-211ENST00000439482 SHROOM2Q13796 1616 aa17.2■□□□□ 0.34
TTC39A-211ENST00000439482 CLASP1Q7Z460 1538 aa17.2■□□□□ 0.34
TTC39A-211ENST00000439482 EHBP1L1Q8N3D4 1523 aa17.18■□□□□ 0.34
TTC39A-211ENST00000439482 NUP153P49790 1475 aaKnown RBP17.18■□□□□ 0.34
TTC39A-211ENST00000439482 RAPGEF6Q8TEU7 1601 aa17.18■□□□□ 0.34
TTC39A-211ENST00000439482 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.16■□□□□ 0.34
TTC39A-211ENST00000439482 AEBP2Q6ZN18 517 aaPredicted RBP17.15■□□□□ 0.34
TTC39A-211ENST00000439482 PHLDB1Q86UU1 1377 aa17.15■□□□□ 0.34
TTC39A-211ENST00000439482 PLB1Q6P1J6 1458 aa17.14■□□□□ 0.33
TTC39A-211ENST00000439482 HRCP23327 699 aa17.14■□□□□ 0.33
TTC39A-211ENST00000439482 ABCA8O94911 1581 aa17.13■□□□□ 0.33
TTC39A-211ENST00000439482 ZEB1P37275 1124 aaPredicted RBP17.12■□□□□ 0.33
TTC39A-211ENST00000439482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.11■□□□□ 0.33
TTC39A-211ENST00000439482 HNRNPUL2Q1KMD3 747 aaKnown RBP17.11■□□□□ 0.33
TTC39A-211ENST00000439482 UACAQ9BZF9 1416 aa17.11■□□□□ 0.33
TTC39A-211ENST00000439482 NCOA2Q15596 1464 aa17.11■□□□□ 0.33
TTC39A-211ENST00000439482 CDK13Q14004 1512 aaKnown RBP17.09■□□□□ 0.33
TTC39A-211ENST00000439482 TROQ12816 1431 aaPredicted RBP17.08■□□□□ 0.32
TTC39A-211ENST00000439482 MYOM3Q5VTT5 1437 aa17.08■□□□□ 0.32
TTC39A-211ENST00000439482 PLEKHD1A6NEE1 506 aa17.08■□□□□ 0.32
TTC39A-211ENST00000439482 FGD6Q6ZV73 1430 aa17.07■□□□□ 0.32
TTC39A-211ENST00000439482 SUPT6HQ7KZ85 1726 aaKnown RBP17.07■□□□□ 0.32
TTC39A-211ENST00000439482 MAGI3Q5TCQ9 1506 aa17.05■□□□□ 0.32
TTC39A-211ENST00000439482 ATP10BO94823 1461 aa17.05■□□□□ 0.32
TTC39A-211ENST00000439482 MIA2Q96PC5 1412 aa17.04■□□□□ 0.32
TTC39A-211ENST00000439482 ARID3CA6NKF2 412 aa17.04■□□□□ 0.32
TTC39A-211ENST00000439482 FAM50AQ14320 339 aaKnown RBP17.04■□□□□ 0.32
TTC39A-211ENST00000439482 UHRF1BP1LA0JNW5 1464 aa17.04■□□□□ 0.32
TTC39A-211ENST00000439482 LRRIQ1Q96JM4 1722 aa17.04■□□□□ 0.32
TTC39A-211ENST00000439482 ABCC2Q92887 1545 aa17.01■□□□□ 0.31
TTC39A-211ENST00000439482 CCER1Q8TC90 406 aaPredicted RBP16.99■□□□□ 0.31
TTC39A-211ENST00000439482 ERCC6L2Q5T890 1561 aa16.98■□□□□ 0.31
TTC39A-211ENST00000439482 TCOF1Q13428 1488 aaKnown RBP16.97■□□□□ 0.31
TTC39A-211ENST00000439482 ITGAEP38570 1179 aa16.93■□□□□ 0.3
TTC39A-211ENST00000439482 KDM5BQ9UGL1 1544 aa16.92■□□□□ 0.3
TTC39A-211ENST00000439482 ADCY10Q96PN6 1610 aa16.92■□□□□ 0.3
TTC39A-211ENST00000439482 CFDP1Q9UEE9 299 aaPredicted RBP16.91■□□□□ 0.3
TTC39A-211ENST00000439482 SETD5Q9C0A6 1442 aa16.9■□□□□ 0.3
TTC39A-211ENST00000439482 CLSPNQ9HAW4 1339 aa16.9■□□□□ 0.3
TTC39A-211ENST00000439482 ACIN1Q9UKV3 1341 aaKnown RBP16.9■□□□□ 0.3
TTC39A-211ENST00000439482 GPATCH8Q9UKJ3 1502 aaKnown RBP16.89■□□□□ 0.29
TTC39A-211ENST00000439482 KIF14Q15058 1648 aa16.88■□□□□ 0.29
TTC39A-211ENST00000439482 PTPN23Q9H3S7 1636 aa16.88■□□□□ 0.29
TTC39A-211ENST00000439482 ABCC10Q5T3U5 1492 aa16.87■□□□□ 0.29
TTC39A-211ENST00000439482 NPM1P06748 294 aaKnown RBP eCLIP16.85■□□□□ 0.29
TTC39A-211ENST00000439482 AKNAQ7Z591 1439 aa16.84■□□□□ 0.29
TTC39A-211ENST00000439482 HFM1A2PYH4 1435 aa16.83■□□□□ 0.28
TTC39A-211ENST00000439482 ITSN2Q9NZM3 1697 aa16.82■□□□□ 0.28
TTC39A-211ENST00000439482 RAB3GAP2Q9H2M9 1393 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms