RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 CSRNP3Q8WYN3 585 aa27.34■■□□□ 1.97
CTSD-205ENST00000438213 KIAA0586Q9BVV6 1533 aa27.31■■□□□ 1.96
CTSD-205ENST00000438213 EEA1Q15075 1411 aa27.31■■□□□ 1.96
CTSD-205ENST00000438213 ARAP1Q96P48 1450 aa27.28■■□□□ 1.96
CTSD-205ENST00000438213 PRG4Q92954 1404 aaPredicted RBP27.24■■□□□ 1.95
CTSD-205ENST00000438213 SHROOM2Q13796 1616 aa27.24■■□□□ 1.95
CTSD-205ENST00000438213 FAM9AQ8IZU1 332 aaPredicted RBP27.23■■□□□ 1.95
CTSD-205ENST00000438213 PRXQ9BXM0 1461 aa27.22■■□□□ 1.95
CTSD-205ENST00000438213 ERCC6L2Q5T890 1561 aa27.16■■□□□ 1.94
CTSD-205ENST00000438213 IQGAP2Q13576 1575 aa27.1■■□□□ 1.93
CTSD-205ENST00000438213 CARMIL2Q6F5E8 1435 aa27.07■■□□□ 1.92
CTSD-205ENST00000438213 UGGT2Q9NYU1 1516 aa26.97■■□□□ 1.91
CTSD-205ENST00000438213 PTPRGP23470 1445 aa26.97■■□□□ 1.91
CTSD-205ENST00000438213 TNIKQ9UKE5 1360 aa26.97■■□□□ 1.91
CTSD-205ENST00000438213 CTTNBP2Q8WZ74 1663 aa26.95■■□□□ 1.91
CTSD-205ENST00000438213 TTBK1Q5TCY1 1321 aaPredicted RBP26.93■■□□□ 1.9
CTSD-205ENST00000438213 DISP1Q96F81 1524 aa26.91■■□□□ 1.9
CTSD-205ENST00000438213 KIF21BO75037 1637 aa26.91■■□□□ 1.9
CTSD-205ENST00000438213 GOLGA3Q08378 1498 aa26.9■■□□□ 1.9
CTSD-205ENST00000438213 NPM1P06748 294 aaKnown RBP eCLIP26.89■■□□□ 1.9
CTSD-205ENST00000438213 UBTFP17480 764 aaKnown RBP26.88■■□□□ 1.89
CTSD-205ENST00000438213 TRHP20396 242 aaPredicted RBP26.86■■□□□ 1.89
CTSD-205ENST00000438213 EHMT2Q96KQ7 1210 aa26.86■■□□□ 1.89
CTSD-205ENST00000438213 KIAA0556O60303 1618 aa26.81■■□□□ 1.88
CTSD-205ENST00000438213 RANGAP1P46060 587 aaPredicted RBP26.78■■□□□ 1.88
CTSD-205ENST00000438213 P3H3Q8IVL6 736 aa26.77■■□□□ 1.88
CTSD-205ENST00000438213 UACAQ9BZF9 1416 aa26.74■■□□□ 1.87
CTSD-205ENST00000438213 ADCY10Q96PN6 1610 aa26.72■■□□□ 1.87
CTSD-205ENST00000438213 UHRF1BP1LA0JNW5 1464 aa26.69■■□□□ 1.86
CTSD-205ENST00000438213 ABCC2Q92887 1545 aa26.65■■□□□ 1.86
CTSD-205ENST00000438213 SAMD9Q5K651 1589 aa26.63■■□□□ 1.85
CTSD-205ENST00000438213 PLB1Q6P1J6 1458 aa26.6■■□□□ 1.85
CTSD-205ENST00000438213 EFCAB5A4FU69 1503 aa26.58■■□□□ 1.85
CTSD-205ENST00000438213 MAPKBP1O60336 1514 aa26.58■■□□□ 1.85
CTSD-205ENST00000438213 KDM5BQ9UGL1 1544 aa26.55■■□□□ 1.84
CTSD-205ENST00000438213 FHOD3Q2V2M9 1422 aa26.55■■□□□ 1.84
CTSD-205ENST00000438213 ABCA8O94911 1581 aa26.54■■□□□ 1.84
CTSD-205ENST00000438213 FAM69CQ0P6D2 419 aa26.54■■□□□ 1.84
CTSD-205ENST00000438213 ABCC10Q5T3U5 1492 aa26.5■■□□□ 1.83
CTSD-205ENST00000438213 ASXL2Q76L83 1435 aa26.49■■□□□ 1.83
CTSD-205ENST00000438213 ARHGAP35Q9NRY4 1499 aa26.45■■□□□ 1.82
CTSD-205ENST00000438213 ZCCHC11Q5TAX3 1644 aaKnown RBP26.43■■□□□ 1.82
CTSD-205ENST00000438213 ARID3CA6NKF2 412 aa26.43■■□□□ 1.82
CTSD-205ENST00000438213 FMN1Q68DA7 1419 aa26.41■■□□□ 1.82
CTSD-205ENST00000438213 RAPGEF6Q8TEU7 1601 aa26.41■■□□□ 1.82
CTSD-205ENST00000438213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.41■■□□□ 1.82
CTSD-205ENST00000438213 HNRNPUL2Q1KMD3 747 aaKnown RBP26.41■■□□□ 1.82
CTSD-205ENST00000438213 ATP10BO94823 1461 aa26.39■■□□□ 1.82
CTSD-205ENST00000438213 LOC105371045A0A1W2PR82 267 aa26.38■■□□□ 1.81
CTSD-205ENST00000438213 DIP2BQ9P265 1576 aa26.37■■□□□ 1.81
CTSD-205ENST00000438213 KIF13AQ9H1H9 1805 aa26.37■■□□□ 1.81
CTSD-205ENST00000438213 ATP1B4Q9UN42 357 aaPredicted RBP26.36■■□□□ 1.81
CTSD-205ENST00000438213 CLIP1P30622 1438 aa26.36■■□□□ 1.81
CTSD-205ENST00000438213 KCNH8Q96L42 1107 aa26.35■■□□□ 1.81
CTSD-205ENST00000438213 WDR7Q9Y4E6 1490 aa26.35■■□□□ 1.81
CTSD-205ENST00000438213 NUP153P49790 1475 aaKnown RBP26.33■■□□□ 1.81
CTSD-205ENST00000438213 EPRSP07814 1512 aaKnown RBP26.31■■□□□ 1.8
CTSD-205ENST00000438213 PLEKHD1A6NEE1 506 aa26.3■■□□□ 1.8
CTSD-205ENST00000438213 GLI2P10070 1586 aa26.29■■□□□ 1.8
CTSD-205ENST00000438213 CEP162Q5TB80 1403 aa26.22■■□□□ 1.79
CTSD-205ENST00000438213 CDK11AQ9UQ88 783 aaPredicted RBP26.22■■□□□ 1.79
CTSD-205ENST00000438213 HECW1Q76N89 1606 aa26.19■■□□□ 1.78
CTSD-205ENST00000438213 TSPOAP1O95153 1857 aa26.17■■□□□ 1.78
CTSD-205ENST00000438213 CASKIN1Q8WXD9 1431 aa26.17■■□□□ 1.78
CTSD-205ENST00000438213 CD109Q6YHK3 1445 aa26.16■■□□□ 1.78
CTSD-205ENST00000438213 CDK13Q14004 1512 aaKnown RBP26.13■■□□□ 1.77
CTSD-205ENST00000438213 MAP3K4Q9Y6R4 1608 aa26.11■■□□□ 1.77
CTSD-205ENST00000438213 TEX14Q8IWB6 1497 aa26.11■■□□□ 1.77
CTSD-205ENST00000438213 FYCO1Q9BQS8 1478 aa26.08■■□□□ 1.77
CTSD-205ENST00000438213 CFAP43Q8NDM7 1665 aa26.08■■□□□ 1.77
CTSD-205ENST00000438213 CCDC18Q5T9S5 1454 aa26.06■■□□□ 1.76
CTSD-205ENST00000438213 MAGI3Q5TCQ9 1506 aa26.06■■□□□ 1.76
CTSD-205ENST00000438213 PCF11O94913 1555 aaKnown RBP26.06■■□□□ 1.76
CTSD-205ENST00000438213 ABCA9Q8IUA7 1624 aa26.03■■□□□ 1.76
CTSD-205ENST00000438213 PPRC1Q5VV67 1664 aaKnown RBP26.03■■□□□ 1.76
CTSD-205ENST00000438213 TROQ12816 1431 aaPredicted RBP25.99■■□□□ 1.75
CTSD-205ENST00000438213 KDM6BO15054 1643 aa25.98■■□□□ 1.75
CTSD-205ENST00000438213 PHLDB1Q86UU1 1377 aa25.96■■□□□ 1.75
CTSD-205ENST00000438213 LRRIQ1Q96JM4 1722 aa25.94■■□□□ 1.74
CTSD-205ENST00000438213 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.93■■□□□ 1.747e-8■■□□□ 11.9
CTSD-205ENST00000438213 VPS8Q8N3P4 1428 aa25.91■■□□□ 1.74
CTSD-205ENST00000438213 NEO1Q92859 1461 aa25.88■■□□□ 1.73
CTSD-205ENST00000438213 COL17A1Q9UMD9 1497 aaPredicted RBP25.88■■□□□ 1.73
CTSD-205ENST00000438213 KIF14Q15058 1648 aa25.87■■□□□ 1.73
CTSD-205ENST00000438213 PLCH2O75038 1416 aa25.87■■□□□ 1.73
CTSD-205ENST00000438213 MTUS2Q5JR59 1369 aa25.86■■□□□ 1.73
CTSD-205ENST00000438213 EFCAB2Q5VUJ9 269 aa25.86■■□□□ 1.73
CTSD-205ENST00000438213 TTC37Q6PGP7 1564 aa25.85■■□□□ 1.73
CTSD-205ENST00000438213 ARAP3Q8WWN8 1544 aa25.83■■□□□ 1.73
CTSD-205ENST00000438213 FANCAO15360 1455 aa25.83■■□□□ 1.73
CTSD-205ENST00000438213 AKNAQ7Z591 1439 aa25.8■■□□□ 1.72
CTSD-205ENST00000438213 APLP2Q06481 763 aa25.79■■□□□ 1.72
CTSD-205ENST00000438213 RAPGEF3O95398 923 aa25.76■■□□□ 1.71
CTSD-205ENST00000438213 CFAP74Q9C0B2 1584 aa25.76■■□□□ 1.71
CTSD-205ENST00000438213 MYO5CQ9NQX4 1742 aa25.74■■□□□ 1.71
CTSD-205ENST00000438213 ARHGAP5Q13017 1502 aa25.72■■□□□ 1.71
CTSD-205ENST00000438213 DENND4BO75064 1496 aaPredicted RBP25.72■■□□□ 1.71
CTSD-205ENST00000438213 CCNB3Q8WWL7 1395 aa25.7■■□□□ 1.71
CTSD-205ENST00000438213 EHBP1L1Q8N3D4 1523 aa25.7■■□□□ 1.7
CTSD-205ENST00000438213 TIAM1Q13009 1591 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms