RNA–Protein interactions for RNA: ENST00000438191.1

RPE-209, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-209ENST00000438191 FGD5Q6ZNL6 1462 aa18.03■□□□□ 0.48
RPE-209ENST00000438191 NPM1P06748 294 aaKnown RBP eCLIP17.99■□□□□ 0.47
RPE-209ENST00000438191 NUP160Q12769 1436 aa17.98■□□□□ 0.47
RPE-209ENST00000438191 GRIN2AQ12879 1464 aa17.98■□□□□ 0.47
RPE-209ENST00000438191 ADCY10Q96PN6 1610 aa17.9■□□□□ 0.46
RPE-209ENST00000438191 PRG4Q92954 1404 aaPredicted RBP17.89■□□□□ 0.46
RPE-209ENST00000438191 PPRC1Q5VV67 1664 aaKnown RBP17.88■□□□□ 0.45
RPE-209ENST00000438191 ABCA5Q8WWZ7 1642 aa17.87■□□□□ 0.45
RPE-209ENST00000438191 TOP2BQ02880 1626 aa17.87■□□□□ 0.45
RPE-209ENST00000438191 COL17A1Q9UMD9 1497 aaPredicted RBP17.84■□□□□ 0.45
RPE-209ENST00000438191 CUX1P39880 1505 aa17.82■□□□□ 0.44
RPE-209ENST00000438191 ADAMTS12P58397 1594 aa17.82■□□□□ 0.44
RPE-209ENST00000438191 SPATA31D1Q6ZQQ2 1576 aa17.79■□□□□ 0.44
RPE-209ENST00000438191 JPH4Q96JJ6 628 aa17.77■□□□□ 0.44
RPE-209ENST00000438191 ABCA10Q8WWZ4 1543 aa17.77■□□□□ 0.43
RPE-209ENST00000438191 GLI2P10070 1586 aa17.73■□□□□ 0.43
RPE-209ENST00000438191 CERKQ8TCT0 537 aa17.7■□□□□ 0.42
RPE-209ENST00000438191 FHAD1B1AJZ9 1412 aa17.69■□□□□ 0.42
RPE-209ENST00000438191 PCF11O94913 1555 aaKnown RBP17.62■□□□□ 0.41
RPE-209ENST00000438191 RUSC2Q8N2Y8 1516 aa17.61■□□□□ 0.41
RPE-209ENST00000438191 PLB1Q6P1J6 1458 aa17.6■□□□□ 0.41
RPE-209ENST00000438191 MAP3K4Q9Y6R4 1608 aa17.6■□□□□ 0.41
RPE-209ENST00000438191 PTPRMP28827 1452 aa17.59■□□□□ 0.41
RPE-209ENST00000438191 ASXL2Q76L83 1435 aa17.59■□□□□ 0.41
RPE-209ENST00000438191 TEX14Q8IWB6 1497 aa17.58■□□□□ 0.41
RPE-209ENST00000438191 KIF21BO75037 1637 aa17.57■□□□□ 0.4
RPE-209ENST00000438191 ABCC2Q92887 1545 aa17.53■□□□□ 0.4
RPE-209ENST00000438191 ADAMTSL3P82987 1691 aa17.52■□□□□ 0.39
RPE-209ENST00000438191 ERICH3Q5RHP9 1530 aa17.51■□□□□ 0.39
RPE-209ENST00000438191 EPRSP07814 1512 aaKnown RBP17.5■□□□□ 0.39
RPE-209ENST00000438191 CUL7Q14999 1698 aa17.48■□□□□ 0.39
RPE-209ENST00000438191 KIAA0586Q9BVV6 1533 aa17.44■□□□□ 0.38
RPE-209ENST00000438191 HSPA2P54652 639 aa17.44■□□□□ 0.38
RPE-209ENST00000438191 PTPRGP23470 1445 aa17.43■□□□□ 0.38
RPE-209ENST00000438191 WRNQ14191 1432 aaPredicted RBP eCLIP17.4■□□□□ 0.38
RPE-209ENST00000438191 UHRF1BP1LA0JNW5 1464 aa17.36■□□□□ 0.37
RPE-209ENST00000438191 MADDQ8WXG6 1647 aa17.36■□□□□ 0.37
RPE-209ENST00000438191 TTBK1Q5TCY1 1321 aaPredicted RBP17.34■□□□□ 0.37
RPE-209ENST00000438191 BCORL1Q5H9F3 1711 aa17.33■□□□□ 0.37
RPE-209ENST00000438191 MAGI3Q5TCQ9 1506 aa17.31■□□□□ 0.36
RPE-209ENST00000438191 KDM5BQ9UGL1 1544 aa17.3■□□□□ 0.36
RPE-209ENST00000438191 TNIKQ9UKE5 1360 aa17.29■□□□□ 0.36
RPE-209ENST00000438191 UACAQ9BZF9 1416 aa17.27■□□□□ 0.35
RPE-209ENST00000438191 RIMS1Q86UR5 1692 aaKnown RBP17.26■□□□□ 0.35
RPE-209ENST00000438191 ZCCHC11Q5TAX3 1644 aaKnown RBP17.26■□□□□ 0.35
RPE-209ENST00000438191 CFAP43Q8NDM7 1665 aa17.25■□□□□ 0.35
RPE-209ENST00000438191 CD109Q6YHK3 1445 aa17.24■□□□□ 0.35
RPE-209ENST00000438191 BIVM-ERCC5R4GMW8 1640 aa17.21■□□□□ 0.35
RPE-209ENST00000438191 ARAP3Q8WWN8 1544 aa17.21■□□□□ 0.34
RPE-209ENST00000438191 WDR7Q9Y4E6 1490 aa17.2■□□□□ 0.34
RPE-209ENST00000438191 CARMIL2Q6F5E8 1435 aa17.2■□□□□ 0.34
RPE-209ENST00000438191 ARID4BQ4LE39 1312 aaPredicted RBP17.15■□□□□ 0.34
RPE-209ENST00000438191 STRCQ7RTU9 1775 aa17.15■□□□□ 0.34
RPE-209ENST00000438191 YEATS2Q9ULM3 1422 aa17.13■□□□□ 0.33
RPE-209ENST00000438191 IQSEC2Q5JU85 1478 aa17.12■□□□□ 0.33
RPE-209ENST00000438191 PLPPR3Q6T4P5 718 aa17.12■□□□□ 0.33
RPE-209ENST00000438191 DMRT2Q9Y5R5 561 aa17.12■□□□□ 0.33
RPE-209ENST00000438191 MED1Q15648 1581 aaPredicted RBP17.09■□□□□ 0.33
RPE-209ENST00000438191 LTBP4Q8N2S1 1624 aa17.09■□□□□ 0.33
RPE-209ENST00000438191 KCNH8Q96L42 1107 aa17.05■□□□□ 0.32
RPE-209ENST00000438191 DISP1Q96F81 1524 aa17.05■□□□□ 0.32
RPE-209ENST00000438191 PREX1Q8TCU6 1659 aa17.04■□□□□ 0.32
RPE-209ENST00000438191 RAPGEF3O95398 923 aa17.04■□□□□ 0.32
RPE-209ENST00000438191 PTPRTO14522 1441 aa17.02■□□□□ 0.31
RPE-209ENST00000438191 FRMPD1Q5SYB0 1578 aa17.02■□□□□ 0.31
RPE-209ENST00000438191 PHLDB1Q86UU1 1377 aa17.01■□□□□ 0.31
RPE-209ENST00000438191 IQGAP2Q13576 1575 aa17■□□□□ 0.31
RPE-209ENST00000438191 TTC37Q6PGP7 1564 aa16.98■□□□□ 0.31
RPE-209ENST00000438191 IGF1RP08069 1367 aa16.98■□□□□ 0.31
RPE-209ENST00000438191 ARHGEF40Q8TER5 1519 aa16.97■□□□□ 0.31
RPE-209ENST00000438191 FER1L4A9Z1Z3 1794 aa16.94■□□□□ 0.3
RPE-209ENST00000438191 POGZQ7Z3K3 1410 aa16.94■□□□□ 0.3
RPE-209ENST00000438191 UBAP1LF5GYI3 381 aa16.93■□□□□ 0.3
RPE-209ENST00000438191 SIGLEC1Q9BZZ2 1709 aa16.93■□□□□ 0.3
RPE-209ENST00000438191 FANCAO15360 1455 aa16.91■□□□□ 0.3
RPE-209ENST00000438191 NEO1Q92859 1461 aa16.9■□□□□ 0.3
RPE-209ENST00000438191 KIAA0556O60303 1618 aa16.88■□□□□ 0.29
RPE-209ENST00000438191 PHF23Q9BUL5 403 aaPredicted RBP16.88■□□□□ 0.29
RPE-209ENST00000438191 ABCA9Q8IUA7 1624 aa16.87■□□□□ 0.29
RPE-209ENST00000438191 UGGT2Q9NYU1 1516 aa16.86■□□□□ 0.29
RPE-209ENST00000438191 UHRF1BP1Q6BDS2 1440 aa16.86■□□□□ 0.29
RPE-209ENST00000438191 HSPA1LP34931 641 aa16.85■□□□□ 0.29
RPE-209ENST00000438191 CEBPAP49715 358 aaPredicted RBP16.83■□□□□ 0.28
RPE-209ENST00000438191 MLECQ14165 292 aa16.83■□□□□ 0.28
RPE-209ENST00000438191 RICTORQ6R327 1708 aa16.83■□□□□ 0.28
RPE-209ENST00000438191 ABCA8O94911 1581 aa16.82■□□□□ 0.28
RPE-209ENST00000438191 AKNAQ7Z591 1439 aa16.82■□□□□ 0.28
RPE-209ENST00000438191 SETD1BQ9UPS6 1966 aaKnown RBP16.82■□□□□ 0.28
RPE-209ENST00000438191 CARMIL1Q5VZK9 1371 aa16.81■□□□□ 0.28
RPE-209ENST00000438191 ARHGEF12Q9NZN5 1544 aa16.8■□□□□ 0.28
RPE-209ENST00000438191 KIF27Q86VH2 1401 aa16.78■□□□□ 0.28
RPE-209ENST00000438191 DENND4BO75064 1496 aaPredicted RBP16.76■□□□□ 0.27
RPE-209ENST00000438191 FHOD3Q2V2M9 1422 aa16.76■□□□□ 0.27
RPE-209ENST00000438191 ZFYVE16Q7Z3T8 1539 aa16.75■□□□□ 0.27
RPE-209ENST00000438191 ZNF335Q9H4Z2 1342 aaPredicted RBP16.74■□□□□ 0.27
RPE-209ENST00000438191 NCOA1Q15788 1441 aa16.74■□□□□ 0.27
RPE-209ENST00000438191 ZMYM4Q5VZL5 1548 aa16.74■□□□□ 0.27
RPE-209ENST00000438191 EFCAB5A4FU69 1503 aa16.73■□□□□ 0.27
RPE-209ENST00000438191 SCAF1Q9H7N4 1312 aaKnown RBP16.7■□□□□ 0.26
RPE-209ENST00000438191 PIP4K2BP78356 416 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms