RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 NUP160Q12769 1436 aa17.36■□□□□ 0.37
HLA-DMB-259ENST00000438510 GOLGA3Q08378 1498 aa17.35■□□□□ 0.37
HLA-DMB-259ENST00000438510 CLASP1Q7Z460 1538 aa17.33■□□□□ 0.37
HLA-DMB-259ENST00000438510 OSCARQ8IYS5 282 aa17.33■□□□□ 0.36
HLA-DMB-259ENST00000438510 IQGAP2Q13576 1575 aa17.29■□□□□ 0.36
HLA-DMB-259ENST00000438510 KIAA0586Q9BVV6 1533 aa17.28■□□□□ 0.36
HLA-DMB-259ENST00000438510 SHROOM2Q13796 1616 aa17.26■□□□□ 0.35
HLA-DMB-259ENST00000438510 UBTFP17480 764 aaKnown RBP17.2■□□□□ 0.34
HLA-DMB-259ENST00000438510 EHMT2Q96KQ7 1210 aa17.18■□□□□ 0.34
HLA-DMB-259ENST00000438510 UGGT2Q9NYU1 1516 aa17.17■□□□□ 0.34
HLA-DMB-259ENST00000438510 TNIKQ9UKE5 1360 aa17.14■□□□□ 0.33
HLA-DMB-259ENST00000438510 JPH4Q96JJ6 628 aa17.13■□□□□ 0.33
HLA-DMB-259ENST00000438510 SAMD9Q5K651 1589 aa17.12■□□□□ 0.33
HLA-DMB-259ENST00000438510 KIAA0556O60303 1618 aa17.12■□□□□ 0.33
HLA-DMB-259ENST00000438510 EFCAB5A4FU69 1503 aa17.11■□□□□ 0.33
HLA-DMB-259ENST00000438510 RIMBP3CA6NJZ7 1639 aa17.11■□□□□ 0.33
HLA-DMB-259ENST00000438510 RIMBP3BA6NNM3 1639 aa17.11■□□□□ 0.33
HLA-DMB-259ENST00000438510 RIMBP3Q9UFD9 1639 aa17.11■□□□□ 0.33
HLA-DMB-259ENST00000438510 PRG4Q92954 1404 aaPredicted RBP17.11■□□□□ 0.33
HLA-DMB-259ENST00000438510 ARHGEF11O15085 1522 aa17.11■□□□□ 0.33
HLA-DMB-259ENST00000438510 CARMIL2Q6F5E8 1435 aa17.1■□□□□ 0.33
HLA-DMB-259ENST00000438510 ERCC6L2Q5T890 1561 aa17.08■□□□□ 0.32
HLA-DMB-259ENST00000438510 DISP1Q96F81 1524 aa17.07■□□□□ 0.32
HLA-DMB-259ENST00000438510 LOC105371045A0A1W2PR82 267 aa17.06■□□□□ 0.32
HLA-DMB-259ENST00000438510 CLIP1P30622 1438 aa17.01■□□□□ 0.31
HLA-DMB-259ENST00000438510 CEP162Q5TB80 1403 aa17.01■□□□□ 0.31
HLA-DMB-259ENST00000438510 ARHGAP35Q9NRY4 1499 aa17■□□□□ 0.31
HLA-DMB-259ENST00000438510 RANGAP1P46060 587 aaPredicted RBP17■□□□□ 0.31
HLA-DMB-259ENST00000438510 ARAP1Q96P48 1450 aa16.98■□□□□ 0.31
HLA-DMB-259ENST00000438510 FHOD3Q2V2M9 1422 aa16.96■□□□□ 0.3
HLA-DMB-259ENST00000438510 PTPRGP23470 1445 aa16.94■□□□□ 0.3
HLA-DMB-259ENST00000438510 P3H3Q8IVL6 736 aa16.92■□□□□ 0.3
HLA-DMB-259ENST00000438510 FMN1Q68DA7 1419 aa16.91■□□□□ 0.3
HLA-DMB-259ENST00000438510 RAPGEF6Q8TEU7 1601 aa16.89■□□□□ 0.29
HLA-DMB-259ENST00000438510 ABCA8O94911 1581 aa16.89■□□□□ 0.29
HLA-DMB-259ENST00000438510 TTBK1Q5TCY1 1321 aaPredicted RBP16.88■□□□□ 0.29
HLA-DMB-259ENST00000438510 ABCC2Q92887 1545 aa16.86■□□□□ 0.29
HLA-DMB-259ENST00000438510 ADCY10Q96PN6 1610 aa16.86■□□□□ 0.29
HLA-DMB-259ENST00000438510 UACAQ9BZF9 1416 aa16.86■□□□□ 0.29
HLA-DMB-259ENST00000438510 HECW1Q76N89 1606 aa16.85■□□□□ 0.29
HLA-DMB-259ENST00000438510 CYB5RLQ6IPT4 315 aa16.85■□□□□ 0.29
HLA-DMB-259ENST00000438510 UHRF1BP1LA0JNW5 1464 aa16.85■□□□□ 0.29
HLA-DMB-259ENST00000438510 PLB1Q6P1J6 1458 aa16.84■□□□□ 0.29
HLA-DMB-259ENST00000438510 PCF11O94913 1555 aaKnown RBP16.84■□□□□ 0.29
HLA-DMB-259ENST00000438510 FYCO1Q9BQS8 1478 aa16.81■□□□□ 0.28
HLA-DMB-259ENST00000438510 VPS8Q8N3P4 1428 aa16.79■□□□□ 0.28
HLA-DMB-259ENST00000438510 CASKIN1Q8WXD9 1431 aa16.79■□□□□ 0.28
HLA-DMB-259ENST00000438510 ZCCHC11Q5TAX3 1644 aaKnown RBP16.79■□□□□ 0.28
HLA-DMB-259ENST00000438510 LRRIQ1Q96JM4 1722 aa16.79■□□□□ 0.28
HLA-DMB-259ENST00000438510 NUP153P49790 1475 aaKnown RBP16.77■□□□□ 0.28
HLA-DMB-259ENST00000438510 KDM5BQ9UGL1 1544 aa16.76■□□□□ 0.27
HLA-DMB-259ENST00000438510 CCDC18Q5T9S5 1454 aa16.74■□□□□ 0.27
HLA-DMB-259ENST00000438510 CFAP43Q8NDM7 1665 aa16.72■□□□□ 0.27
HLA-DMB-259ENST00000438510 EPRSP07814 1512 aaKnown RBP16.72■□□□□ 0.27
HLA-DMB-259ENST00000438510 NPM1P06748 294 aaKnown RBP eCLIP16.72■□□□□ 0.27
HLA-DMB-259ENST00000438510 MAPKBP1O60336 1514 aa16.7■□□□□ 0.26
HLA-DMB-259ENST00000438510 ATP1B4Q9UN42 357 aaPredicted RBP16.7■□□□□ 0.26
HLA-DMB-259ENST00000438510 ATP10BO94823 1461 aa16.69■□□□□ 0.26
HLA-DMB-259ENST00000438510 CDK13Q14004 1512 aaKnown RBP16.69■□□□□ 0.26
HLA-DMB-259ENST00000438510 TIAM1Q13009 1591 aa16.66■□□□□ 0.26
HLA-DMB-259ENST00000438510 MAP3K1Q13233 1512 aa16.65■□□□□ 0.26
HLA-DMB-259ENST00000438510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.64■□□□□ 0.25
HLA-DMB-259ENST00000438510 HNRNPUL2Q1KMD3 747 aaKnown RBP16.64■□□□□ 0.25
HLA-DMB-259ENST00000438510 ARID3CA6NKF2 412 aa16.63■□□□□ 0.25
HLA-DMB-259ENST00000438510 ASXL2Q76L83 1435 aa16.62■□□□□ 0.25
HLA-DMB-259ENST00000438510 WDR7Q9Y4E6 1490 aa16.62■□□□□ 0.25
HLA-DMB-259ENST00000438510 CDK11AQ9UQ88 783 aaPredicted RBP16.61■□□□□ 0.25
HLA-DMB-259ENST00000438510 EHBP1L1Q8N3D4 1523 aa16.6■□□□□ 0.25
HLA-DMB-259ENST00000438510 APLP2Q06481 763 aa16.59■□□□□ 0.25
HLA-DMB-259ENST00000438510 KIF14Q15058 1648 aa16.59■□□□□ 0.25
HLA-DMB-259ENST00000438510 KIF13AQ9H1H9 1805 aa16.59■□□□□ 0.25
HLA-DMB-259ENST00000438510 TRHP20396 242 aaPredicted RBP16.58■□□□□ 0.24
HLA-DMB-259ENST00000438510 DIP2BQ9P265 1576 aa16.58■□□□□ 0.24
HLA-DMB-259ENST00000438510 PLEKHD1A6NEE1 506 aa16.57■□□□□ 0.24
HLA-DMB-259ENST00000438510 MAGI3Q5TCQ9 1506 aa16.56■□□□□ 0.24
HLA-DMB-259ENST00000438510 TROQ12816 1431 aaPredicted RBP16.56■□□□□ 0.24
HLA-DMB-259ENST00000438510 SUPT6HQ7KZ85 1726 aaKnown RBP16.55■□□□□ 0.24
HLA-DMB-259ENST00000438510 MTUS2Q5JR59 1369 aa16.54■□□□□ 0.24
HLA-DMB-259ENST00000438510 FOXD1Q16676 465 aa16.54■□□□□ 0.24
HLA-DMB-259ENST00000438510 GLI2P10070 1586 aa16.54■□□□□ 0.24
HLA-DMB-259ENST00000438510 ABCC10Q5T3U5 1492 aa16.54■□□□□ 0.24
HLA-DMB-259ENST00000438510 LRRC9Q6ZRR7 1453 aa16.54■□□□□ 0.24
HLA-DMB-259ENST00000438510 ABCA9Q8IUA7 1624 aa16.52■□□□□ 0.24
HLA-DMB-259ENST00000438510 MAP3K4Q9Y6R4 1608 aa16.51■□□□□ 0.23
HLA-DMB-259ENST00000438510 MYO5CQ9NQX4 1742 aa16.5■□□□□ 0.23
HLA-DMB-259ENST00000438510 TTC37Q6PGP7 1564 aa16.49■□□□□ 0.23
HLA-DMB-259ENST00000438510 ITSN2Q9NZM3 1697 aa16.49■□□□□ 0.23
HLA-DMB-259ENST00000438510 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.49■□□□□ 0.23
HLA-DMB-259ENST00000438510 KCNH8Q96L42 1107 aa16.47■□□□□ 0.23
HLA-DMB-259ENST00000438510 CDC42BPAQ5VT25 1732 aa16.47■□□□□ 0.23
HLA-DMB-259ENST00000438510 TSPOAP1O95153 1857 aa16.46■□□□□ 0.22
HLA-DMB-259ENST00000438510 PREX2Q70Z35 1606 aa16.45■□□□□ 0.22
HLA-DMB-259ENST00000438510 CFAP74Q9C0B2 1584 aa16.43■□□□□ 0.22
HLA-DMB-259ENST00000438510 NCOA2Q15596 1464 aa16.43■□□□□ 0.22
HLA-DMB-259ENST00000438510 FAM69CQ0P6D2 419 aa16.43■□□□□ 0.22
HLA-DMB-259ENST00000438510 KANK4Q5T7N3 995 aaPredicted RBP16.43■□□□□ 0.22
HLA-DMB-259ENST00000438510 CDC42BPBQ9Y5S2 1711 aa16.42■□□□□ 0.22
HLA-DMB-259ENST00000438510 ARAP3Q8WWN8 1544 aa16.41■□□□□ 0.22
HLA-DMB-259ENST00000438510 PPRC1Q5VV67 1664 aaKnown RBP16.41■□□□□ 0.22
HLA-DMB-259ENST00000438510 CD109Q6YHK3 1445 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms