RNA–Protein interactions for RNA: ENST00000438014.5

R3HDM1-208, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-208ENST00000438014 SOGA1O94964 1423 aa15.53■□□□□ 0.08
R3HDM1-208ENST00000438014 FKBP8Q14318 412 aa15.52■□□□□ 0.08
R3HDM1-208ENST00000438014 CLASP1Q7Z460 1538 aa15.52■□□□□ 0.07
R3HDM1-208ENST00000438014 SYNJ1O43426 1573 aa15.51■□□□□ 0.07
R3HDM1-208ENST00000438014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
R3HDM1-208ENST00000438014 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
R3HDM1-208ENST00000438014 SNAPC4Q5SXM2 1469 aa15.5■□□□□ 0.07
R3HDM1-208ENST00000438014 RAD54L2Q9Y4B4 1467 aa15.5■□□□□ 0.07
R3HDM1-208ENST00000438014 SAMD1Q6SPF0 538 aaPredicted RBP15.47■□□□□ 0.07
R3HDM1-208ENST00000438014 GAPVD1Q14C86 1478 aa15.46■□□□□ 0.07
R3HDM1-208ENST00000438014 MAGI1Q96QZ7 1491 aaPredicted RBP15.46■□□□□ 0.07
R3HDM1-208ENST00000438014 ATF5Q9Y2D1 282 aaPredicted RBP15.44■□□□□ 0.06
R3HDM1-208ENST00000438014 WDR97A6NE52 1622 aa15.43■□□□□ 0.06
R3HDM1-208ENST00000438014 GRIN2BQ13224 1484 aa15.43■□□□□ 0.06
R3HDM1-208ENST00000438014 SYNJ2O15056 1496 aa15.42■□□□□ 0.06
R3HDM1-208ENST00000438014 U3KPZ7 1027 aaPredicted RBP15.42■□□□□ 0.06
R3HDM1-208ENST00000438014 AMER1Q5JTC6 1135 aaPredicted RBP15.4■□□□□ 0.06
R3HDM1-208ENST00000438014 FGD5Q6ZNL6 1462 aa15.36■□□□□ 0.05
R3HDM1-208ENST00000438014 RTN4Q9NQC3 1192 aaKnown RBP15.36■□□□□ 0.05
R3HDM1-208ENST00000438014 CUX1P39880 1505 aa15.24■□□□□ 0.03
R3HDM1-208ENST00000438014 FAM69CQ0P6D2 419 aa15.22■□□□□ 0.03
R3HDM1-208ENST00000438014 ERCC6L2Q5T890 1561 aa15.21■□□□□ 0.03
R3HDM1-208ENST00000438014 NPM1P06748 294 aaKnown RBP eCLIP15.21■□□□□ 0.03
R3HDM1-208ENST00000438014 KDM4FA0A1W2PPD8 638 aa15.2■□□□□ 0.02
R3HDM1-208ENST00000438014 GRIN2AQ12879 1464 aa15.2■□□□□ 0.02
R3HDM1-208ENST00000438014 CEP170Q5SW79 1584 aa15.19■□□□□ 0.02
R3HDM1-208ENST00000438014 ABCA10Q8WWZ4 1543 aa15.18■□□□□ 0.02
R3HDM1-208ENST00000438014 APLP2Q06481 763 aa15.18■□□□□ 0.02
R3HDM1-208ENST00000438014 PBRM1Q86U86 1689 aa15.18■□□□□ 0.02
R3HDM1-208ENST00000438014 NUP160Q12769 1436 aa15.17■□□□□ 0.02
R3HDM1-208ENST00000438014 ZNF219Q9P2Y4 722 aaPredicted RBP15.14■□□□□ 0.01
R3HDM1-208ENST00000438014 ABCC10Q5T3U5 1492 aa15.14■□□□□ 0.01
R3HDM1-208ENST00000438014 JPH4Q96JJ6 628 aa15.13■□□□□ 0.01
R3HDM1-208ENST00000438014 KIF13AQ9H1H9 1805 aa15.13■□□□□ 0.01
R3HDM1-208ENST00000438014 ABCA5Q8WWZ7 1642 aa15.12■□□□□ 0.01
R3HDM1-208ENST00000438014 FHAD1B1AJZ9 1412 aa15.11■□□□□ 0.01
R3HDM1-208ENST00000438014 PRG4Q92954 1404 aaPredicted RBP15.11■□□□□ 0.01
R3HDM1-208ENST00000438014 SHROOM2Q13796 1616 aa15.09■□□□□ 0.01
R3HDM1-208ENST00000438014 WRNQ14191 1432 aaPredicted RBP eCLIP15.08■□□□□ 0
R3HDM1-208ENST00000438014 ADAMTS12P58397 1594 aa15.06■□□□□ 0
R3HDM1-208ENST00000438014 SLC24A1O60721 1099 aa15.04■□□□□ -0
R3HDM1-208ENST00000438014 MAPKBP1O60336 1514 aa15.03■□□□□ -0
R3HDM1-208ENST00000438014 KDM6BO15054 1643 aa15.03■□□□□ -0
R3HDM1-208ENST00000438014 DIP2BQ9P265 1576 aa14.98□□□□□ -0.01
R3HDM1-208ENST00000438014 ERICH3Q5RHP9 1530 aa14.97□□□□□ -0.01
R3HDM1-208ENST00000438014 ADCY10Q96PN6 1610 aa14.9□□□□□ -0.02
R3HDM1-208ENST00000438014 ADGRL1O94910 1474 aa14.89□□□□□ -0.03
R3HDM1-208ENST00000438014 TSPOAP1O95153 1857 aa14.87□□□□□ -0.03
R3HDM1-208ENST00000438014 TOP2BQ02880 1626 aa14.86□□□□□ -0.03
R3HDM1-208ENST00000438014 SOCS7O14512 581 aa14.86□□□□□ -0.03
R3HDM1-208ENST00000438014 PTPRGP23470 1445 aa14.84□□□□□ -0.03
R3HDM1-208ENST00000438014 LMTK3Q96Q04 1460 aa14.84□□□□□ -0.03
R3HDM1-208ENST00000438014 KIAA0586Q9BVV6 1533 aa14.84□□□□□ -0.03
R3HDM1-208ENST00000438014 SPDYE4A6NLX3 237 aa14.84□□□□□ -0.03
R3HDM1-208ENST00000438014 FBXO41Q8TF61 875 aa14.84□□□□□ -0.03
R3HDM1-208ENST00000438014 RUSC2Q8N2Y8 1516 aa14.83□□□□□ -0.04
R3HDM1-208ENST00000438014 BIVM-ERCC5R4GMW8 1640 aa14.82□□□□□ -0.04
R3HDM1-208ENST00000438014 PLB1Q6P1J6 1458 aa14.82□□□□□ -0.04
R3HDM1-208ENST00000438014 HECW2Q9P2P5 1572 aa14.81□□□□□ -0.04
R3HDM1-208ENST00000438014 MKRN4PQ13434 485 aaPredicted RBP14.81□□□□□ -0.04
R3HDM1-208ENST00000438014 FBXO3Q9UK99 471 aa14.8□□□□□ -0.04
R3HDM1-208ENST00000438014 TTBK1Q5TCY1 1321 aaPredicted RBP14.8□□□□□ -0.04
R3HDM1-208ENST00000438014 ASXL2Q76L83 1435 aa14.79□□□□□ -0.04
R3HDM1-208ENST00000438014 SPINK5Q9NQ38 1064 aaPredicted RBP14.78□□□□□ -0.04
R3HDM1-208ENST00000438014 GLI2P10070 1586 aa14.77□□□□□ -0.04
R3HDM1-208ENST00000438014 ABCC2Q92887 1545 aa14.76□□□□□ -0.05
R3HDM1-208ENST00000438014 TNIKQ9UKE5 1360 aa14.76□□□□□ -0.05
R3HDM1-208ENST00000438014 ILDR2Q71H61 639 aa14.76□□□□□ -0.05
R3HDM1-208ENST00000438014 CARMIL2Q6F5E8 1435 aa14.75□□□□□ -0.05
R3HDM1-208ENST00000438014 RNF39Q9H2S5 420 aa14.75□□□□□ -0.05
R3HDM1-208ENST00000438014 COL17A1Q9UMD9 1497 aaPredicted RBP14.74□□□□□ -0.05
R3HDM1-208ENST00000438014 SUPT5HO00267 1087 aaKnown RBP14.73□□□□□ -0.05
R3HDM1-208ENST00000438014 TEX14Q8IWB6 1497 aa14.73□□□□□ -0.05
R3HDM1-208ENST00000438014 IGF1RP08069 1367 aa14.73□□□□□ -0.05
R3HDM1-208ENST00000438014 POLA2Q14181 598 aa14.72□□□□□ -0.05
R3HDM1-208ENST00000438014 CAPN15O75808 1086 aa14.71□□□□□ -0.05
R3HDM1-208ENST00000438014 UHRF1BP1LA0JNW5 1464 aa14.69□□□□□ -0.06
R3HDM1-208ENST00000438014 UACAQ9BZF9 1416 aa14.69□□□□□ -0.06
R3HDM1-208ENST00000438014 PPRC1Q5VV67 1664 aaKnown RBP14.69□□□□□ -0.06
R3HDM1-208ENST00000438014 EPRSP07814 1512 aaKnown RBP14.67□□□□□ -0.06
R3HDM1-208ENST00000438014 PROM2Q8N271 834 aa14.67□□□□□ -0.06
R3HDM1-208ENST00000438014 KIF27Q86VH2 1401 aa14.66□□□□□ -0.06
R3HDM1-208ENST00000438014 CARMIL1Q5VZK9 1371 aa14.63□□□□□ -0.07
R3HDM1-208ENST00000438014 C1QBPQ07021 282 aaKnown RBP14.63□□□□□ -0.07
R3HDM1-208ENST00000438014 KDM5BQ9UGL1 1544 aa14.61□□□□□ -0.07
R3HDM1-208ENST00000438014 MAP3K4Q9Y6R4 1608 aa14.61□□□□□ -0.07
R3HDM1-208ENST00000438014 CUL7Q14999 1698 aa14.61□□□□□ -0.07
R3HDM1-208ENST00000438014 VASPP50552 380 aaPredicted RBP14.56□□□□□ -0.08
R3HDM1-208ENST00000438014 CD109Q6YHK3 1445 aa14.56□□□□□ -0.08
R3HDM1-208ENST00000438014 KCNH8Q96L42 1107 aa14.55□□□□□ -0.08
R3HDM1-208ENST00000438014 ZBTB12Q9Y330 459 aaPredicted RBP14.55□□□□□ -0.08
R3HDM1-208ENST00000438014 WDR7Q9Y4E6 1490 aa14.54□□□□□ -0.08
R3HDM1-208ENST00000438014 MAGI3Q5TCQ9 1506 aa14.54□□□□□ -0.08
R3HDM1-208ENST00000438014 IQGAP2Q13576 1575 aa14.54□□□□□ -0.08
R3HDM1-208ENST00000438014 DISP1Q96F81 1524 aa14.53□□□□□ -0.08
R3HDM1-208ENST00000438014 ZCCHC11Q5TAX3 1644 aaKnown RBP14.5□□□□□ -0.09
R3HDM1-208ENST00000438014 ABCB7O75027 752 aa14.49□□□□□ -0.09
R3HDM1-208ENST00000438014 PTPRMP28827 1452 aa14.49□□□□□ -0.09
R3HDM1-208ENST00000438014 DISP3Q9P2K9 1392 aa14.48□□□□□ -0.09
R3HDM1-208ENST00000438014 UGGT2Q9NYU1 1516 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms