RNA–Protein interactions for RNA: ENST00000437900.1

LINC01007-202, Transcript of long intergenic non-protein coding RNA 1007, humanhuman

TSL 1 (best)

Gene LINC01007, Length 1,485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01007-202ENST00000437900 KIAA0586Q9BVV6 1533 aa22.97■■□□□ 1.27
LINC01007-202ENST00000437900 CEP170Q5SW79 1584 aa22.96■■□□□ 1.27
LINC01007-202ENST00000437900 FBLN2P98095 1184 aa22.96■■□□□ 1.27
LINC01007-202ENST00000437900 CHD1O14646 1710 aa22.96■■□□□ 1.27
LINC01007-202ENST00000437900 CLIP1P30622 1438 aa22.96■■□□□ 1.27
LINC01007-202ENST00000437900 IQGAP2Q13576 1575 aa22.93■■□□□ 1.26
LINC01007-202ENST00000437900 EFCAB5A4FU69 1503 aa22.87■■□□□ 1.25
LINC01007-202ENST00000437900 UGGT2Q9NYU1 1516 aa22.86■■□□□ 1.25
LINC01007-202ENST00000437900 ARHGAP35Q9NRY4 1499 aa22.86■■□□□ 1.25
LINC01007-202ENST00000437900 SAMD9Q5K651 1589 aa22.82■■□□□ 1.24
LINC01007-202ENST00000437900 CLASP1Q7Z460 1538 aa22.79■■□□□ 1.24
LINC01007-202ENST00000437900 ARAP1Q96P48 1450 aa22.78■■□□□ 1.24
LINC01007-202ENST00000437900 RANGAP1P46060 587 aaPredicted RBP22.77■■□□□ 1.24
LINC01007-202ENST00000437900 SHROOM2Q13796 1616 aa22.74■■□□□ 1.23
LINC01007-202ENST00000437900 JPH4Q96JJ6 628 aa22.73■■□□□ 1.23
LINC01007-202ENST00000437900 DISP1Q96F81 1524 aa22.73■■□□□ 1.23
LINC01007-202ENST00000437900 VPS8Q8N3P4 1428 aa22.72■■□□□ 1.23
LINC01007-202ENST00000437900 KIAA0556O60303 1618 aa22.7■■□□□ 1.22
LINC01007-202ENST00000437900 OSCARQ8IYS5 282 aa22.69■■□□□ 1.22
LINC01007-202ENST00000437900 FHOD3Q2V2M9 1422 aa22.68■■□□□ 1.22
LINC01007-202ENST00000437900 CARMIL2Q6F5E8 1435 aa22.67■■□□□ 1.22
LINC01007-202ENST00000437900 FMN1Q68DA7 1419 aa22.64■■□□□ 1.21
LINC01007-202ENST00000437900 PRG4Q92954 1404 aaPredicted RBP22.64■■□□□ 1.21
LINC01007-202ENST00000437900 P3H3Q8IVL6 736 aa22.62■■□□□ 1.21
LINC01007-202ENST00000437900 CASKIN1Q8WXD9 1431 aa22.55■■□□□ 1.2
LINC01007-202ENST00000437900 FYCO1Q9BQS8 1478 aa22.54■■□□□ 1.2
LINC01007-202ENST00000437900 PCF11O94913 1555 aaKnown RBP22.52■■□□□ 1.2
LINC01007-202ENST00000437900 ERCC6L2Q5T890 1561 aa22.5■■□□□ 1.19
LINC01007-202ENST00000437900 PTPRGP23470 1445 aa22.47■■□□□ 1.19
LINC01007-202ENST00000437900 MAP3K1Q13233 1512 aa22.46■■□□□ 1.19
LINC01007-202ENST00000437900 HECW1Q76N89 1606 aa22.42■■□□□ 1.18
LINC01007-202ENST00000437900 ABCA8O94911 1581 aa22.42■■□□□ 1.18
LINC01007-202ENST00000437900 RAPGEF6Q8TEU7 1601 aa22.42■■□□□ 1.18
LINC01007-202ENST00000437900 APLP2Q06481 763 aa22.4■■□□□ 1.18
LINC01007-202ENST00000437900 PLB1Q6P1J6 1458 aa22.39■■□□□ 1.18
LINC01007-202ENST00000437900 TIAM1Q13009 1591 aa22.38■■□□□ 1.17
LINC01007-202ENST00000437900 NUP153P49790 1475 aaKnown RBP22.37■■□□□ 1.17
LINC01007-202ENST00000437900 CCDC18Q5T9S5 1454 aa22.37■■□□□ 1.17
LINC01007-202ENST00000437900 CFAP43Q8NDM7 1665 aa22.36■■□□□ 1.17
LINC01007-202ENST00000437900 UACAQ9BZF9 1416 aa22.35■■□□□ 1.17
LINC01007-202ENST00000437900 EPRSP07814 1512 aaKnown RBP22.35■■□□□ 1.17
LINC01007-202ENST00000437900 ARHGEF11O15085 1522 aa22.34■■□□□ 1.17
LINC01007-202ENST00000437900 TTBK1Q5TCY1 1321 aaPredicted RBP22.33■■□□□ 1.16
LINC01007-202ENST00000437900 LRRIQ1Q96JM4 1722 aa22.32■■□□□ 1.16
LINC01007-202ENST00000437900 UHRF1BP1LA0JNW5 1464 aa22.32■■□□□ 1.16
LINC01007-202ENST00000437900 ABCC2Q92887 1545 aa22.31■■□□□ 1.16
LINC01007-202ENST00000437900 ATP1B4Q9UN42 357 aaPredicted RBP22.3■■□□□ 1.16
LINC01007-202ENST00000437900 LRRC9Q6ZRR7 1453 aa22.28■■□□□ 1.16
LINC01007-202ENST00000437900 CDK13Q14004 1512 aaKnown RBP22.25■■□□□ 1.15
LINC01007-202ENST00000437900 KANK4Q5T7N3 995 aaPredicted RBP22.25■■□□□ 1.15
LINC01007-202ENST00000437900 ATP10BO94823 1461 aa22.23■■□□□ 1.15
LINC01007-202ENST00000437900 RIMBP3CA6NJZ7 1639 aa22.23■■□□□ 1.15
LINC01007-202ENST00000437900 RIMBP3BA6NNM3 1639 aa22.23■■□□□ 1.15
LINC01007-202ENST00000437900 RIMBP3Q9UFD9 1639 aa22.23■■□□□ 1.15
LINC01007-202ENST00000437900 KDM5BQ9UGL1 1544 aa22.21■■□□□ 1.15
LINC01007-202ENST00000437900 EHBP1L1Q8N3D4 1523 aa22.19■■□□□ 1.14
LINC01007-202ENST00000437900 ADCY10Q96PN6 1610 aa22.19■■□□□ 1.14
LINC01007-202ENST00000437900 PPARGC1BQ86YN6 1023 aaKnown RBP22.19■■□□□ 1.14
LINC01007-202ENST00000437900 MAGI3Q5TCQ9 1506 aa22.18■■□□□ 1.14
LINC01007-202ENST00000437900 MTUS2Q5JR59 1369 aa22.18■■□□□ 1.14
LINC01007-202ENST00000437900 CDK11AQ9UQ88 783 aaPredicted RBP22.17■■□□□ 1.14
LINC01007-202ENST00000437900 ARID3CA6NKF2 412 aa22.14■■□□□ 1.13
LINC01007-202ENST00000437900 TROQ12816 1431 aaPredicted RBP22.13■■□□□ 1.13
LINC01007-202ENST00000437900 ZCCHC11Q5TAX3 1644 aaKnown RBP22.11■■□□□ 1.13
LINC01007-202ENST00000437900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.1■■□□□ 1.13
LINC01007-202ENST00000437900 HNRNPUL2Q1KMD3 747 aaKnown RBP22.1■■□□□ 1.13
LINC01007-202ENST00000437900 SUPT6HQ7KZ85 1726 aaKnown RBP22.08■■□□□ 1.13
LINC01007-202ENST00000437900 PLEKHD1A6NEE1 506 aa22.08■■□□□ 1.12
LINC01007-202ENST00000437900 NCOA2Q15596 1464 aa22.06■■□□□ 1.12
LINC01007-202ENST00000437900 TRIM26Q12899 539 aaPredicted RBP22.06■■□□□ 1.12
LINC01007-202ENST00000437900 CYB5RLQ6IPT4 315 aa22.03■■□□□ 1.12
LINC01007-202ENST00000437900 PHLDB1Q86UU1 1377 aa22.03■■□□□ 1.12
LINC01007-202ENST00000437900 RRBP1Q9P2E9 1410 aaKnown RBP22■■□□□ 1.11
LINC01007-202ENST00000437900 KIF14Q15058 1648 aa22■■□□□ 1.11
LINC01007-202ENST00000437900 WDR7Q9Y4E6 1490 aa21.98■■□□□ 1.11
LINC01007-202ENST00000437900 NPM1P06748 294 aaKnown RBP eCLIP21.98■■□□□ 1.11
LINC01007-202ENST00000437900 MYOM3Q5VTT5 1437 aa21.97■■□□□ 1.11
LINC01007-202ENST00000437900 ABCC10Q5T3U5 1492 aa21.97■■□□□ 1.11
LINC01007-202ENST00000437900 ASXL2Q76L83 1435 aa21.95■■□□□ 1.1
LINC01007-202ENST00000437900 MAPKBP1O60336 1514 aa21.94■■□□□ 1.1
LINC01007-202ENST00000437900 FGD6Q6ZV73 1430 aa21.93■■□□□ 1.1
LINC01007-202ENST00000437900 CCNB3Q8WWL7 1395 aa21.92■■□□□ 1.1
LINC01007-202ENST00000437900 DNAJC5Q9H3Z4 198 aa21.92■■□□□ 1.1
LINC01007-202ENST00000437900 MIA2Q96PC5 1412 aa21.92■■□□□ 1.1
LINC01007-202ENST00000437900 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.91■■□□□ 1.1
LINC01007-202ENST00000437900 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.89■■□□□ 1.09
LINC01007-202ENST00000437900 GPATCH8Q9UKJ3 1502 aaKnown RBP21.89■■□□□ 1.09
LINC01007-202ENST00000437900 ITSN2Q9NZM3 1697 aa21.87■■□□□ 1.09
LINC01007-202ENST00000437900 TTC37Q6PGP7 1564 aa21.85■■□□□ 1.09
LINC01007-202ENST00000437900 PCGF6Q9BYE7 350 aa21.85■■□□□ 1.09
LINC01007-202ENST00000437900 TCOF1Q13428 1488 aaKnown RBP21.85■■□□□ 1.09
LINC01007-202ENST00000437900 CDC42BPAQ5VT25 1732 aa21.83■■□□□ 1.09
LINC01007-202ENST00000437900 KCNH8Q96L42 1107 aa21.83■■□□□ 1.08
LINC01007-202ENST00000437900 ABCA9Q8IUA7 1624 aa21.83■■□□□ 1.08
LINC01007-202ENST00000437900 PTPN23Q9H3S7 1636 aa21.82■■□□□ 1.08
LINC01007-202ENST00000437900 PREX2Q70Z35 1606 aa21.81■■□□□ 1.08
LINC01007-202ENST00000437900 ARAP3Q8WWN8 1544 aa21.8■■□□□ 1.08
LINC01007-202ENST00000437900 CFDP1Q9UEE9 299 aaPredicted RBP21.79■■□□□ 1.08
LINC01007-202ENST00000437900 MYO5CQ9NQX4 1742 aa21.78■■□□□ 1.08
LINC01007-202ENST00000437900 PLCH2O75038 1416 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms